Array 1 37524-36609 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSNS010000019.1 Oscillibacter valericigenes strain An563 An563_contig-110_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 37523 33 100.0 36 ................................. AACGTGTGCCCGCATTGGGCGCAAATGGGATATTTA 37454 33 100.0 35 ................................. GTCTTATCCTCACGGATCCACTCATCGGAAAGCGA 37386 33 100.0 36 ................................. GGGAAATCCCGTTTTCCCCGCTCTCCCATTTGCTGA 37317 33 100.0 35 ................................. TTCCAGGGGGCAAGCTGTGCGGCAAACACGTCCCA 37249 33 100.0 35 ................................. CAATAGAGCCCCCGCACAAGACTTTTTCGGGAGGA 37181 33 100.0 35 ................................. CAAGGCTACCAACTCCAAAGGGCTTGCGGTGGGCA 37113 33 100.0 34 ................................. TCCGGCGTCAAATGCGGACTCGATATACTCGTAA 37046 33 100.0 35 ................................. ACAGCTGCGCTGGAAAGACCGGCTGCGGATCGAGA 36978 33 100.0 36 ................................. AATGACAAGTTGGCAGCGTGTACGAATGAGGCCGAA 36909 33 100.0 34 ................................. CAGCAGGGAAGCTGGCTAAAAAACGCAAAAGGTG 36842 33 100.0 35 ................................. CTCTCCAGTCGGAGAACATGCTGGAGGAGGATTAC 36774 33 100.0 33 ................................. ATCAAGGATGGGACGTCCCTCACCCTGCCGGTA 36708 33 90.9 33 ...........T..A.....T............ GCATACAACAAGAGAAAATTTTTTTAGGAGGTT 36642 33 72.7 0 .....C.....T.T.C..G......T....GCG | A [36623] ========== ====== ====== ====== ================================= ==================================== ================== 14 33 97.4 35 GTCGCTCCCCTCACGGGGAGCGTGGATTGAAAT # Left flank : CCTTCTTGTGGAAGTGAGGTGGCCGGATGCTGGTACTGATTACCTACGATGTGAATACGGAAGATCCCGCCGGCCGCAGGCGCCTGCGGCAGATCGCCAAACAATGCGTCAACTACGGCCAGCGGGTCCAGAACTCTGTCTTTGAGTGTATGCTGGATACTGCCCAGTGCAAGGTGCTGCAGGCCAAGCTGCTGTCCATCATGGACCCGGAGAAGGACAGCCTGCGGTTTTACTATCTGGGAAAGCGCTATGAGAACAAGATCGAGCACTTCGGCAGTCAGAGCAGCTACCAGCCGGAGGAACCTCTGATCCTCTGAGTGCGAAGGGGAAGCGAACTTCCTTTCCCCGGCAGGTTCGCACTGAAATGCCGCCGAATGGACAGGAGATTTTTAAAGATTTATGCGTTGAAACTGTAACCCAAACGCAACTCCTGTCTATTCCGTTTTGCGAAACGCGCATTTGTCACAAAATAAACCTGTACCTTTTGTGCGTTTTCGCTA # Right flank : CTAGTTGCCCCATCGTCATAGAGACCGGAAGGGAAATCCCTTCCGGTCTCTATGGTGAACTTCAGTCCCGCATGACGAGATTGAGCAGACAATTTCGCTGACCCGCTCTTTCAGCGGGTCAACAGCCCCCGGTCGATAGCTCTGTCTTTTCCCAGCCCAGCACCCGCCGCTTCATGCCCTCCACATCCAGCACCCCCAGGGCAAAGCCCTTCCGCACCAGCTCGTCCGGCACATATTCGTCGTACTTCTCAAACACCGGGACCTCTTTGGGGTAGACCAGCTCCAGCGGGTCAAAGTCCTTGGCCGCCTCTTCCGCTGTGATCCGGTAAAACTCTTCCGCAGAGGCCTTCATGGTGAATTGCAGATAGTATGGCCGGGAAGGGGACAGGCCCCGCAGCCCCAGACGCTGCCCACAGCGGATCTTCAAAAACCGCTCCAGGGCAAGAAAAGCGTAGCTGCCCAGCCAAGGGAACAGCGCCCACATATTCCCCCCGAGATGC # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCACGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.20,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //