Array 1 9653-6082 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKL01000024.1 Vibrio navarrensis strain VN-0516 NODE_24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9652 28 100.0 32 ............................ ATCGAGCGATGAACGGTGCCGTTGCTGGTACA 9592 28 100.0 32 ............................ CTCAGGCGTGACTTCAAGCTCGATGAGTGGCG 9532 28 100.0 32 ............................ ACCCCACGGACCAATCGGCGATGCGGTCTAGC 9472 28 100.0 32 ............................ ACGCACCACACTTGACCGCAATACCGTCAGGC 9412 28 100.0 32 ............................ AACGCGTCACGTTTCGCAATCAGTGTGTCAAT 9352 28 100.0 32 ............................ ATTGACGTTGTTACATTTCAACTTGGTATAAA 9292 28 100.0 32 ............................ AGAAATCGACACGGACGTCGTGGTCGGCGGTC 9232 28 100.0 32 ............................ GTCGTGCGCTCCACGTCTGACGGGGTGTAAAA 9172 28 100.0 32 ............................ GCTGAACAAGCAAAAGCTGGCAATATAAGCCA 9112 28 100.0 32 ............................ TACATCCTTTGTATTTACTGTCTTCTCCTGCT 9052 28 100.0 32 ............................ TTGGCCAGCATCCGGCCCAAGCAATGACTCTT 8992 28 100.0 32 ............................ TCGATGCTACTTACTCGATTCAGTTTCCTGAC 8932 28 100.0 32 ............................ GAATGCGTAGTGCTGCGATTATCGCGTGTTGT 8872 28 100.0 32 ............................ GCAATCCATATGTATTGGAAAGACGTGTTAGT 8812 28 100.0 32 ............................ ACGCACCACACTTGACCGCAATACCGTCAGGC 8752 28 100.0 32 ............................ AACGCGTCACGTTTCGCAATCAGTGTGTCAAT 8692 28 100.0 32 ............................ ATTGACGTTGTTACATTTCAACTTGGTATAAA 8632 28 100.0 32 ............................ GTTTCCCTGTCGAATTCACTCTTTCACTTGAA 8572 28 100.0 32 ............................ AAGTACGCAGAAATGCAAGGTCTGTTGAAAAT 8512 28 100.0 32 ............................ GATTGGCAGCTTTAGAATAACGTTTAACACTA 8452 28 100.0 32 ............................ AAATGAATCAAACTCCTGAGTTGATAGGTCGA 8392 28 100.0 32 ............................ AAGATTTTGCAAGGCCTCCAGCATGTCCGTGT 8332 28 100.0 32 ............................ TCCATCATCTCCGCCACCTCCTCAAAGTGGCA 8272 28 96.4 32 ...T........................ TGACAGCCCTGCTATTGACATAGAAAGTCCAG 8212 28 100.0 32 ............................ GATTTCAACGGCAAGATACATATAGCCCAGAC 8152 28 100.0 32 ............................ GAACAATCAAGAAATGCGCTGAGTGGGGAAAC 8092 28 100.0 32 ............................ ACCTGCGTCACTTGCTAAGGCGTTGAATAGTT 8032 28 100.0 32 ............................ GTAGAAATCGCCACGGTATGCCGTCGGCAGCT 7972 28 100.0 32 ............................ GTGGGCACTACATACTTTCAAGTCCCAGGCTA 7912 28 100.0 32 ............................ ACTTATCGGAAGTGATAGGGTCGGAACGATCA 7852 28 100.0 32 ............................ TTGTAACAGACCTTGGCCGTGTTGAGCTTTCA 7792 28 100.0 32 ............................ TCCTTGCACCGGAAACGGCGTCACGTTCTCTG 7732 28 100.0 32 ............................ TTTACGTGGGTTCTGTGTACGTGAGTGCTGGA 7672 28 100.0 33 ............................ AGTTATGGAGCGGCTGCGCATATACGAATTGAT 7611 28 100.0 32 ............................ TATGTGCCCGACGAAGCCGACCCGACCCGACG 7551 28 100.0 32 ............................ TTCATCAGCATGGTTTTCTGTTGAGGGGGTTA 7491 28 100.0 33 ............................ GTTGAGACCAACCAGATCACGATTTGCTCGTTT 7430 28 100.0 32 ............................ TGAAAACCATCAAACTTATTGAGGTATAACCA 7370 28 100.0 32 ............................ CAGGTTGCCGCTCATGCCCGCCAGCTCTTGCT 7310 28 100.0 32 ............................ GGAAAGTTCACGCAAAGAAAATGCATGAGCTG 7250 28 100.0 32 ............................ TGAATGAGCGCATAAAAGGCGCTGCGCACTTC 7190 28 100.0 32 ............................ GCTCAGGTTCAATTTATGCGGCTCCATTGGTC 7130 28 100.0 32 ............................ TTTATAATTACCCCATCACTGAAGTTGAAATA 7070 28 100.0 32 ............................ ATGAACGACTATTAAGAAAAATAGAGGTTTCA 7010 28 100.0 32 ............................ TTATCCAAACTTCGACCTCTATTGATCTTTTT 6950 28 100.0 32 ............................ TTGATGATCTTGATTGTGGGCATGAACAAGCC 6890 28 100.0 32 ............................ ACATCCCCGCCGACCTGTACGACAAAAAGAAC 6830 28 100.0 32 ............................ ATACTCACTTCGCTCCTTTACGACACTCAACG 6770 28 100.0 32 ............................ AACACGGGCGAGCAGTCGTCGCTTGATTTTCT 6710 28 100.0 33 ............................ AGTCGCCGTCTATAACTGTTGCTTTTGTCCATT 6649 28 100.0 32 ............................ TACAGACCCATACGTTGATGACCTTGGCTCAA 6589 28 100.0 32 ............................ CTGGTTAGGCGATGTTCAACATGAAGAAGAAC 6529 28 100.0 32 ............................ CTTGAGTCGCGTAATGTACTGCGACTTCGCTT 6469 28 100.0 32 ............................ TTACGGACCTACGGGCGCTACGCCGGATTTAG 6409 28 100.0 32 ............................ TGAATGCGCATTAAACGGCATTATATTAAATG 6349 28 100.0 32 ............................ GTTTAAGCGTGAATTTCTCTTAGAGTCTCAGC 6289 28 100.0 32 ............................ TATCAACGGCATTGCTAATTAAAGAATCCAAG 6229 28 100.0 32 ............................ ATGAACTGGTTGTACGCAGTGAACGTCTGTCC 6169 28 100.0 32 ............................ GACAAATGAGTGTCAAGGGGTCGTTTTTCTAG 6109 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 60 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGTCTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGAGAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCCGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGCAGCAAAGTGCATGGGCAGTCAATATTGGCGACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : ACAAAAACGCCACGAGCAAAGCTGGTGGCGTTAACATCAAATCCAATCATAGTAATCGAGCATTTTCGATGCGCCTGTACCCCAAGCCGTACCCAGGGTGACTTTTTCTACAATTAAAAACCTTTGAATCCCTTATTTAATGCGCTCCAGCAGTACACCTGCTTCCATGTGGTGGGTGTAAGGGAACTGGTCAAACAGGGCGAAACGAGTAATGGTGTGGGTTTCGCTCAGGATTTCGAGGTTCTCAAGCAGGGTCTCTGGGTTGCACGATATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCCACATCCATACCTGCGCGCGGTGGATCGACAAAAATGGTGTTGCAGTTATAGCTCTTAAGATCGATGCCATGGTCTTTCAGGCGGCGAAACTCGCGTTTGCCTTCCATCGCTTCGGTAAACTCTTCCGCTGACATACGGATGATCTGCACGTTCTCAATTTTGTTGGCGGCAATGTTGTATTGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //