Array 1 29091-28131 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZRD01000064.1 Lactobacillus jensenii IM1 contig_64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 29090 36 100.0 30 .................................... ATATTGAATGGTCAAGAAGAAAATCGACGT 29024 36 100.0 30 .................................... GATTTTCGCATAAAGTTTCTTCAGTGACTG 28958 36 100.0 30 .................................... TAATATCTTTGACAAAATATAGCTATTAAT 28892 36 100.0 30 .................................... ATACCGTGGCGATTTAATCAACTGGTACAC 28826 36 100.0 30 .................................... GACTGGCTTCATCTCCAGAGGCTCTCATAC 28760 36 100.0 30 .................................... TGGAGCTGGTGGGTTCGGAGCAGGAGGCTC 28694 36 100.0 30 .................................... TTCATCTACTATGAAAAGCTTTGCTTCATA 28628 36 100.0 30 .................................... AGACGGTGTAATTGCTAGTTGTGAAGAGGT 28562 36 100.0 30 .................................... TAGAATATCGTCCTTGTTGCTTTGGTTTAA 28496 36 100.0 30 .................................... TCGTATTCCGTGAATGCTGAACGTAAGCAC 28430 36 100.0 30 .................................... TCATTGAGAGGTCACCAGCAATATGATTAG 28364 36 100.0 30 .................................... ACACCGCTACAGCAGTAGCAACTTTATTAA 28298 36 100.0 30 .................................... AGCGCCTAAAAGAGCTGCAGTAATTTCAAT 28232 36 100.0 30 .................................... TAAAAGTTGCTTTTTCTTTGATAAAGCCTG 28166 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 100.0 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAAGATTGTCTTAATTCTTATCTAACTAAAATTATTTCAAATTTATTTGAGAATATAAGTGAAAAGCATCGGAATAGAATATTTGATAAATGGAGGCAACTTAGCACCGATATTCAAGATATAATCTTTATGACTGACTTACCAATTGAAGTCAATGAAAATGTAGATTTAAAAAAGTTATTTAAATTTGATGGAATTCATTTTGATGATTCTGTACTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAATGTAAGTCATTATCTTACAAAAGAACAACTGAATAACTTAATTACCTTTGTAAAAGAAGTAAATGTACCTTTGATATTAATGGAATTTTCATCTCCGAATTTTAAGGTTGTTAGTGGGGATTCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTACAATCTGAGAAGCTGATGATAAAACGTCG # Right flank : TGTTAAATTTAAAACTACGTATAACAAAAAGTTTTAGAAGGTTGTAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGTATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATATGTTTTTAAAAGTTAGGAATTATCAATTTAACTCTGTATTGACTATAATTATTTTGAATGATAGCATAGCAAGAAGGGAGCTAAGCCTAGCTCCTAAAAAATTATTATTTAGTCATTTTATAAATTACTAATAGTTGAGTGATTATAATCAGTAATTTAATAACAATGTCTAAGCAGTCTTTTATAACGGCTATTCTATAGCCGTTTTTATTTTTGTGCTTTTTGTTTTAAAAGACTAGCGAATCCATGATTTAACGAACTCCGCTATTTGTATAGCGGAGTTATTTTTTCCTCTCAATTTAATACAAGTACCAAAGAACTTTGAAAATAATAGCAATTGGTCTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //