Array 1 41860-40509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPFL010000023.1 Parabacteroides distasonis strain 1001270H_150608_G7 NODE_23_length_65412_cov_26.3636, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 41859 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 41782 47 100.0 30 ............................................... ATCCGGAATAAGCACGGCACAGGAAGTTTG 41705 47 100.0 29 ............................................... TTCTCTCTCATCACAATAAACCTCGTATA 41629 47 100.0 30 ............................................... CTTATCGTACAGATAGGCCCGTACGGCACT 41552 47 100.0 30 ............................................... CTTGTCAGCGTCGGATAGATCCCCCGTGAT 41475 47 100.0 29 ............................................... GAAAGCATGTAAAGCTCTTGCGTTAACCG 41399 47 100.0 30 ............................................... AATTCTTTAGCGATGGTGGTGGCGTTATGG 41322 47 100.0 29 ............................................... GCTTTCAATATCCTACTAGCACCGAATCC 41246 47 100.0 30 ............................................... TATGCTTATATCAATATGTTAAATATCGTG 41169 47 100.0 29 ............................................... GCTTTTTAAATCTGGTAAAGAAATTAACG 41093 47 100.0 30 ............................................... AGGCCGCCGCTTAACAATGTGGTTTAGGTC 41016 47 100.0 29 ............................................... CGGTACTATAGCTCTATCTACCTTTAGAT 40940 47 100.0 30 ............................................... CCCCCTTGCCGTGCAGCGCTCCCCGACCGA 40863 47 100.0 30 ............................................... TATTTTGATCTTGACGATATATGTAAGTTA 40786 47 100.0 30 ............................................... ACCTTTTGCGCCTATAAGGAAATAGAAAGA 40709 47 100.0 30 ............................................... TTTTGTACTGAAGAAACTTCTGTTTTCCCA 40632 47 100.0 30 ............................................... CTGATAATGGGCTAGGAGCAAGAGGATGTA 40555 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 18 47 99.5 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : TCTAAACGCTTGGAGAATCGATTATTTCGAGGCAAGGTACGACTTGCTTCCAAATTCGAAAATATTTTTTCACAATAATCTATTGAACAACGCATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : ATATTATCTATTAAAAACTATTAATCAATGGATTACAAAGCACATCAGAATAAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGAAGAAAAGATTTAACTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGGCGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //