Array 1 416070-414423 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEYQ02000006.1 Serratia nematodiphila strain CRK0003 CRK0003_NODE_3.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 416069 28 92.9 32 ..G..........C.............. GTAGACCCAGCCACAGGAAATTGGTTGCCCGG 416009 28 92.9 32 ..G..........C.............. ATCGGTCGCGCCGAGACGGAACGACAAGAGAT 415949 28 92.9 32 ..G..........C.............. CACGGCCACGCGACCAATATCCGCCGCGGCAC 415889 28 92.9 32 ..G..........C.............. GCATCCATGACCGTCATCCCTTCGATACTTTG 415829 28 92.9 33 ..G..........C.............. ATCAGGGATTGCCCCAGCCCCTGGCGGTAAAGA 415768 28 92.9 32 ..G..........C.............. ATGAGCAGCGCGGAGTGCGCGCGGTATACAAC 415708 28 92.9 32 ..G..........C.............. TGTTCCGTCAGGGCGATGTGGCTGCCGCCTGC 415648 28 92.9 32 ..G..........C.............. TTGTGAGTTGTATCCTCCGCCCCAGGAGAAAT 415588 28 96.4 32 ..G......................... AGCGCAACCAGCGCGCCGACAAAGAACAGATC 415528 28 100.0 32 ............................ TATCGAATTCATATAACTACCCTCCACACCAC 415468 28 100.0 32 ............................ CACACCCATGGGTTGGCGTTCCAGCTATCAAC 415408 28 100.0 32 ............................ CGTAGCCGGGGATGTTGACATCCGTGTTTTCA 415348 28 100.0 32 ............................ AGTGCAGCGACAGCGGTCATCACGGCCGCTGT 415288 28 100.0 32 ............................ AAGGCCGCCGCAATGCGCGCCGCACAGGCCAA 415228 28 100.0 31 ............................ ACTCCGGGAAAATTACCGACAGCTATATCCG 415169 28 100.0 32 ............................ TCGTAGGCGTGCGCAATCTTCCCGCGCTGTCC 415109 28 100.0 32 ............................ GGTGTGATGGCCATCGGTGCGTGATACAGCCC 415049 28 100.0 32 ............................ GGAGTCTGTTTCATTCGGCGGAATCCCGGTAG 414989 28 100.0 32 ............................ AGAACGAAGCGATCGTGATAGGTGCGCCCTAG 414929 28 100.0 32 ............................ TGTTTGAAAAGTATTTTGGCAGGTTTACCCCT 414869 28 100.0 32 ............................ ATGACGGAAGACAATTCGCAGCCGGTGGCCGA 414809 28 100.0 32 ............................ TATGAGCAAACACGCCTCTTTGCCAGAGTCTT 414749 28 100.0 32 ............................ GCAAACACATCAAACCCAAGCTGGGCGAACTG 414689 28 100.0 32 ............................ GGTGAGTACGTTTGTGCCGATTGGTCGGAGAC 414629 28 100.0 32 ............................ AATACTGATGCCCCGATGCTGTATGTGTCTGA 414569 28 96.4 32 C........................... GAGTGTACTTACTTCAAGCTGACCGTTGACGG 414509 28 100.0 32 ............................ TTCGGCGGCCGGCCGCGAGCGTCTAGCCATCA 414449 27 82.1 0 .........T...C.A....T..-.... | ========== ====== ====== ====== ============================ ================================= ================== 28 28 97.1 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : ATCCTGCTTACTACGGCCGCTTCGGCTTTAAACCGGCCGCCGCCTATGGCCTGCACTGCCGCTGGCCGGACACGGAAAGCGCGTTCCAGGTCTACCCGTTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCTGCGCCGTTTAATCGCTTTTAACGATCGGCAATAGATACTCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGAGCTGGCAATTCAGGTCACCTGTGGGGTCTATGCGTCTGAGTGGGACGGATGGTGATACCAAACAGGGAACCTATAATTCCCCTCTAAAATGCAAAGATGTCACCTTACCCCGTTCTTGTTTGCCGAACCCTTTTTTGAGTGCCACTTTTAATTGATTGATTTAAAGTCATATTTTTAAACTCTTTAAAAAAGGCTTTTTGAACGGAGATTTCGATTTTCCTCCATCAATCAGCTGATTAGCGCTAATATGCAACG # Right flank : TAGAAGGGATAAAACTTTACCGACACCTGTTAACCAGGAAGCAAATATTCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCCAATGTCAATTCCCCTTTGCCGCGTAGCGCCTTGGCGCCTTTGCCGGCCTGATGCTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAGACGCAGCATGTAGAGGTGCCAGAGAGTGGGGGAAGTGTCGGTCATCGTACGCCGTTTCGGTGGCCAGGGTCGGCGTATGATGGCATGTTCGCCATCACAATCCCATCCCCGGCCGCCGGTGCCCTACCGCTTTACCCCTTTTTTCCCGCCAGCTCGAAGCGCGGCGAGACGATGCCGTACAGCGTCCAGCCGAGGAAGGTGGCGATGGCGCCCCACATCATC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //