Array 1 910421-908737 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMCY01000001.1 Staphylococcus pragensis strain CCM 8529 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 910420 36 100.0 30 .................................... CATTTCTGGGCTATTCCACGCTTTTTCTAC 910354 36 100.0 30 .................................... AACGTGGAGCATACGGAAGCACAGGAGAGT 910288 36 100.0 30 .................................... AAAAAAATATAAAGATTTATTATTAGAAAT 910222 36 100.0 30 .................................... TGACTCACTTGACATACCTTCAGCACCAAT 910156 36 100.0 30 .................................... TTTTTTATCGTATTTATCTGGTTGTGGGAT 910090 36 100.0 30 .................................... GACTATCTTCCATAGTAGAAGCGTTTGTGT 910024 36 100.0 30 .................................... GACGTGACGCAGTAGAAACATATCGTTACG 909958 36 100.0 30 .................................... GAACTAAATTAGTTCTCTTAGGATATAAGA 909892 36 100.0 30 .................................... ATACACCTGATTTAAGTGATGAAAACTTTA 909826 36 100.0 30 .................................... TCTGAGCTTACTTTAGATGTATGTTCTACT 909760 36 100.0 30 .................................... TCAAACGTCGTCGAATATATGCACCTATTA 909694 36 100.0 30 .................................... CCAAAGCTTGTACATCAATTTGATTTGGTT 909628 36 100.0 30 .................................... GTCGACAGACTATAAACGGAGGTATATCTC 909562 36 100.0 30 .................................... GACCGTTCAAAAAAATTAATGACATTATAT 909496 36 100.0 30 .................................... AATGGTTTAGAGGAACACTAACATTCTGTT 909430 36 100.0 29 .................................... TACAGTAGAAGTTGATAGAGATACTACAT 909365 36 100.0 29 .................................... TTTTATTGTAGTTTTTGACACTTCGCAAT 909300 36 100.0 30 .................................... CTGATGAAGCTAACATCCGTTATGAAACAA 909234 36 100.0 30 .................................... GTAATGTAAAAAATAATTTTAATACTTACA 909168 36 100.0 30 .................................... AATTCAACACTCACGAAGCGTGGGAAGAGT 909102 36 100.0 31 .................................... GAATAACCAAACGCCTTTAAACCAACGTTTA 909035 36 100.0 30 .................................... CCATATGTTCCAATTGTTCCATAGTATATA 908969 36 100.0 30 .................................... AAGGTTATCAAGAAATAGATAATATTGATG 908903 36 100.0 30 .................................... GGATTGATTAAATATGACTGAAACAATTAA 908837 36 91.7 30 ........................A......A.A.. CCAATGGATTGCCTTACTTTACTCGCGGGC 908771 35 72.2 0 .............AC..AA....TA..G.-...T.A | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 98.6 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Left flank : AGCTTTATTGGAGTCACTAGGAGTTAAAATTATTGTTTTAACAGGATCGCTGCATTTTATGTCTAAAGAATGGAAATTTAATAATTATATAAGAAATGAAGAACAAAAGATAAATAATGATTTTATTGATAAACTACTTTGGCATGCACCTCTTAATTATCGAAGAAAAGAATTAGAAGAAAGTTTAAACCGTTTTATTTTAACTTATCATGATAAAATCGAAGTAAATCCTACAATATCTAATTATCAAATATCACAAATTATGTTATTTAATTCTATTGATTTGTATGTAGGAATATCATATTTACAACATTGTAATCATAAATTTAAGTTAAATCTTAAAGATGACCAATTATCAGAAAGTATTAAAAAATATATTGATCAATTATCAAAATATTAATTGATTAACTACATATATTAGATTTATTATTAAAGTAATGGGGGAGTTTAGATAGCTTCCCAGTACGTACTAAATTTTCTCTTACTAAATAGTGCTAGAG # Right flank : ATATTTAAATGTTTAATTAGTTTTGATTTCTAATATTTAAATTTAAATGAAGTTGAGAGGGGATAATATACTCGGAAAATCAGTAATCTTGGTTAAATGAAAAAAGGCTATTTTGAGTAATATATCTATAAAATACATAAGTCAATTAATAGTTGACTTTATGCCACTGTTAGAAATATAATATAGTTGTAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTATATGTCGTGTTTATCCCAACAATTTATTGTTGGGATTTTTTGTTTGAAAAATAATTATTTGTTAATCAAAAACGTCAACGAAGTTATTCTCTTCGCTAACGTTAATTTTATTTTTTAAATTTACTAGTTCTCATTTTCACTGGTAATTTTACCTAATGTATAACTACCGGCAAATCCAATTATCAATAATACGATTGCTATTAACCACTCAAATGAACCACTAGGTAAACCAGGGAATACGGCATAAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //