Array 1 72178-73270 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHDO01000004.1 Lactobacillus delbrueckii strain SW-B10 NODE_4_length_105866_cov_334.228936, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 72178 36 100.0 30 .................................... CGGACACCGGGCGAACGTGGTTTGCATCCG 72244 36 100.0 30 .................................... CCTGCGTCGTTGACGAAGCTTTGAGACCTC 72310 36 100.0 30 .................................... CTACAATTTGTCTCATGAGAAGCAGAGAAA 72376 36 100.0 30 .................................... TTAGTCCAGACAGTGTAAGGATTGCCGGTA 72442 36 100.0 30 .................................... GTCACGTTCGTAGCGGCTTAAGGTCTGATA 72508 36 100.0 31 .................................... AACGTCCTGGGCAACGTCGACCAAACGACGG 72575 36 100.0 30 .................................... TGTGTGCTTAGCACCGTTCCAGAATTTGCT 72641 36 97.2 30 ................................C... CCCTCTACAAGCTTATCTTCTTGGCTATTA 72707 36 100.0 30 .................................... CGTCAATCTTTAAGGCGGTCCAAAAGGTCT 72773 36 100.0 30 .................................... GCAAGGCTACGGATCTGCGATCACGTATGC 72839 36 100.0 30 .................................... AATCACGGCCCACGCAAAGCCTTCAAAAGC 72905 36 100.0 30 .................................... GTCTGCCGAAGCACCAGTGGTGACAAGTAC 72971 36 100.0 30 .................................... AGCAGTACGTCGATGTGGATGAGGTGGGCA 73037 36 100.0 30 .................................... ACAAGTGTTCTACATTTTCTACATCGGTGT 73103 36 100.0 30 .................................... GCCGGGAGCTGAACGCCAAGCTGCACGACT 73169 36 100.0 30 .................................... AGCTCTTTGTTGGTTTCGGTGCTTTGTTTA 73235 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 99.8 30 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCACAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTCGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGTAGAACAGTTTAACGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATTATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTCTATTAAAGCCATGTTAAAAAATAACG # Right flank : CGTTGTGTAGGTTCAAATCCTGTACTCTCCTTGTTTTGGAATATTTCCATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTACTCATTCCACGCAGGTGGGGGTGATCGTTTTAGAAGATTGTTTATTCCATAGGGGACAAAAGTGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAATCGCTAAATCAAACGCTTCACCAAGCAAGCTGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCGTGGCGCGTTAAAAGAAGCCGGCCTTGACGCCGAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //