Array 1 26011-28582 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNHF01000172.1 Bacteroides ovatus str. 3725 D1 iv gbf3725D1iv.contig.171, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 26011 47 89.4 29 A.........A....T.........A..............A...... AGAAATTAAAAAAAAAGTCAGCCAGCAGA 26087 47 100.0 29 ............................................... TAAATAAATGTTCCATGTCTGCCATACCT 26163 47 100.0 30 ............................................... TGTGGGAAGGAAACGAAGAGTTTCGAGAAT 26240 47 100.0 29 ............................................... CGGTTATAGCCCAATATAGAGCCTTTTCC 26316 47 100.0 30 ............................................... TAGGGGGTTAGAGCTATATTGTAAAAGATG 26393 47 100.0 30 ............................................... AGGAAGTCAAAATTGATGTGGCGACTGTTA 26470 47 100.0 30 ............................................... AACCCGCTTATTACTTCGAGGGCTACAAGC 26547 47 100.0 29 ............................................... AAAATGGGCGGAGGTTTTTGGTATTCCGT 26623 47 100.0 30 ............................................... ACATCTCAACTCGTCTGTAATGGGACACGC 26700 47 100.0 29 ............................................... TAGACGAGGTACTAAACGCCCGGAAGATC 26776 47 100.0 30 ............................................... TGTGGGAAGGAAACGAAGAGTTTCGAGAAT 26853 47 100.0 29 ............................................... TATGTGGTAAATACAAGCAGACGGCCAAT 26929 47 100.0 30 ............................................... CGCGCCGGAAAAAGAAGGACAAGCCGGATT 27006 47 100.0 29 ............................................... CGATAAATTCGTTATCCGGCTGGATTTTC 27082 47 100.0 29 ............................................... TATGATCCCCGATAGAGAACTGGCATTTC 27158 47 100.0 29 ............................................... TTTTATTTGGTAGTTTCTGTTTAATACCA 27234 47 100.0 29 ............................................... CATTATCTCAATGTTTAGAAAACCAATCC 27310 47 100.0 30 ............................................... TAGCCGGACGAGGAGTGACGACAGGGCGCC 27387 47 100.0 29 ............................................... TAAAACAAAATGAAGTACAAATCAAAGTA 27463 47 100.0 29 ............................................... CGATTCATTTAATAGTAATAGTAGACTTA 27539 47 100.0 30 ............................................... CAAAACGGCAAATTGAGTTCCTGTGCCAAC 27616 47 100.0 29 ............................................... ATGCAAATGCAAACAATTATTGACCTCAC 27692 47 100.0 30 ............................................... CAAAGATTCAGCATCAACAACAACATTATC 27769 47 100.0 30 ............................................... TCAGCATGCTAAATTCAACTTTGACCAGGC 27846 47 100.0 29 ............................................... ATCCTAAAATTTGTAAGTATCCTATAGGT 27922 47 100.0 29 ............................................... ACGTCAGTAACTTGTTTGGGGTCAATAAC 27998 47 100.0 30 ............................................... TTAATCATATCGGATTCCAACCGATTTTGT 28075 47 100.0 29 ............................................... ACCAACAATAACTGCACCAGTTCTTAATG 28151 47 100.0 30 ............................................... AAAATATTAGCCGAGGTTCCCGGGTCACCC 28228 47 100.0 30 ............................................... GGAAGATGTTTGTCATTGTAGGTCAATGTA 28305 47 100.0 30 ............................................... ACCGGGCAGACTTCCTTATACAAAATCGGT 28382 47 100.0 30 ............................................... AAAACTACTCACGGAAGGAGTACTTTAAAG 28459 47 100.0 30 ............................................... CCTATCTCGATATGTTTACAAATGACCATA 28536 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 34 47 99.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAAATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : TACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGAAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //