Array 1 855860-857284 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFDUG010000001.1 Enterococcus lactis strain AnGM4_AISHA Scaffold_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 855860 36 100.0 30 .................................... CAAGAGATTTAGTGACGAAATGACAATTTT 855926 36 100.0 30 .................................... TTTAAAAATCGCTGTATCCCTTGATACTCT 855992 36 100.0 30 .................................... CTTGCCTTGTGCTAAGCATACCTCACATAG 856058 36 100.0 30 .................................... TTGAATATTATCCATGATTCTTCCCCAGTC 856124 36 100.0 30 .................................... CACTCCTATTCATTTATCACCTCGTTTCCT 856190 36 100.0 30 .................................... TTACCAACTGTTAAATCTTGGTCTGTGATA 856256 36 100.0 30 .................................... ACCAACCAACAATGCCGTCCCACCAATTAC 856322 36 100.0 30 .................................... AATACCGCCAGCTGTCGCAGTTACTAACGC 856388 36 100.0 30 .................................... GTCAGACCTGTTGTATACTCAGCTTCTTCA 856454 36 100.0 30 .................................... CTGTTGCTTTGTCTCACCACTAAATTTTTG 856520 36 100.0 30 .................................... GAACAGCATTGCGGATAAAGCTAATGGCGA 856586 36 100.0 30 .................................... TTCCAATGTTTCTCTGGTTACTTTATCTGT 856652 36 100.0 30 .................................... ATACCAGCTTTATAAATGGCTTGATCCACT 856718 36 100.0 30 .................................... TAATGAGGCTGACGTAAACAAATTATTAGA 856784 36 100.0 30 .................................... TGCAATGTTACACGAACTAAAAGAAGAAAC 856850 36 100.0 30 .................................... GTTTGATGATACTATTGTACGTGACAGTGA 856916 36 100.0 30 .................................... TTTTGACGAATCAACAACCGCTCTAGTTTT 856982 36 100.0 30 .................................... AATAGTTTTCGGTGGAGTTCGACGCTTGGC 857048 36 100.0 30 .................................... CGATAAAATCAAGTTAAATTTACACGTTTT 857114 36 100.0 30 .................................... AGAAATTTATTGGAAAAGTGTTCTAAGGTT 857180 36 100.0 30 .................................... CCATTTCCTACGAAGCTTTTTTCTAGCTTC 857246 36 91.7 0 .........................A....T....A | AC,G [857274,857280] ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.6 30 GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC # Left flank : GCCAGCTCAATGAAAAAGTAGAAGTGAAATCAATGATTGATAAACTGACAGCGACAATCAGTGAGCTGATTGGGTACGAGTTGTTGGATCACGAACTCGATTTAGAAGGAGACGAGATCACGGTCTTGGAATTATTCAAAGCATTGGGTATCAAGATCGAGACAAGAAGTGATACTATTTTTGAGAAATTACTTGAGTTGCTTCAGGTTTATAAATACTTGTCTAAGAAAAAATTATTGGTTTTGATCAATGTGTGTTCCTATCTCACGGAAGAAGAAATAAGCGAAGTGCAAGATTATATTTCGTTATATCATATGGAAGTGCTATTTGTAGAGCCGCGTTCGATCAAAGGGATAAAACAATTTGTCTTGGATAAAGACTATTTCTTGAACTTGGAAAACATGGTATAATGGTAAAAAAGAGAAGCGTTCAAAGCTGAAGTTTTGCTATGAACGAGTAGCGTGATTATGAAACATTGACGGAAAAATTTTTTCTGCGAG # Right flank : AACAGCCTTGCACTTATCGAAAGAGGATTAGTGTCAAGGGTGTTTTTCATATGAGTGGACGGAATTATCTGTTTTCTTTTACAATTGATAATAGATACTTTGCTGTATAGTCAGTAGCTGATATAAAAGTATCGGCTCTTAAATGGAAAAAAGATAGGTGGCGACGCAATGTTTAACACACAATTGATCGGTTATTTAGAATGGATCATTGCTATTTTAAATATTTGTTCTATCGGTATCTTAATTGCTGGGATCGTTCTTGTTCTATTCAAACTTTTTGATTGGTCTCATGTCAAGAAAAACTATGCAGAACGTAATGCTCGTAATGCAGATACAAGAAAACTGTTAGCAAGTTATATTTTGTTAAGCTTGGAAGTACTAGTCGTTGCTGATATCATCGAGTCAGTTATCAAGCCGACTTGGACAGATATTTTGAAGCTTGCACTTATTATTATCATTCGAACAGTCATTTCTTATTTCTTGAATCAGGAAATAGAAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //