Array 1 21672-19923 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMAC01000023.1 Streptococcus equi subsp. zooepidemicus strain ISU54026 contig023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 21671 32 100.0 35 ................................ CGTTTGGGTATAACATTAACGAGGAAGAGCATGAG 21604 32 100.0 33 ................................ ATTTAGCAATCCTCCATTATTTGCCTAACTTAA 21539 32 100.0 34 ................................ AGATACAACTGTAGTTGATACACTCCCTGCTTAC 21473 32 100.0 35 ................................ TGATGTTGGAGAGGGACTTATTGTTTACTCAGGAA 21406 32 100.0 35 ................................ CAAAGTAACTTATCTAACAGATAGTGCCAAAATTG 21339 32 100.0 34 ................................ CATAACCAATCGTTTTTTGACCGTCAATCATATC 21273 32 100.0 35 ................................ TTACCATCTGATGATACTACCCGATGCCAAACCTT 21206 32 100.0 35 ................................ GTAAAAAAATAAAGTTAAAAAGTATTGACAAAGGT 21139 32 100.0 33 ................................ CTTGTTATAAAGTTTTTTATCGTTGACAAACTC 21074 32 100.0 34 ................................ TTCAGCAGCAGCCATGGCGTCTGCAGCAGCTTGT 21008 32 100.0 35 ................................ ATGATAAGCTTACCTTTAGCTAAAGCTTGCGGAGA 20941 32 100.0 34 ................................ GCCAGCGTAATGAGCAGGCAAAAGCGGAAGCAGC 20875 32 100.0 34 ................................ TTCGAGAAGCGACTCCATTTTTTAAAAAGTTGGA 20809 32 100.0 33 ................................ TCCTGTTGGTGAATTTTATCTATGGGTAGCTAA 20744 32 100.0 33 ................................ GGTGAAGTGGCACGTGAATTTTATTCTCCGTTA 20679 32 100.0 35 ................................ CTGTCTTAGACACTTTATAAAAGTCTCTAAAGGAG 20612 32 84.4 34 ........C..TGC.......T.......... CAATTGCTCTTTGGCAAAGTCAAGGACTTTTTCC 20546 32 84.4 33 ........C..TGC.......T.......... CGATAATCCATTACCACCAAACTCAAACAGAGC 20481 32 81.2 33 ........CCAT.C.......T.......... GTTGTGGTATTGGTCTGATAACCATTTCCCCAA 20416 32 81.2 34 ........CCAT.C.......T.......... TTTTCAAATTGGTTAAAGTCTTACCCTCAAAATT 20350 32 81.2 33 ........CCAT.C.......T.......... ATTAGTCCCAGCATGGTAGAAACCAAAGAGATT 20285 32 81.2 33 ........CCAT.C.......T.......... TAAAGAAACTCAAACATGGACTAATAAGCTTTT 20220 32 81.2 33 ........CCAT.C.......T.......... TTTTCAGCCTCAGCCTTAGCTTGTACAGCTTGA 20155 32 81.2 35 ........CCAT.C.......T.......... TGATGAAGCTGCTACAAAGCGTAAGGAGGAGTTAG 20088 32 84.4 35 ........C..TGC.......T.......... TTTGGCATGCCTCACATCAGACTCATGTCTAGCAT 20021 32 84.4 35 ........C..TGC.......T.......... CCGACACTGCGAACTAATCATTTGTGACTCCTTTC 19954 32 84.4 0 ........C..TGC.......T.......... | ========== ====== ====== ====== ================================ =================================== ================== 27 32 92.9 34 GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Left flank : AAGGCTATTCGAGGGGATATTGATAGTTACCCACCTTTTATGATTTAGGAGACTGGTTGATGATGGTATTGGTTACTTATGATGTGAATACAGAAACAGCAGCAGGGCGAAAACGACTACGTCAGGTAGCAAAGTTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGGGTCACTCATAAAATGCTGTGAGACTCGCGTTAAAATAAGCTAAAAAATAGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA # Right flank : TTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGCCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAGA # Questionable array : NO Score: 8.90 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.99, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Alternate repeat : GTCTCGCCCCATACGGGCGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //