Array 1 290866-288673 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDC010000002.1 Clostridioides sp. ZZV14-6104 ZZV14-6104_263, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 290865 29 100.0 38 ............................. TTAATGTTTGGAAGACATTACTCGGGATTAATACCAAC 290798 29 100.0 37 ............................. TAATAAGGTTGATGGAAAACATTGGAGTGACAGACTT 290732 29 100.0 36 ............................. ACTTTTTTATTATTATTTATAACTTATATGAGCTTC 290667 29 100.0 35 ............................. AAAGAAGTACAAAAGAAGCTTGAAACAATGTACAA 290603 29 100.0 37 ............................. TTTCAAAAGAGAATAAAAAAAGCTCATGAGTTCTTTC 290537 29 100.0 37 ............................. AAAACTTCTAATCTGAACTAAAATGCGAGGAGTATTA 290471 29 100.0 36 ............................. ATATTCTCTTGATGATATAATGACATCAAGTGTAGA 290406 29 100.0 36 ............................. CGCAAAAATATCTACTAAAACAAATGTGAATATACC 290341 29 100.0 37 ............................. TAGGTTAATTAAGCGATGTGTAGTTCACCAGAAGAAG 290275 29 100.0 36 ............................. AAAGTTGAGAAATGGGAAAGATTTTTAAATAATGAA 290210 29 100.0 36 ............................. TTCTAAAAGTAATTCATGAGAACCTAATTCTATATC 290145 29 100.0 37 ............................. TTTATTTCAAAAGTCAAGAACAAATACAACTTTTTAG 290079 29 100.0 37 ............................. TTTTATAATCATTCATTTTTTTCCCATCTAGTAATAG 290013 29 100.0 37 ............................. TCTAGGTAAAAATCATAAGCCATTTATATCCCTCCTC 289947 29 100.0 36 ............................. GATACGGAAGAATGTTTATATGTTGGGAAAACAGAA 289882 29 100.0 38 ............................. CAATTATTGGGGGCATGATTTTGCTACTGAGATAACTA 289815 29 100.0 36 ............................. CTGTCTTTATCAAAGTATGCTAAATTTAACTCCTCC 289750 29 100.0 36 ............................. AAGTAATGATACCATTCAATTTCAATTTTATGAAAA 289685 29 100.0 38 ............................. TATCTTTTTCTTCTATCTCTCTGCTTTTCTTTTCTATT 289618 29 100.0 37 ............................. ATGATATGGTTCTCTAATATATGTTTGTCCATATAAC 289552 29 100.0 36 ............................. GTACTTTTGTCTTGTTGAACATTATTTTTAGCTTCA 289487 29 100.0 36 ............................. TTAGAATAAAAACTATCATATCTTTTAATGTATATC 289422 29 100.0 36 ............................. ATTGTAGTTGAAGAACAAGTTTGTGGTTATATATGT 289357 29 100.0 37 ............................. GAAGTAAAAGTAAAAAATGCAGATAAAAGTAAAAAAG 289291 29 100.0 37 ............................. TATTAAAACTACATTTACTATCTTATAAAATATTTTC 289225 29 100.0 36 ............................. GTCTATAAAACGATAATAAACTATAATCATAAAAAT 289160 29 100.0 37 ............................. TCTTGTAACACTTTAACACTAGCGTCAGGTTCATTAA 289094 29 100.0 37 ............................. CCAAAATTTTTAGTTACTTCTTTTACTAATATATTTA 289028 29 100.0 36 ............................. GTCTGTAGCATTTAATGAAACAACTTCTTTTATTGT 288963 29 100.0 37 ............................. TCTTTTAACATACTTAATTCTTTTTCTAATGCTTCTA 288897 29 100.0 37 ............................. TCATTTAAATTATTAGTTGATGAAATATTTGCGCTAG 288831 29 96.6 35 .......................A..... GCAAGAGGTAAATTAAAATTAGGACTTTTAGAAGG 288767 29 96.6 37 ....................G........ AAGAGTTCTTTTTTCTGAATAATTCATATTATAATAA 288701 29 79.3 0 ...C............A.AA...C....T | ========== ====== ====== ====== ============================= ====================================== ================== 34 29 99.2 37 GTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : CATTTTATCAATGATGAAAAGTATAAAGTCTTAAAGGCATGGTGGTAAAGAATGTTTGTTATTGTTACTTATGATGTTGTTGAAGCAAGGTCATTAAATCGGATTAGAAAAATACTTAGAAAATATTTGACTTGGACTCAGAATTCTGTTTTTGAAGGAGATATTACCGATGGAAAGTTACATAAATGTATTTCTGAAATAGAAAATATTATTGATAATAGTGAAGATTCAATCTATGTTTATGAGATAAAAAATCCTAATTCAATTAAAAAGAAATGTTATGGTATTGATAAGTATTCTGATGAAATGTTTATATAGGTTTGCAGTGAGCGATATTTATGCTAAAATAGGTGTTAACAGTTGGAATATAAGGGATTGAAGGCATGTGATAACTATTATCAATTGCACTACTGATCGCTCACTGCAATTTTTAATATTTTTATTGAATTATAACTGCTTGAGTGTAGTATTTTCAATGTATTCAATTAGACATATTTTGG # Right flank : AAAACATAAATATTCTATAAATCTTGATAAGAAAGTAGTAAAAAATGAGGTGAAATAAAATTTATGATAAGAAAATCAAATAACAAAGATATAGAAAAAATAATGGAAATCTGGGAAGAAAGTACAATCAAAGCACATGATTTTATAAATAAAGATTATTGGAAAAATAGCTACAATACTGTTAAAAACGAATATATGCCTATATCTGAAACTTTTGTATATGATGATGGAGAAGAAATAAAAGGATTTATAAGTATTATAGATAATGAATTTATAGGAGCTTTGTTTATAAGTACAAATTATCAAAGTCTAGGAATAGGAAGCAAACTTTTAGATTATGCAATTAAAGAGTATAAAAATCTAAGCTTAGCAGTATATAAAGATAATAAAAAAGCAGTTGTATTTTACAATAAAAAAGGTTTTAATATAGTAAAAGAACAAGTAAATGAAGATTCAGGATTTAAAGAATATCTAATGGAATATAGTAAACAGCTTTAGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 77979-77688 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDC010000001.1 Clostridioides sp. ZZV14-6104 ZZV14-6104_262, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 77978 29 100.0 37 ............................. TATACAAATGAGGCTATTACAAGTGTTACAAATGCAA 77912 29 100.0 36 ............................. AAAGAAGTTGTTACAACTTTAAAAAATAATGGTACT 77847 29 100.0 37 ............................. AACGCTTTGTATTACACTTTTTATACCTTCCCATATC 77781 29 100.0 36 ............................. TAGAGGTACATCAGATAGTATGGCAGTGTTATTCGA 77716 29 86.2 0 .....................C.AA...T | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 97.2 37 GTATTATATTAACTATGTGGTATGTAAAG # Left flank : GGAGGTACAAAGTCACTAGAAAACTTTCATCAAGAGTCCACAGATATTGAGGATTCTAAATCAAGTGATAATGTACAACAAGATGCCTAGTGAGATATTAAGAATTAAAGATGAATATACTTCTTTTTGTTTCGATGAAGCTTGTATGTTTTTAGTAGATGCTATAAAAAATGATAAAAAGCTTAAATTTGAAAAGAATGAAAAGAAAACTATAGCTAAAAATGAGAGAAAAACTTTTGTCCAAATAGCATTAGAGAAAAAGAAAAAAGTTAATAGGTAAAATATTCTAAATGAATAGAGTGAATTAATGTTAATTTATGATATAATGATAATATAGATATTTTGCAGTGTACGATTTTTTATATAAATTGGATGTAATCATTGAAAGTACTATGATATAAGCATATTTTGTGATATATCAAAAACACTACTGGTGACTCACTGCAATTTTAATATTGTTTTATATGTGTAAGGATTGAAAATGCTCAATTTATTTTGGG # Right flank : TGAATAAACGCACAAAACACCTATTTAAACATATAGGTGTTTTTAGTGTGTTTAAAATATTTTTAAATAATTGGATAAATTTGCTAAATCAATAGACTAAATTATTAATTTTAGATAGAATTATATTTGAATAAATAATTTAATGAGGGAGATTATATTATGAAATTAACTAGAAAAATATTAGCTTTGACTATGATAGTATGTTTTTCTGTAATGATGTTTGTGACAGGATGTACTAGTGCACCAGCATCTAAAATGGAGGAAGTTGGTCAAGAAATACCAAAAGAAGAGGAAGAAGTACCAGAAGAAAGCATAGATAAAGATAAATTAAATCCAGATGAGTTTTTGGATTGTCAAATTAAAGAGTTTAAAGATGGTTGGCATGCATTAGCATATGTAGAAAAAAGTGTAAATAATGGTGAAATGCCCGAAAAAGGATTAAAAACAGTTGCTGATTTGTATGAAAAGCAGTTTAGTACTTTTAATGAAGAAATTGAAAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 12946-13173 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDC010000018.1 Clostridioides sp. ZZV14-6104 ZZV14-6104_279, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 12946 29 100.0 37 ............................. TTTGTACCTAGGTGTTAGTATAGCTTTTTGACACCAT 13012 29 100.0 37 ............................. AATTGTGATGGAGAACAACTTCAGAGTGTTATAAAAA 13078 29 100.0 38 ............................. AGGATATAATTTTTTATCATCAATAAATTCCTTTTATC 13145 29 79.3 0 G...................A.AAC.G.. | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 94.8 38 CTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : TAAATAAACAAGATAATATTATCGAAATTTTTACTAACGAAAACTCTTATTGTATATATCTAAAAGCTTTAAGCATTGAAAGTGAAGAATATCTAATAAGTAGACTAAAATCATTTTTTTGATTGTATATATTTTATAAGTAGAAAACAGAGTAGTTAAAACTACTCTGTTTTTGCAATTAAAATTTAAAAATGCATTATAGCTAAAGTGTATATATACGTTATAAAATAACTTATAAATAAAATTATTGATAATGTTTTAAAAAGTTGTTTTCTATATCTAATTTAATTATCAAACTGAGATTCTTATTAGATAAATTATGTTATAATAAATGTATAAATATGCAGTGTTCGATATTTTGAAAATAAAAACTGTAATGCTTGTAAACACTGCGTTACAAGGTGTTTTTGGAAAATATCAAAAAGCACTACTTGTGGCTCACTGCAAATTTATATATTTTCTATATCTTAAAGTATTGAAAATGCTCAATTTATTTTGGC # Right flank : GTGGTTTTAAACTACTCTGTTTTTATATAAAGTAAAAATAGAAATATAAATTAAGAAAGAAGTGTACATATAATTTATAAAATAAATTAAATAATAACTTTTATAAAATGTATATATAAATTTAAATAATTTTGGTTCTCTATACTCAGTTTATTTAATAAACGAAAATTTTTATTAGATAAATTATGTTATAATAAATATATAAATATGCAGTGTGCAATATTTTAAAAATAAACACTGTAATGCTTGTAAATACTGAGTTACAAGGCGCTTTTGGAAAATATCAAAAAACACTACCTTGCGCTCACTGCAAATTTTAATATTTTCTATATCTTAAAGTATTGAAAATGCCCAATTTATTTCGGAGTTTTATATTAACTAAGTGGTATGTAAATAGTTCATCACGTAATATTTTCAAAGTGGTTTTTTCTGTTTTATATTAACTAAGTGGCAAGCAGAGTAATTTTTAATTGCTCTGTTTTTTATTTACAAATTTAAGA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 19032-20368 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDC010000027.1 Clostridioides sp. ZZV14-6104 ZZV14-6104_288, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 19032 29 100.0 36 ............................. TTTTTAAAATCTAGTATTATCACCTCTTTTATATTC 19097 29 100.0 36 ............................. ATAAAGTATCTTGTGTAAGTCTTTTCTTTATTCTAG 19162 29 100.0 36 ............................. TTTAATTTCTTATTATGTATCTCTATACCTTCTGCA 19227 29 100.0 37 ............................. AGACTCAGAAACAATATCTCCATAAAAATATAACTCA 19293 29 100.0 37 ............................. GATAAAAGATTCGACAGACCTTTAGACTTAGATACTT 19359 29 100.0 38 ............................. AATTTTTACATAATTAAATTATAAAGAAGTCATGACTA 19426 29 100.0 36 ............................. ATAGAACCCCATCTGTCAAAACCTATCTCTTGAGTT 19491 29 100.0 36 ............................. TATCTACGTCTAAGTCTCTTATTAATGTGTGACCGA 19556 29 93.1 37 ...............A............T ATACGACTCACTATTTGTGCAGTATCTAAGTAAGATG 19622 29 100.0 36 ............................. AACATCATCAAAAGCATTGCGGATTATCTTGATGTC 19687 29 93.1 36 ...............A............T TAAAAAAATCCATTACGAAAAAACTTATTAAAAAGT 19752 29 96.6 36 ............................T TTGGTGAAGCTGTCTTGCCTCTTTTAAACGAATTTG 19817 29 96.6 36 ............................T ATTAGTAAAATTACTATTACAACAACTACTATGTTA 19882 29 96.6 36 ............................T ATAAGAGTAGTTTTAAGAGTAGTTTAAAAAAATAAT 19947 29 100.0 37 ............................. TACACTAATACCCCAAGACATTATTTTCCCTAATGCA 20013 29 100.0 36 ............................. TATCCAGATCCACCATTATAACATGCAAAGGAACGT 20078 29 96.6 37 A............................ AGAGAAGGACTTTAGAAAATTGCATAATACAGGTGAA 20144 29 86.2 37 ......G.........A...A.......T TGTGATTGGTCTGTAAAGAAAGTTACAAGATTGTTAG 20210 29 86.2 37 ......G.........A...A.......T AAAGGCAGTAGAATAACTATAAGATTGGATGAAGAAT 20276 29 93.1 37 ...............A............T TAAAACATTCTTTGCTAGTTCTAAGTCATTGTCTGTT 20342 27 82.8 0 .............A......-.-.A...A | ========== ====== ====== ====== ============================= ====================================== ================== 21 29 96.2 37 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : ATGTAGTTTATAAAATTGAGTAAATTCTATTGTATTAAATAATTTAGTTTAGTTTATTTTAGTTTTGAGGGGGATTAATACAATGATTGAAGATTTACTTAATGAATATAATATAAAGGATGATAAAGAGAGAGAAAAGTTTATAAAGTTTGCTAATTTACTATATGAACTACAAAAGAATAATAAAGAAAAGTTTCAAGAATTAACTAATATAATAAATAAACTTTATGAGAAAAAATTAGAGAAAAATAATGATTAAATAGACATATAAAGCACTTGAATATTTCACTGTTTCAAGTGCTTTATGTAGTAAAAAATGATATAATATAGGTAAGAGTTTTGCAGTGTTCGATTTTTCTACTCAAGTATAGTTTAACAATTGGAATACAAGGCATTGAGAAGGTTTGATAAGTGTTATCAATTGCACTATTGGTCGCTCACTGCAAATTTAAGAAAGTTATATATGTGTAAGTGTTGGAAATACTCAATTTATTTTGAGG # Right flank : ACTAAATAAACAAAGAAGCACTTACTTAAATAGTAGGTGCTTTTGTTATTCTTTGCTAGATAAAGTAACAAGTTCGTTAGGTGTACATTCAAGAACAAGACAAAGCTTTTCGAATAAATCTAATTTTATAGAACTTGTTTCATTGTTAGCTAATTTCATCATGTTAGGATAAGCTATACCTACTTCTTTAGCTAACCAATATCTAGTTTTGCCTCTTGATTCAAGCAATTTATCAATATTAAAATACATTTTTTCACCTCTTAAATATATTATACATTGATTATATAATGTTTGCAATATATAATATGCAAATAATATAATTATATAATGTTGACATTATATAGTGTGTACGATATAATATACTTAAGGAATAAAAAATAAGAGCCACTCGCCCCTACCAAGTTTGAGTAACTCTTATTGACATATACTACATATGCATTAATTATAGTATATGCCATTCCTTAAAAAAAATCAATTAAGGAGTGTGTTTTTATGAACAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 22090-22508 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDC010000027.1 Clostridioides sp. ZZV14-6104 ZZV14-6104_288, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 22090 29 100.0 36 ............................. TGACACATATTGCTAGCAATTCTGATGCTTCAGAAC 22155 29 96.6 35 ................C............ TTACAATATTCCAAGCTGCTGCGAATACATCATAG 22219 29 100.0 37 ............................. AGAAAATAGAAAGCTCCCACAATTACTCCAGTTGCAG 22285 29 96.6 36 ............................G GCTGGAATTAATGCGACTACAGTAGAAGAAAAGAAA 22350 29 89.7 36 A..............A............G GTTCTAAAAACATTTGCTATTCCAACTACACAAATA 22415 29 89.7 37 A............A..............G CGTATTGCTATGTTTGCTCCATCTATGAATGCTTTCC 22481 28 86.2 0 A...................-..T....A | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 94.1 36 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : CAATCAAAGGAGACAAGAAAAACTACTATATATTGTATAAAAATAATTAGATTTTAGTTTAGTTTTGAGGGGGATTAATACAATGCGTGAAAGTTTACTTAATGAATATAATTTAAAAACTGATGAAGATGTAGAATACTTTGTGAAGTTTGCTAATGCGTTATATGAACTAAAACAGAATAGTGAAGAAAAATTTCAAGAATATGTAGAGATATTGAGAGAAATACTTAGAGAGCAAGAAGAGAGAGAAAATAAGTAAAATAATATAGATAAAGCACTTGGATATTTCACTGTTTCAAGTGCTTTATTTGGTATAAAATGGTATAATAGAGATAAAAGTTTTGCAGTGTTTGATTTTTATGTTTAAGTATGGTTTAACAATTGGAACACAAGGTATTGAGAGTATACGATAAGTGTTATCAATTGCACTATTAGCCGCTCACTGCAAATTTAAGAGAGTTGTATATGTGTAAGTATTGAAAATGCTAAGTTTATTTTGG # Right flank : ATTAAAAATAATAAAAAACACTTACTTGAATAGTAGGTGTTTTTTAATTGAAAGGATGTGATTATAATGTAAAAATTTTACTTATATAGTATAATATTGCTATAAATTCATTATAATAAAGGGGGATATTATGGGATTATTTAGTGGAAATGAAAGTTGCTGTATATGTGGAGAAAAAGGTAAACAAAAAATATCTGATGGTGTAATATGTTCTGAATGTTTAAAAAAATATAAAGATACATTTTCTATAGTTGAACCAACAGATGTAATTAAAAAAATATCTTCTGAGGAAATAAAAAAATCAATAAGATTAACACTCGAAAATAAAAAACAATTTGAATCTTTTAATGCAAGTAAAAAAGTAGGAATTTATTTATTAGTAGATGAAAATAAAAAACAATTAATTATGTCTGATAAAATAAGCAATTTAAATAAGAATAAGAGAGTATATGACTTTAGGGATATTATTTCATTTGAACTTTTAGAAGATGATGAATCTA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.48%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 200120-200879 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDC010000008.1 Clostridioides sp. ZZV14-6104 ZZV14-6104_269, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 200120 29 100.0 37 ............................. AAAAATTTAAAAGTCTAAATACATCCTCTATATCTTT 200186 29 100.0 38 ............................. GTTATAGCAGAAATGGTAATTGGTCTAGATGAGTCTGG 200253 29 100.0 39 ............................. TTTAGAATATTTTCATTATCTATATCATTTAATTCAAAG 200321 29 100.0 37 ............................. AGAAATTAAAAAAAGATAAAGTAATCTAGTTTAATTA 200387 29 100.0 37 ............................. TAATGAAGTACAACAGAAGATGTGGTGCGACAATAGA 200453 29 100.0 37 ............................. CAGCAGATATAGAACTAGAAGATTTAGGAACATCAGA 200519 29 100.0 37 ............................. TTTATCAAATCATTAGATAAAAATAATTTGGAGGAGG 200585 29 96.6 38 A............................ AAATACTTAATTTAAAGCAAGTACCATGTTTAGTGCTA 200652 29 100.0 37 ............................. TGTTTGGATGCAGAAAACATACTTGATTATGTTCAAG 200718 29 100.0 37 ............................. TTTTTAGTAGGATGTTTAAATTGGTGGTGGTCACCAA 200784 29 96.6 37 ............................T GTAAATTTATTTGCTAGAAAGTCACAACTTAATTTCG 200850 29 86.2 0 ...............A......AT.T... | G [200871] ========== ====== ====== ====== ============================= ======================================= ================== 12 29 98.3 37 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : CTTACCTTTAAATATACTAATAATAAGATTAAATATAATAAATCCAACCGTTGAGCCCAAAGCACTAACAGGTACTGATGATATATTAGAGAAATTATTCAATGCTGATAGACATAACATTACTATAGAAACTATAACTAAATAAGATATGACTGTAAAAAATGGAATTGAAATACTTATATTTAACTCTGCTTCATATTCTTTCATAATATAATTCCTTTCAAATTAATTTTATTTAACTTTATTATAGCATTTAAACATAATTAAATGTAAAAATACAGTCAGAAATTAACTAAAAATATCAATTATATGTTATGATATAATAAAAATATAAATAGTTTTGCAGTGCGCGGTATTTTTGATAAAGTGTGGCTTAACAGTTGAAATATAAGGCATTGAGAACATATGATAAGTGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTGAGAGAGTTGTATATATGTAAGTATTGAAAATACTTAGTTTATTTTGGG # Right flank : GAAGTTACAATGAGTAGAAGAAGATTTCTATTTATTGTAACTTTTTTATTGCAAATTTAAAATTATAATATATTATAAAAATCATTATAAAAAGATGATTTAATAAAAAAATATAATTAAAAACTTGATTAATAATATATTAAATTGTAAGAAATATCCAACTGTCTACAAAATCTGAGTTTTTTATTACAATTACGAGTTTTTTATTGCATTTGAAAAATAAAAGTATTATTATAAAGGTAAGATAATTATCAAAGACAATTCTGAATAATCTAAAAACATTTCTAGAAATGAAAGGGTATAATTACATAAGTTTTATTAAAATTTATTGGGAGTTTTTAACTAAAAATAAGAACGTAAGTTCTTGTAACAGGGGGATAGTAATATGGAAAATGAAAAAGACAAACTCATCTTATCTTTAATTGAGTTGAAAATAAAGGATGAAGAAGATTATGAACTCTTTGCAAAAATGATTAAAGAAATTTATGAAAAAAATATAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //