Array 1 161564-159220 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCPJ01000026.1 Klebsiella pneumoniae strain COL-Kpn109 contig_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 161563 29 100.0 32 ............................. ATCTATTCCAGCATCGAGCTGCACCCGCAATT 161502 29 100.0 32 ............................. GTGGTTCGGGCGGCTCCGCGCAAAACCACGCA 161441 29 100.0 32 ............................. CACCGCGTTGCTGTTCCCGCCGGTCGCCGCCG 161380 29 100.0 32 ............................. ATATCGCCGTCGCAGTGGTAGAATCGGTCTTG 161319 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 161258 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 161197 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 161136 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 161075 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 161014 29 96.6 32 ............................C CGCTGGTTAATGGGCTTCCCGGAAGGGTGGGC 160953 29 100.0 32 ............................. TCTATCGCAACCACCGCTGAGGCGCTGATTGA 160892 29 100.0 32 ............................. CCAATTCATTAAAATACTCTGCAAGTATATCG 160831 29 100.0 32 ............................. CCGCTCCACGGTGAGCGGCTGTTCAATGTAGT 160770 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 160709 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 160648 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 160587 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 160526 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 160465 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 160404 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 160343 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 160282 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 160221 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 160160 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 160099 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 160038 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 159977 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 159916 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 159855 29 100.0 32 ............................. AACGTAATTGGCTTACGGGGCGGTCGGCACAA 159794 29 100.0 32 ............................. TCGCCGCCTGTTTTTGTCTCTTTCCGGGTGAG 159733 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 159672 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 159611 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 159550 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 159489 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 159428 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 159367 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 159306 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 159248 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //