Array 1 64184-63546 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MPAA01000023.1 Escherichia coli strain 3-R1 NODE_23_length_80907_cov_16.4534, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     64183	    29	 100.0	    32	.............................	CCGAATAGACAATGACCGCAAAGTGTCTATCG	
     64122	    29	 100.0	    32	.............................	CTTTCCTACTGAATCCGCGTCGGTTGCCTCTG	
     64061	    29	 100.0	    32	.............................	AGCCAGACACATTGCTTTATCGCGCCACGCTG	
     64000	    29	 100.0	    32	.............................	GCGAGTAAGAGTACTGAGTATTTTAATCTCAT	
     63939	    29	 100.0	    32	.............................	GCCATAGACTTTATTAACTTCATTGGGGGTTA	
     63878	    29	 100.0	    32	.............................	CGTATCACAACCGGCCTCAGTACGTATCAGAA	
     63817	    29	 100.0	    32	.............................	AGGGGCAGGGAGTGACGCTGGAGCAGGCGATC	
     63756	    29	  96.6	    32	..........................C..	CAGGGAAACCGTTCGTACTTATCGACCTCAAC	
     63695	    29	  96.6	    32	..........................C..	AAGGGGACGGCTACGGGACGCCGCCTATTGAC	
     63634	    29	  93.1	    32	............T.............C..	GACGCACTGGATGCGATGATGGACATCACTTG	
     63573	    28	  72.4	     0	.A.........C..T....T-.G..C..C	|                               	
==========	======	======	======	=============================	================================	==================
        11	    29	  96.2	    32	GTGTTCCCCGCGCCAGCGGGGATAAATCG	                                	       

# Left flank :   GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGCGATAGCGGTCACCGGGGACGCGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGATCGCGATCTGGCTCCTGGAAGTGCGTGCCGGTGTTTATGTCGGAGATACGTCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGGTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCTGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  CAGCTCTCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACTGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCATCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTTTCGGTGTCACTCATCCGCT

# Questionable array : NO	 Score: 6.07
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAATCG
# Alternate repeat :   GTGTTCCCCGCGCCAGCGGGGATAAACCG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [46.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//