Array 1 1966014-1963522 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP023366.1 Effusibacillus dendaii strain skT53 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1966013 33 100.0 34 ................................. CCGGAAATATTTTTATTCCCGCTAGAATCGCACC 1965946 33 100.0 34 ................................. GCAACTGCCCGCTGTGTTTGCTGAGCCTGCTGTA 1965879 33 100.0 35 ................................. AATCCGGTTATATTGAAAAACTCAAAAAGGCGGGA 1965811 33 100.0 33 ................................. TTAAACGATTTTTCAAACCGCCGCTCATCAAAC 1965745 33 100.0 35 ................................. AATCCGGTTATATTGAAAAACTCAAAAAGGCGGGA 1965677 33 97.0 35 ................................C AATATTTGTTGAGTTCCATATTGGTCGCCTCCGAT 1965609 33 97.0 35 ................................G AGGAATTCTGGAAGCACTATCCTAGGCGAATCGAG 1965541 33 97.0 33 ................................T TTCGTGGAACGAGAATGGAGAGAGAAATACGCA 1965475 33 100.0 35 ................................. GCTTTAGCCTGTCACCGGCTGTCAGAAGTCTAACC 1965407 33 97.0 32 ................................T GGAACAGTGGCTGAGTGAGCAGCCGAAATCCT 1965342 33 100.0 33 ................................. TCCCACACAAATATCAAGAGTACGCAGTACAAC 1965276 33 97.0 33 ................................T TGTCGGGATTCTCGTTATAAACGTTCTTTTGTT 1965210 33 97.0 32 ................................C TTGTCGGTCTGCAATCCAGTAGTACGAGAAGT 1965145 33 97.0 34 ................................T CCAAAATCTTGATTCGGCCGACAATCGTGTTGTA 1965078 33 100.0 32 ................................. CCTACTGCAAGAAAGGAGACTCAGTATATGGG 1965013 33 100.0 34 ................................. CCGACATCTCTTCTGCTGTCCAACTGGCCACCGG 1964946 33 97.0 35 ................................T CGAAGATACCGCTCTGGTATTGGGTCGTCGTGACT 1964878 33 97.0 33 ................................C AGACGAAGAATTGATCGGTCTATCTGACGACGA 1964812 33 97.0 32 ................................G TAACGTTGTGTTAGTTTTTCTTTACGTTGATC 1964747 33 93.9 34 ..T.............................C GTCCGGCGGTTGGCCGAAATGACCGGTTTTGGGA 1964680 33 97.0 33 ................................G GTTTGACACCATCCTCAAGAGCAAAACTTGCCA 1964614 33 97.0 33 ................................G TCCAAACCACCAAACAAATCCACCTACAACAAC 1964548 33 97.0 33 ................................T TTATCGAGTGTTACTTGCACCGATTTCACACGA 1964482 33 97.0 36 ................................T TGGCTGTACGAGTGGTTTGGTATTAACCATTCGGCA 1964413 33 97.0 33 ................................C AAATTGGCTACCGTTATCCATGACAGTAATCAC 1964347 33 97.0 33 ................................T CCTTGACACTCGCGCGGATGTCCTTCAAAAAGT 1964281 33 100.0 33 ................................. AAGAAAACGGGGGAACTATTAGGAAAATGTAGA 1964215 33 97.0 32 ................................T ATTATTTTTTAGAGACACAATACCCGTTGTTC 1964150 33 100.0 33 ................................. TTTGCCGCCAATCACTTGGAGTACTCAGAAAAA 1964084 33 97.0 33 ................................G GATGTTCCCGGATCGTATCTTTGTGGCCGAGTT 1964018 33 97.0 33 ................................T AGCAGAAGGCAGCCGAGTAGGTATTGCTCCGAC 1963952 33 97.0 33 ................................G GATTGGAAGCGTCACAAGCCGGACACGTGGCTG 1963886 33 97.0 32 ................................T AAGGTGGAGTCAGGGGAAAAGATGCCAAGCGA 1963821 33 100.0 33 ................................. CATGCAGCATGGTCTGACCGTCGTTTGCAAAAC 1963755 33 97.0 34 ................................T CTCCCAAAGTCCGTAAAGCCATCCTAGAACGAGA 1963688 33 100.0 36 ................................. CCGCTTGGTCGAACAATTCCTGAACAACCAGTGTAA 1963619 33 100.0 32 ................................. CGCTCGATGGATCACATACAGTTGATATTTTC 1963554 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 38 33 98.1 33 GTCGCATCCCTCGCGGATGCGTGGATTGAAATA # Left flank : ATCCACCTTTTTTGTGGAAGTAGGTGAAAAAGCTGCTGGTATTGATTACGTATGATGTAAGCACAGTTAGTAGTGAAGGTCAAAAGAGACTGCGTCTGGTTTCTAAAGCATGCCAGAATTATGGCCAGCGTGTCCAAAACTCAGTGTTTGAATGCGTTGTAGACGCCACTCAATTTACTGTTTTGAAGTTAAAGCTCCTTGATCTTATAGATCAAGAGCAGGACAGCCTTAGGTTCTATCAATTGGGGAATAATTACAAGAATAAGGTAGAACATTTTGGTGTGAAAGAGTCAATTGATATAGAAGGCCCTTTGATATTGTAGTACAAGTGGTGCGAATACGTAGTGCACATGGTTTTTCTGGGACATTCGCACCGAGAAAATGGTAGTACCAACCAATTCAAATACATTTTTTTCCACATTATTTAGGTATTTTATTGATTTACGCGTATTTTTGATAACAAATATGGGATTTCAGGTATATTTGAATCAAAAATCGCT # Right flank : CCAAAGAGCAAGCAAGTAAAGCGATCACCATACGTTGAAATTGTAGATAAATAATAAACCCTTGCCAACCATAATAAACTGATGAATCGGTTCAATTGAAACCGGACATGTATGACCCTAATGAGATGGAACGTCTGCGGGCAGAAAACAATCGGTTTAAGGGTCGGAGTATTCAGTTATTTCATGAAATTTAATGTTTGAAACAATTAATCCATTCTGAAACGCATTTGGAGCGTTGTTCTGAGAATAAGACTTCACTAGAGTTTATAAACGGGGAATTACAGTATTCAGAAAATCCGGCCACTTCGAGTAGGGTAACAAAACAATCTCCCATTGAAGAAAAAATCGCATTGTTTCGCGGCTACTTTAAAAGCCGGGAAGATGGTGGATGCAAGAACTCAGGCTAAAGCAAGGCCGTTTCAACATATCGTTATTCCAAGGTATACGGATTTCAAAGTGCCGGAATCGGGACCGAATGTTCCGATTCACGACATTTACGA # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //