Array 1 86946-83197 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXIH01000007.1 Arcobacter defluvii strain CECT 7697 NODE_7_length_158968_cov_129.666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 86945 30 100.0 36 .............................. CCTGATATTAAGTACAAAGAAGTAATTAAATACAAG 86879 30 100.0 37 .............................. CTTACTAAACTTTAGTTTCATAAACATAGAAGAAAAT 86812 30 100.0 34 .............................. TAATGAAAACCTCCAATTAACCTATCAGCTGTAA 86748 30 100.0 38 .............................. TTTAATGATTTAAAAAAAAGAAGTATGAAACATAGAGA 86680 30 100.0 34 .............................. CTAAAATTTGTGATTGTATTGGTCATGGAAAATA 86616 30 100.0 37 .............................. AGAAATACAAAACCTAAAAAATCAACTTATCATAAAA 86549 30 100.0 36 .............................. CTAACTAAATAATCAATAGGCTTTAAATTTTCCATT 86483 30 100.0 37 .............................. GTTGTAATAGGACTTGATGAAAGTTCTTTTAGAACAA 86416 30 100.0 38 .............................. TCTAGTGTAACTGCTGTGATATAACTTACTATCATTAA 86348 30 100.0 35 .............................. TTGTTTTTTTTACCGTCTTGCATATCTAATTCAAC 86283 30 100.0 35 .............................. ACAATTTTATCAAAAAAATTTAATATATCACTATA 86218 30 100.0 34 .............................. GCTATTACAAGTCTTTTACTCATTAATGTTTTCA 86154 30 100.0 37 .............................. TTTAATATAAGTTTGACTATAAAAAGTAACCGCATTT 86087 30 100.0 34 .............................. TGACTAGAAACGATAGGCTCTACCTCTTCCATAG 86023 30 100.0 34 .............................. CAAATTCAGAATAAATGGTGTGATTTAGTATTGA 85959 30 100.0 36 .............................. AGTAACAATTAAAGATGATATGTTAGATGAATTGAG 85893 30 100.0 34 .............................. GAGAATTGATATAATGATAGAACCATTTGACATT 85829 30 100.0 34 .............................. TTATAATTATTTGCTTCAAAATCACCATAATGAG 85765 30 100.0 34 .............................. TAACGAGTCTTTATGTTTTTTAAAGTTGAAGTAT 85701 30 100.0 35 .............................. AGAAGTAAATCAAAGACTAGATGTGATTGAGCATA 85636 30 100.0 34 .............................. TCTTCAGATTCGATAACATTTATTGATTTAAATT 85572 30 100.0 35 .............................. ATCACAAGGAAAATTAAACGCTGAATTAAGAGCTG 85507 30 100.0 35 .............................. AGCGTATCTAATAACATAAAAGAAAATGAAAAATT 85442 30 100.0 35 .............................. TTAATAACTTCACTAAGTTCGCTTAACGGCAAGTC 85377 30 100.0 36 .............................. AAATCAACTTTAAATTTTGCGCTATTGTTTACGCTT 85311 30 100.0 34 .............................. ATATGAACAAATGTAAAACCAATAAGCATTTTTT 85247 30 100.0 36 .............................. TCATTAAAAATAAAAATTGATAGTTCGGACGCATTA 85181 30 100.0 36 .............................. ACTTATTTCAAATGGAAAAAAACAAAACCAGAGTTA 85115 30 100.0 35 .............................. GTTGTTAAATCAATACCATCTAGTAAATCTCTAAA 85050 30 100.0 35 .............................. GCAGAAATATTGAATTTAGAAGATTGATAAAAAAA 84985 30 100.0 34 .............................. AACTTTGGGATAATTACATAATTAGCTGGGTTTT 84921 30 100.0 35 .............................. ATTAATGAACAATTTAAACAATTAAATAAACAAAA 84856 30 100.0 35 .............................. CGCTATCTAATAATTTGCCTTATATTGTACCACTA 84791 30 100.0 36 .............................. AGGCGTAGAAAAAGCACTTTATCCAACTAGTAATAA 84725 30 100.0 35 .............................. GAAATAAATGACTTTTTAAAAGTTGAAGGAATTAA 84660 30 100.0 36 .............................. ATAAAAATAGGAGTTTTATTAAATTTTGGTAAATGT 84594 30 100.0 35 .............................. TCAGCCCACCAGTCATATCTTTCACCTTCATTTTC 84529 30 100.0 35 .............................. CGCTATAACACGGCTGAATTTGACGATATGAAATT 84464 30 100.0 35 .............................. AAGCTATTTATAAATGAAGTTGCAATATCTTTCAA 84399 30 100.0 34 .............................. TAAACTATTTCATTTACATAATCTAAAACTAAAG 84335 30 100.0 36 .............................. TTTCCCATTTTTGCAATAGCTATTCTTTCGTTTTGG 84269 30 100.0 35 .............................. ATCAATCTTGGTATGAGGATGTAAATAGATTAAGA 84204 30 100.0 35 .............................. TAAGGAATTTGTAGAGCTGCTCCAATTTGTCTTAA 84139 30 100.0 36 .............................. TATCAAACATATGCCCGATATATTCAAGGGGAGTTA 84073 30 96.7 35 T............................. GGATGTATTGATGATACTTTTGGAAATTGTTTAAA 84008 30 96.7 35 T............................. TTTTTTATAGTTACAGCAAATCCCTTTTGAGTTGT 83943 30 96.7 36 T............................. AAATAATACTCAGAAGAGATGTCGTTATGGAAAATT 83877 30 96.7 34 T............................. TTGACCATTATAATTTAGTTTGCCAGATGGATTA 83813 30 96.7 35 T............................. TAATCTGAAGCTTCTGGTTTAGGTGAATTAGTTGC 83748 30 96.7 35 T............................. TTTCTTAGTCCTTCTGCAAAAGTAGCAGGGATAAT 83683 30 100.0 36 .............................. AATGGTGAAACTTGTGTTCCTGACGCTCCTCCTAAT 83617 30 100.0 35 .............................. CATCTCAGGCTGTTCTCTTTCGGCTAAGAGCTCTC 83552 30 100.0 34 .............................. GTATCAGTTAAAGTTTTTAATTCATCCTCTAATT 83488 30 100.0 36 .............................. TAGTATCTTTTACAGTGGTAGTTGTTGCTGTATTTA 83422 30 100.0 35 .............................. ACAAATAATAAATATTATTGTTGATGCTAGAAATC 83357 30 100.0 35 .............................. GGAAGAAGAAAAAAAACGAAGAGATAAAGTAGATA 83292 30 100.0 36 .............................. AGGATTTACCTCTTAGTGATGCAGCTATTAATGCCT 83226 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 58 30 99.7 35 CTTGAACTTAAACATATAATGTATTGAAAC # Left flank : CCTTTTAGACTAAAGGATAAAATGTGAGTAAAGATAAGTTTAATTACAACTACGCTTTTTTATTTTATGATATTGCCGATGAATTTAGTGAAGCTGGAAAATATAGAGTTGCAAAAGTTTTTAAAATCTGTAAAAAATATCTAAAACATCATCAAAAATCTATTTTCAGAGGAAATATCACTCCTGCAAATCAGCTCAAACTAGAAACCGAACTAAAAAAAGTGATAGATAAAGATTTGGATTTTATTTCTATAATAAAAGTGCAAAATAGTGGGAGTTTTGTAGAAAAGACTTTGGGAAATGATAAAAAAGAAGTAGAATCAATCTTTATCTAATTTTTCCAACTATTTATAAATGAAATTAATAATCAAACTGCTATAATATCGACAATTTGAAGAGTTCTTTTACAACTTATTGTTAATTGAACTTTTGATTGGAAAAATTAGTTTTAAAACCGATTTTTAGGGATAATTGATGTGTAGTATGTCGATTTTTTCTTC # Right flank : CTCAAAATTTCATTAGGTTCAAAACCATTTCTTACTTGAACAATGTTTAATAAAATAAAAAGCTTTAAAACTTGAATGCAAACATACAATATTATATTCAAGTGTCAAAAAATTTAATAAAGATTGTAAAGTATCAATCTTTGAATCTTAAAGAATATAATAACTCTCTTCATAAGCTTTTTTTATATGATATGTTAGTTTTAGGAAAAGTTCTTCTTTTATAGCACTTGTAAACATAAAAATTTATTTCTTTATTTTACTTATAAAAAGTGGATTTTACACAGATTCATATAAAAACAAAATTATCACAATATGTTATAAAGCTATAATTTTTTATAATCAAAAATATTAAAAATTGAGGATTTAATGGTAACTTTTTTTATAAAAGTAAAAGGCATTGTTCAAGGAGTAGGGTTTCGTCCTTTTGTATATAATTTAGCAATTAAACATGATATAAAAGGTTGGGTTAATAATGATGAAAAAGGTGTAAATATTTTATT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACTTAAACATATAATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 6949-5198 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXIH01000024.1 Arcobacter defluvii strain CECT 7697 NODE_24_length_15134_cov_115.747, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6948 36 100.0 30 .................................... TCTGTTACTATATCAGTTACATCTGTATCT 6882 36 100.0 30 .................................... CTAAAAGTCTTTGTGCAACACTTGTCATTT 6816 36 100.0 30 .................................... GCTTTAATAGTTATGTCTCCAACTGCATCA 6750 36 100.0 30 .................................... ATATAACCAATAAGCACAATTCTCTTTTTT 6684 36 100.0 30 .................................... AAAACTGGTACAAGTTCAATTGAAGATACA 6618 36 100.0 30 .................................... CGAACAAAAGTAGTCGGGGTGAGTGTATTT 6552 36 100.0 30 .................................... CAAGCATTCTTTATTATTTCTAACGGTGAA 6486 36 100.0 30 .................................... TGTAAACAGGTGACAAATATCTATAAGCTC 6420 36 100.0 30 .................................... ATGAGTTCAATAGAAAAAGTTAAGTTTTCA 6354 36 100.0 30 .................................... TTAGATTTATTATCTTATCTTGGTGTTATT 6288 36 100.0 30 .................................... TAAGTTCGTATTGTCAAATGAGGGAAAATT 6222 36 100.0 30 .................................... AAGGAACTACTACAAGAGCAAAGAAAAGAG 6156 36 100.0 30 .................................... TAACAAAGCCCTGTAGTTCCTGCAACTAAC 6090 36 100.0 30 .................................... TAATATCTTGTTCTAGAGCTTTAACCTGTT 6024 36 100.0 30 .................................... CCACCTTTTGAAAGTGGAACTTTAGGATAT 5958 36 100.0 30 .................................... ACTAAGTTATCAGCATAAGAGTAGTAGTTA 5892 36 100.0 29 .................................... TGACTCTTGTAATGATTCTAATTTAACTT 5827 36 100.0 30 .................................... ACTTTTGATGGGAATGCGAGTACAGTTTCT 5761 36 100.0 30 .................................... TACTCATAAGTTCTTAAAATATTCCATTAC 5695 36 100.0 30 .................................... AAAGCCCAAGTTCTTTAAGTCCTTTTGAAT 5629 36 100.0 30 .................................... ACTGTTTTGATATTTGTTCCACTTACTAAT 5563 36 100.0 30 .................................... ACTGTTTTGATATTTGTTCCACTTACTAAT 5497 36 100.0 30 .................................... AAAGTCATTGGATTTGTATTCTTTTGCATT 5431 36 97.2 30 ........................A........... ACAAGTGCACTTGCACTCATCCACTCCGTT 5365 36 100.0 30 .................................... TACTCATAAGTTCTTAAAATATTCCATTAC 5299 36 100.0 30 .................................... GAGTTGGTGCGGGAGTATTTGATAGATTAG 5233 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.8 30 ATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAAC # Left flank : ATTTATGTGGTTGATGATAATGTTTGATATGCCTACAGATACTAAAAAGGCAAAGAAAAAATATAGATATCTTAGAACAAAACTTTTAAAAGAGGGATATATTATGATGCAGTTTTCTATTTATATTCGCTCATTTCACTCTTATGAATCAGCACTCAATGGGAAAAAGAAAATAAAAGATTTTATAGCATCTAATACTGTTAAAGGGAAGATAAGAATTATAGTATTTACTGATAAACAGTTTGCAAATATGGATATAATAGTTGGTACAAAAAGTGAAGAAGAAAAAAATGCGCCAAAACAGCTATTGCTGTTTTGACCATTCAAAATCTCCTTTGAAAAATCAAAGGATTATTTTAAGTCCCCATAAGAAACTTTTAGTTTCACAAACCCCTTTGTGATAAAACTTCTAAATATTAGCTAAAAAAAGCTCAAATTGTCAATATTTTTTTAACTAAAACTAGGTAAAAGCCTATGAATAAGGCTATCTCAAGACACCC # Right flank : AAAGAGGTTCAAGATGTTACAGGTTCTTGAACTTTTCGTATATTCAAGTCATCATTTCATGTCTTATTTTCTGTTGACAGATCAATTTTAACTTGACGTTTTTTCAAGTGATTTAGCTTTTTTTAATTATTCGTTTTAATTTTCACTACTATTTGCAATTCTTTTTCTTTCTGTCATAATCTTTAAAGCTAAAGTTTTATCAATTTTTATTCTAAAAGTATCGTGAATAGTACTAATAACTTTTGAGGCTAAATACAAAGATGTAATAACGGCTCCAACTGTTCCAATACCAGCTACCCAAGTTCCAATCATAATCCAAAATGTTGATGTTTCTATACTCATTTAAAACCTCTTATTATTTAATTTTCGCAAAAGGATTAATAAACTCTAACTTATCTAACTCACTATTGTATGAAAGCAATATGGTCTTACTAAAAATAAATTCATTTGGTATTTCCTTTACTTCATTATTATTGTACTTCTCTAAAAACATTAAAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //