Array 1 995101-992447 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP004387.1 Alcanivorax pacificus W11-5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================== ================== 995100 37 100.0 30 ..................................... GCGGGCCGAGCGCACCATCCTCGATCTGAA 995033 37 100.0 30 ..................................... TATTTTCTCGTCCGCCGTGCACGGTGCCGC 994966 37 100.0 30 ..................................... AGGCGATCCGAGAGCCAGAACACGATTGAG 994899 37 100.0 30 ..................................... CTGTCGTTGCTCGTGAACTTGATCTGCTCG 994832 37 100.0 31 ..................................... GCATGGCCTGTACGGATACATCGAATACCTG 994764 37 100.0 31 ..................................... CTTCGGCTTGCCGAATGTTGCAGAAACTGCT 994696 37 100.0 31 ..................................... CGAGGAGGAGGAGCGGGAGATGGAGGATACC 994628 37 100.0 30 ..................................... GGACCAGGGCCACAACCTGCTCCTGTCGCG 994561 37 100.0 30 ..................................... CAGATATCAGCCAGGCGCTTATGTTCTGGG 994494 37 100.0 30 ..................................... GCACGCGCGCCTCGGTCTGCTCGCTGTTCC 994427 37 100.0 30 ..................................... GCACGCGCGCCTCGGTCTGCTCGCTGTTCC 994360 37 100.0 30 ..................................... ATCCTTCGTCAACGAGGTAGAAGAAGATGA 994293 37 100.0 30 ..................................... CAGCATGACCGCGACCACGTTCGCACGCCT 994226 37 100.0 31 ..................................... CGAGGAGGAGGAGCGGGAGATGGAGGATACC 994158 37 100.0 30 ..................................... GGACCAGGGCCACAACCTGCTCCTGTCGCG 994091 37 100.0 30 ..................................... GCACGCGCGCCTCGGTCTGCTCGCTGTTCC 994024 37 100.0 30 ..................................... GTGACGCCGGATTCATCGACGCGCTCCTTG 993957 37 100.0 30 ..................................... GTCGCGCTCCTGCGTGACGCCCTCCTGCAT 993890 37 100.0 30 ..................................... GGACCAGGGCCACAACCTGCTCCTGTCGCG 993823 37 100.0 30 ..................................... ATCAGCCCGCAGGGCAGCCTCACGCCGCAG 993756 37 100.0 30 ..................................... CCGAACCGGCGCGACCCGACGCTCAGGGCC 993689 37 100.0 30 ..................................... TTTCCAGGCAGGCGGCCGTGGCTTCGCCCA 993622 37 100.0 30 ..................................... GATGCAATTAGAATGCAGCACTCGTTGACC 993555 37 100.0 30 ..................................... AATAATCGAATCAACCCGCGCAGCCAGCAC 993488 37 100.0 30 ..................................... GGTCGGTGTATAGGAACGATTACGGCTCCG 993421 37 100.0 30 ..................................... TGAGCGGGTGTTCAACAACATCATTGAGGG 993354 37 100.0 30 ..................................... GGGTGAGTTGCCGGCATTCAATGCCCCCTT 993287 37 100.0 30 ..................................... GTTGAGCATCCGCTGTATCAGATCCTGCAC 993220 37 100.0 30 ..................................... ACTCGCTGGCGCAGCTGTGCGGCTGTGTGT 993153 37 100.0 30 ..................................... CCAGTTGGCTCTCCAATCAAATGCCCGTAC 993086 37 100.0 30 ..................................... ATTCCGGCGCTAATCGATCAGGATTACATC 993019 37 100.0 30 ..................................... CAGGAAACCTCGATACCGTCAAGCGTCACC 992952 37 100.0 30 ..................................... CTCATGAGTGGCAAGGATGTGCTTCACCAG 992885 37 100.0 30 ..................................... TCGCAGAGCTGCCACCAGCGTGGTCATGGT 992818 37 100.0 30 ..................................... GTTCAGGGAGGCGATGTGACCCCATTCACC 992751 37 100.0 30 ..................................... TGGAGACGGTCCATCTGCTCCTGCCACATA 992684 37 100.0 30 ..................................... CACCTGGCGGATAGATGTCGTACTCCGCAT 992617 37 100.0 30 ..................................... GAGCAGTACGGCCTGCGCTCCATGCTGATG 992550 37 100.0 30 ..................................... GAACTGTCCGGCCAGCACGCGGACCCGCAT 992483 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =============================== ================== 40 37 100.0 30 GTTCCGATTCCCCACCATCGGAAAGTTCGATAGCATC # Left flank : ACCGGCGACCTGTCATCCCTGCCACCCCACCACGGAGGCCGCCATGGAGAAAACCTGGATCGTCGTCGCCGACAGTACCCACGCTCGTATCTTTTACGCCTGTAATCGCGTCCAGCCACTTACCCCCGTCACCGAGCTGAGTTTTCCGGAAGCCCGCCTGCGCACTCAGGACATCTACAGCGACCGCCCAGGCCGCGTTTTCGAAAGCGCAGATGAAAGCCGCAGCGCGATGGAGCCGCCAGACGTACGGGATCAGCAGCAGCATGCCTTCGCGCGGGAAATCTGCGAGAAACTGGACGCAGGCCGCAATCAGCAAAAGTTCGCCGCACTGATGCTCGTGGCCCCACCCGCGTTTCTTGGCGCCATGCGGCACAGCATGAACAGTCAACTGGGCAAGATGGTGGAGAAGAATGTGCAGAAGAATCTGGTGATGGAAGAGGAAAGTCGGATTAGGGAGTATTTGTTTAACTGAGCTACCAGAGCGAATGTTGCTGCTTGAA # Right flank : TGAATCACTCCAACTCCTTGATGGAGTTGGGGTTTTCTTTACCTAAAGCAATGATTCGAAGTGATCTGCTAGATCAGCATAATCTGCTCTGGAGCATCCGGCCGGTGCTGGTAAGGCCTTGGCCCAAGAAATTCTCGCGTCATACCGTACTGCTTGTCCGTCATGAGCATGAAGGCCACCTTGGCCCCAGGGGGAATCTGGTGCTTAAGACGCTGAATCATGGCCTCGGCAGCTGCCATGGTCGGAAAATGACGCACATACAGGGAATACTGAACCTGTATGAACGCATGATTCAGCAAGCGCTTGCGAAATACCGTGTAATCATGCCGGGCTTCCGGCGTGGTCATGGGGCAGTCGTATACGGCGATTAACCACATGACTCTCCACCCATTGATTGCCATGTTGCATTACGGGCACTCCGGCAGCTCCAGCTTGCGTCTGCGCCCACCCCCTCCTGCTTCCAGAATTCGAAGATAGCTCGCTACCGTCTTGCGAATCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGATTCCCCACCATCGGAAAGTTCGATAGCATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCCGATTCCCCACCATCGGAAAGTTCGATAGCATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //