Array 1 3730-1196 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENRX010000112.1 Streptomyces sp. MBT67 scaffold112_size20482_cov50.4824, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 3729 29 100.0 32 ............................. TCGGCCCGTGACTTCGCGACGTCCTCGTTGTG 3668 29 100.0 32 ............................. TAGTTGATCACCAGTGCGCCGGCCGCCGTGGT 3607 29 100.0 32 ............................. TGCCGGTTCATTGCCCCCGGTCCCTACGGCGC 3546 29 100.0 32 ............................. TCCCTCGCGGACCGGGCGGGCGGGACCCGGAC 3485 29 100.0 32 ............................. CTCATCGGGCCCGCCTCCAGTCAGCCGCCAGG 3424 29 100.0 34 ............................. ATGCCGCCCTCGGCAAAGCCGCGGAACTGGCGCT 3361 29 100.0 33 ............................. AGGCCCATGCCGCCCACGAAGCGGGTCACGAGC 3299 29 100.0 32 ............................. GCTTGGACTTCGGCGAGGTCGACGTGGTCGTC 3238 29 96.6 32 ............................A CCAGCCCGTCCGCGACCAGGGCCTTGACCGCC 3177 29 100.0 32 ............................. GATCAGCACAGGCCCACGCAGGGGCCTCCAGA 3116 29 100.0 32 ............................. TAGGACCGGCCAGCCGACGACGAGCACCAGGA 3055 29 100.0 32 ............................. TCGCGGCCCTCGTCCTCGCACTTCTTCGCGAT 2994 29 100.0 32 ............................. GAGCAGCGACTCGCAGCCGTTCCCGTCGAGAG 2933 29 100.0 32 ............................. ACCGGGATCGATCTCAGCACGTTCACGGTGCT 2872 29 100.0 32 ............................. TGGCCTCGGTGACCCGGAAGTTCCGGCGCCGC 2811 29 100.0 32 ............................. AGGTTCAGAGAGAATGGGCCCGTGCCCGAAGA 2750 29 100.0 32 ............................. CGGGTCGTCGACCTCCTGGCCGCGTACATCGA 2689 29 100.0 32 ............................. TTGGCGACCAGCGTCCCATTGATGCCGTTGCG 2628 29 100.0 32 ............................. GACACCAAGCGCCTTTACCAGTACCAGGGTTC 2567 29 100.0 32 ............................. ACGAGCTCGTCGGGCCGGAGGCCGTCGCTGAC 2506 29 100.0 32 ............................. TCGCCCAGCCGCGTCATGGCGCTGATCGGGCG 2445 29 100.0 32 ............................. TAGACGAACTCCAGCTGCCAGTTGGTCGATGC 2384 29 100.0 32 ............................. AACCTGTTCCGCGGCTGAGGGCCGATCAGCCG 2323 29 100.0 32 ............................. GTGATGAGGTTCTCCCCGGGCTCCAGGCCCCA 2262 29 100.0 32 ............................. GAACTGGCCCAGTCGGAGCGCATCCGGGAGAA 2201 29 96.6 32 ..T.......................... GCGCGGCGGCCCGGGTCGGTGTCGTCGCAGAT 2140 29 100.0 32 ............................. GTGCTCATGCGCGCGTCCCCGATCCGGCCTGC 2079 29 100.0 32 ............................. AGGGTGGCCTCGAAGGCGAGGAGGGCCAGGGC 2018 29 100.0 32 ............................. CACGTCGCGATCACCACCATGATGTGGATCAC 1957 29 100.0 32 ............................. TCGCCGCCGCGCGGGACGACCGGCCCGGCCGG 1896 29 100.0 32 ............................. CGTTCCTGGTTGAGCTCGGAGTCCATCAGGTT 1835 29 100.0 33 ............................. ATGCCCATGGTGAACCTCCACTATCCGGGGGGG 1773 29 100.0 32 ............................. TCGAGCCGTACGGGCGGGAAGTGGCCCGCTTC 1712 29 100.0 32 ............................. CGGCCCATGGTGAACCTCCACTATCCGGGGGG 1651 29 100.0 32 ............................. TCGAGCCGTACGGGCGGGAAGTGGCCCGCTTC 1590 29 100.0 32 ............................. CGGCCCATCAGGGCGACGGCACCGCACGTGCT 1529 29 100.0 32 ............................. ATGCCCATGCCGCCCACGAAGCGGGTCACGCG 1468 29 100.0 32 ............................. CCTTCACGGCTGTCCATGCGCTTGACCATCGC 1407 29 100.0 32 ............................. CCCCATACGAGACCGGATGTGACGCCGAGGCC 1346 29 96.6 32 ................T............ GTGCTGTCCCGGCTCCAGGAGCGGGACGTGCT 1285 29 100.0 32 ............................. CAGCTCCGCGAGTGCCGCGTCACCGGCTGGTC 1224 29 96.6 0 .......................A..... | ========== ====== ====== ====== ============================= ================================== ================== 42 29 99.7 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GGCACTGACGTACGTCGGATCATCACGAACCGGCCCGTAGAGCAAGGGAACCTGCGCCTGAAAAGGGGGAGAAATCTTGCCGATGTCATGCAAACCCGCCCAGAACGAAACCACAGAGCGGGTCTCAGACAGGCCCAAACCAAGCGCACCAGCAACAGCCAACTTCGTACCGTCGCCCACTACCTCATCCCACAACTCCTGGAACGCAGCACTGGTATCCAGTAGATGGCACACCACCGGATACGGACGCGACAGCCCGTTCTCCTTTCCCCATAACCGCACATCCAAGAAACAGCGTCCCGACACCCCAGCCTCGCCACCCTTCAGCATGCCCACAGAGGTAGCACCCCCCACTGACAACGACCCCGAATCGCCGAAGATGGCACCGAAAGGCGAGCGCGCATTTACACTCGCTGCGCGACGGCGACGAAACGGGAACCATGATCGACAACGGTCAGCAAGAGATGGCAAAGCCACTCAGTAAGCGCAGGTCGCGAAGG # Right flank : GAGAAGCTGGTCGCCGGGGCTCCCCACGGGTTGTGGGCCGCCGTGCCGTACACAGCAGCCCAGGGCGTTGGTTCGGCAGATAGCACACGCCGTCGACCGCGGGGCGTCACTGCCTGGGTGAACAGGGGGACGTGAAATTGAGACCATCATCCAGATCGTCAATCCGTCGCTGCTCGACGACCTCCGCAAGCAGCGCAAAACCGGGAGCCCTTCATGACCGACGCCTTGGTGGCCTTCCTCCGGGAGCGGCTCGACGAGCAGCTGGAGAAGGCACGCTTCGCCAGCAGCACGGTGGCTAAGGCCCCCGAGCGGTTCGGTGTAGATCCCGAGCAGGCCACGGCGCATGCCCGGTTCTCCGTCGCCACCGCCGAGGTACACCTCGCACTCCTGGAGGACACCGTCATCCCGCACCTGGGAGCAGGTGGGGCAGCCGACCGGACTGCTGAGTACCAGCTGCGGCTCCTGGCCGCTCCCTACGTCGAGCACAAGGACTACCCGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13390-17928 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENRX010000112.1 Streptomyces sp. MBT67 scaffold112_size20482_cov50.4824, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13390 29 100.0 32 ............................. CCTGATGGACATCTAGGCACCCATAGGCAATG 13451 29 100.0 32 ............................. GGGTCACGTCAAGGCATTCGCGCAGGTCACAT 13512 29 100.0 32 ............................. CTCGCCGAGAACGCCCGCGGGGCACCCCCGGA 13573 29 100.0 32 ............................. TCTCACCAGGGCGTCCTGCGGGCCCTTCCGCG 13634 29 100.0 32 ............................. CCCGCGTCCCTTTTACTGTCTGTAGTCGTGCC 13695 29 100.0 32 ............................. CTCTTCGGGTCGGACAGCCACATGATCACGTC 13756 29 100.0 32 ............................. GCCTTGAGTGACGGGTTCCAGTCCGGGGTCGG 13817 29 100.0 32 ............................. TCCAACGGCGGCGGTGACGTCCTGACCGTCGA 13878 29 100.0 32 ............................. GTCAACGACCAGGTGAAGGTCTACCACCCGAC 13939 29 100.0 32 ............................. GTCCCGTGCTTAGTACGTGACGACACGTCTGA 14000 29 100.0 32 ............................. CTGGCCGCGAAGATGAAGACGGCGACGAAGGC 14061 29 96.6 32 A............................ CAGCGCCTTCTGGATCTGCTCGGGCGTGGCGT 14122 29 100.0 32 ............................. ATCGTGGTGCTCACGACGCGCTCACCTCCGTG 14183 29 100.0 32 ............................. TACCTGTCGGTCTCGGCCGCGGACACCCTCGG 14244 29 100.0 32 ............................. CCCACGGTGCCCGCGCCGACCGAGTCATTTCT 14305 29 100.0 32 ............................. GCGTCGTCGTCGCCGTCGTTGTCGACGGTCAC 14366 29 100.0 32 ............................. TCCGTCCAGGGCTACAACCTTGAACACCGCGT 14427 29 100.0 32 ............................. TCGTCGAGGTGGATCGCGCGCAGGGGCCGGTG 14488 29 100.0 32 ............................. TCTGCCGCCCAACGAGGGAACCACCCCGCTCA 14549 29 100.0 32 ............................. GCGAACCCGGCGTTGGGGTACCGGCTGACGCT 14610 29 100.0 32 ............................. TGCATGAGGGCTCGGGCGTTCGTAGTGGCGTA 14671 29 100.0 32 ............................. TACGAGCAGCTGCTCGCCGACTACGAGCGGAT 14732 29 100.0 32 ............................. ACCACCGAGTACCTCGAAGACATGGCGGCCAT 14793 29 100.0 32 ............................. AGGCACCGCACCACCTGCTCGCCCGGCAGGAG 14854 29 100.0 32 ............................. CCTGCCCCGGCCCCGGATCTCCGCTGCATCGC 14915 29 100.0 32 ............................. CGGCCGGGCACACCGTGGTCCGCTGCGACGTC 14976 29 100.0 32 ............................. TGAAACGGCGACATCGCCGGGTACGTGGCGAC 15037 29 100.0 32 ............................. CCGCGCGGCTCCGGACCCTCGTCGGGCACCTC 15098 29 100.0 32 ............................. AAGCAGACCGACGTACGGGGCGAGAGCCAGGA 15159 29 100.0 32 ............................. TCGACGACCGGCTTCGCCTGACCGCCCCCGGC 15220 29 100.0 32 ............................. CAGCCCAGCATGCGGTCGATGCTGGCGGAGGA 15281 29 100.0 32 ............................. GGGCAAGTGCCGCCGCCGCTGGAACCGGTGGA 15342 29 100.0 32 ............................. CGGGTCAACACCGTCCTGGACAACACCCTCAT 15403 29 100.0 32 ............................. AGATGTGGACGGCCCAGCCCGGCGCCCCCGTC 15464 29 100.0 32 ............................. TGCAGGCGCAGGTCGCCGCCGGAGACCGGGCC 15525 29 100.0 32 ............................. GGCCACCCATCAGGGCGCGGTCATGACCGGGT 15586 29 100.0 32 ............................. CTTGTGCAGCAGCTCACCGAGGAGGACGTGAT 15647 29 100.0 32 ............................. AGGGTGAACCCTGTTGCGCTGACGTTGATGGG 15708 29 100.0 32 ............................. AAGCTGATGTCCGTAGAGCGGGAGGACCTGGA 15769 29 100.0 32 ............................. CGGCAGCACACGGTCTCGGTGCGGCTGTCCGA 15830 29 100.0 32 ............................. CTGTGGAGGACCGAGGCGTGTTCTTCTACCCG 15891 29 100.0 32 ............................. ATCCCGCCCGTGCCGTTCCACCCCGAGGCGAA 15952 29 100.0 32 ............................. CTGCCGGAGACGGCCATCAGACCCCGCCGATC 16013 29 100.0 32 ............................. GCGGCCTGCCGCAAGCGATGGCCCAAGCCGCC 16074 29 100.0 32 ............................. TCGATGTCATCCCGAACACCCAGGGCATCTAC 16135 29 100.0 32 ............................. CCGGACGCGCCGCCGATCAGCTCGACCCTCCT 16196 29 100.0 32 ............................. GCCGCCGCGATGACCCCGAGATCCGGGGCGTG 16257 29 100.0 32 ............................. CCGGAGGGGATGCCGGTCTGCTTGCCGTCGCG 16318 29 100.0 32 ............................. TGGCGGACGGTCCCCCCGACGCGCAACACGGG 16379 29 100.0 32 ............................. GTGTCGTTGGCCCGGACCGATTCGACGATCAC 16440 29 100.0 32 ............................. CTGTGCGCGTTCTGCGGCGGGCCCATCCAGCA 16501 29 100.0 32 ............................. CCGCGGTGCCCACTCCGCCGGCCACGGTGTCG 16562 29 100.0 32 ............................. GACAACCGGTGGGCGGACGTTCTCGACCTGAT 16623 29 100.0 32 ............................. CGAACGCGGGCTTTAGTAGTAAGGGAAAATCT 16684 29 96.6 32 ............................C TGCCTCCCCCGCCGGGCGTCCGGCGCCCGACC 16745 29 100.0 32 ............................. CTTCATCGACATGCTCCAGCCCATCGTCGACA 16806 29 100.0 32 ............................. AACCTTTAAAACCCCAGGTCAGAGCCGGTTTC 16867 29 100.0 32 ............................. CCGGACGTCGAGCTCACCGTCGCTGGGTGGGG 16928 29 100.0 32 ............................. CTGACGTGCACCGGGTACGTGCCCGACGCGGT 16989 29 96.6 32 ............................A AGCCCCCGGGGCCGTGGGGCCGCTGCGGGGGC 17050 29 100.0 32 ............................. ACGCCGACGGCGACCAGTCCGGCGCGGCCGAC 17111 29 100.0 32 ............................. TTCCCGGACGCGCAGGGACTGGCCGTCCAGAA 17172 29 100.0 32 ............................. CACCGAACGCAACCGGGGACTTCAGTTCGATG 17233 29 100.0 32 ............................. CCACGGCCAACGCCTTGCCCCTGATCCACTTC 17294 29 100.0 32 ............................. GACGATTCGAGATCAGCCGTATCAACGCAACC 17355 29 100.0 32 ............................. ACGGTGGACGCGCTCGCGGCCGCCCAGAAGAA 17416 29 100.0 32 ............................. GAGGGCAGCGATGCCGAAGACGACTGAGCGCC 17477 29 100.0 32 ............................. TCGGGCGCATCACCATCCCGTCCCGGAACGAC 17538 29 100.0 30 ............................. AAGCTCGGGACCCGCGTTCGGGCGGGCCGT 17597 29 100.0 32 ............................. GCGGACGTCCGGATCACCAACGCGGAGCAGGC 17658 29 100.0 32 ............................. CAAACGGAAGATCGACCTTGCTGTGTGCGCAA 17719 29 96.6 32 ...............C............. GGTGCGGCGACTACGACCCGGAAACCGGCCTC 17780 29 100.0 32 ............................. ATGCCGTCAAGGATGAGGTGGCCAACGCGGCG 17841 29 96.6 31 ...........................T. ATCTGCGGGCAGAGGGTCACGTCGTGACGTA 17901 28 75.9 0 .........A...CT....G.A..-...C | ========== ====== ====== ====== ============================= ================================ ================== 75 29 99.5 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCCACGCATCGTCACCGACATTCAGCAACTCCTCGATCCCGACCACACCTACGAAGCCCCCGACTCGGCGGAGCAGATGGTCGACCTCTGGGACCCCGTGGTCGGCTCCGTACCCGCCGGCGTCAATCACGGACTCCAGCCGTGACCCGCCCCACGGAAGAACATCGGCCATGTCCTCGATGATCGTCATTTCAGCCACTGCCGTACCCGACCACCTCCGAGGAGCCCTCACCAGGTGGCTTCTCGAAGTCACACCCGAGCTCTACGTCGGCACCGTCTCCGCCAAAGTCCGCGACGAACTCTGGACAGCCGTCACCGCCTGCACCGACGACGGCCTCGCAGTCCTCGCACACCCCGCCGACAACGAACAAGGCTTCCAACTTCATACAGCAGGAAAGCGCCGCCGTGAGCCCATCGACTTCGACGGGCTCACCCTGATCGCCTTTCAACGAGAAGGTCAAGAAACGGCAAAGCCACTCTAACGGCCCAGGTCGCGAAGG # Right flank : CCGCCCGAGATCACGCCTGAGGGCTGTTCTGTAGTCCTGGTGGATCAGCGTGCGCGTCAGATGCGGTGCATCGTAAGGCCGTAGGGGCGTTCGCGTACTGGATGATCCCGGGCGCGGAGAACGCGGTGAGGTGCCTGAGCTGTCGTGGTGCGCCCGCCAGGGGTTACGGGGCAGTCCGAAGGGCTTCGAGCAGGCGCTCGTACGCCCGCTTCGGCCGCAGGTCCGTGTCCCATGGCAGGGAATCGGCGGGGCGTGGGGGGTAGATCTTGGTGTCGGCGGTGGAGCCGTACCGGTCGGTGAATCCCCAGGTGGAGAATGATGTGCAGTTCGGCTCCTCCAGACAGACTTGCAGCTTGCCTGCCATCTCGTCAGCCTGGGCCTCTCGGCCGCCCTTCTCGTCCTCAGCTATGGGGACGTCCATCTCCGATACCCGCGCCTGGATCCCGAGTTCCGCCAGATCCTGGACATGGCTGCGGAAGGTCTCCGGGGCGGTGCGGTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1856-2782 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENRX010000058.1 Streptomyces sp. MBT67 scaffold58_size47256_cov43.8289, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================================== ================== 1856 29 100.0 32 ............................. ATGGGCTTTCGCGTGGCCACCCGCCCGGACGG 1917 29 100.0 32 ............................. TATTGCCGCATGGCCGCCAGGCACGGATCCCC 1978 29 93.1 84 ..........T.................T TAAGGCGGCTGGTGCGCGGCTGCGCGTGCCGGGGTGCTCTGGAGGTGAGCCCGTACCGTTCGGCCTCCAGGCGGGCCCCTGGGA 2091 29 89.7 32 ...T....T.T.................. GGCCTCGACGTGTACCCGGTCTGTGTCGCGTC 2152 28 96.6 32 ...............-............. GCGTCGACCGCGCGCATGCCGAAGGCGAAGGC 2212 29 96.6 32 .............A............... TCGACGACCAGGTGGGCCAGGAGGTCGACGAC 2273 27 93.1 32 ........--................... GAGGTCAAGGGCGCGGGCGGCCACGGGGCCGT 2332 29 100.0 32 ............................. CTCACATGCGATTCGGCAGGGGCCGAGGTGTG 2393 29 100.0 32 ............................. ATCCTCATGGTCCTGGCCGTGGGAAGCGTGCT 2454 29 100.0 32 ............................. GTGTCCTGGTCCGCGGCGTCGTCCTTGCAGAC 2515 29 86.2 32 ...T.T........C..T........... GCCGAGTACGAGATCCGCGGCTTCGTCCGGGC 2576 29 100.0 31 ............................. CAGGTCGTTCGGCGGCCGACAAGGTCGCTGG 2636 27 86.2 32 A.......--.............A..... CCGGTGCGGGCGTAGACCAGCGCGTTGCGCAG 2695 29 96.6 31 .....................A....... ACCCGCAAGGGCGAGACGATCAAAGCCAAGC 2755 28 86.2 0 C......G...............-.A... | ========== ====== ====== ====== ============================= ==================================================================================== ================== 15 29 95.0 36 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGAGGAACTCGAGGACGCAGCCGTCGGCCTCGCGCCCCCACCGCCGCCTCCGCTGGAGCACCCCGACACCAACACCACCGGGGCCAGCCCCGCTGTCACGGCTCCATCGTCCTCATGCGCCGCAGGATCCCAGCCCCACCGGGCAGGGGAAGGAATACCCCCGCATCGGGGATCCTCAGTAACAGGTGCGGGGCCTAACGATGACCAACCACACAGCGGGAGCGCCACCGCCATGGCCCAAGACCACCTCGTCGAAGCCGGAACCGCCGCCCGCCGCGCCGAACCCCTTGCACTCCGTCGGCAAGACGTCCGGTACGACGACCCCCGCATCATGCGCCTCGGCTACGCCACCGCCGGTGCCGCCTGCAAGGACCTGACCGCGCCCTCCAGCATCACCACGACGAAGAAGCCGCCGAGACTAAGGTCTACCGGCAGCAAAAGAACGAGCGCCTCGACGCTCTCCTCGAAGCCATCTGGGACAAAGCCACCGCCCCAGCCCC # Right flank : GCCTACTGGTTTGTGAATCAGGCGCCTGGCGGGCTGTCGGCTCGTCGCGGTATCCGGCTTCGCGAGCGTGGTGCCGGGCGATGTGTGCGAGGTCTACGCGGGACAGCTTCGGGGCCATGCCTTGCTGGCGGGGGTGTTTGTCTCGGTCATGTCCCGCCTCCTACCTGCTTCCGTAGGTCATCAGCGAGCTGCGGGCCCCGTGGGCGAGCTGGAGGCCGCGGCGGACGAGGGCCGGGCCGTAGAGCTGTTCGGCTGTCTCGCGGCCCAGGGTGTCGACGGCGACGGTGATCGGTGAGGTGTCGGCCATCATCAGCCGCTGGCGGGCGTCGTTGCGGGTCTCCGCGATCTCGGAGTCGCTCAGGCTTTCGTCGACGGTGGAGTGGACTAGGAGTAGCCGATCACCGGCGAGGCGGGCAGGCCCATGACCGGACCGATGCGGGCCGGTCCGAGCTTGCGGTCCCGACTCAGCGCCAGACCTGCGCCTCGACTTCGGCGGATGT # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.27, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //