Array 1 15651-11853 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDJ010000006.1 Clostridium algidicarnis strain CM029 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 15650 36 100.0 30 .................................... TTATATTTTCTATATCTTCATCTAATTCTA 15584 36 100.0 30 .................................... TAGATTAAACTGGGGAAGAGTAAACTTTAG 15518 36 100.0 30 .................................... TGTAGATTTAAACAATATAACAACAGTTAA 15452 36 100.0 30 .................................... ATAGAGCTTTACAATATGCTACAGATGTAG 15386 36 100.0 30 .................................... AAAAAGAAGGCAAGTATTTATTACACTCAA 15320 36 100.0 30 .................................... ACTAAAACAATTTTGCAACGTAGTACCAGT 15254 36 100.0 30 .................................... GCCGTCATTATCGCATAGCCTGTAGCTACT 15188 36 100.0 30 .................................... CAATTGAAGAAATGGTTGAAGAATACAAGG 15122 36 100.0 30 .................................... ATAAAAGTGGTTTAACGGCTAAAGCAGTGT 15056 36 100.0 30 .................................... ATGCTAAAGCTTTAAAGGCACTTTTAGATA 14990 36 100.0 30 .................................... GGGTTTATTGCTATATGGTGAACCAGGCAA 14924 36 100.0 30 .................................... TACGTAGAGATAATAAAAAGGTTAAAAAGG 14858 36 100.0 30 .................................... CGTACAAGATATATTACAAAACAACCTAGA 14792 36 100.0 30 .................................... CTTACGAACTTGAAGCTACGGAAGTGACAA 14726 36 100.0 30 .................................... ATGTAGATAATGCTTTAAAAGAGATTTGTG 14660 36 100.0 30 .................................... TTAAATTATATTTATTAAAAATATAAGCAC 14594 36 100.0 30 .................................... AATATTAAGGGTATTGTTGTAGAAATAGGC 14528 36 100.0 30 .................................... ATTAATCTCTTCTACGCTCCCTACTTCTTT 14462 36 100.0 30 .................................... TCTTTTTCTCTTAAAGATATCATACCACTT 14396 36 100.0 30 .................................... CTAGATTTAGATTATGTTGTTGGTGATATA 14330 36 100.0 30 .................................... AAAGGTTTTAGAAGATAACACCATTCTAGT 14264 36 100.0 30 .................................... TTGAACCAGGTTCTGTTGTAGCTTCTCGTG 14198 36 100.0 30 .................................... ATAAGTCACGCTTACCAGCTATCTATGCAA 14132 36 100.0 30 .................................... TGATAGTATTTACTGGAATGGCACAGGCAA 14066 36 100.0 30 .................................... AATTTGAGAATGAATATACCAAAATTGCAA 14000 36 100.0 30 .................................... AGGTAAAAAGATAATAATACTAATTGTTGT 13934 36 100.0 30 .................................... ACTTAATCTCCTGTTATAGCTATCTTGCAA 13868 36 100.0 30 .................................... ATCCAGCATTCTATAGTGCTAATCCATTTA 13802 36 100.0 30 .................................... CGTTGCTTAAACTAAGTGATAAAGAAAAGA 13736 36 100.0 30 .................................... TCTTATCTGACGAATAGCTACCTTTCCTTA 13670 36 100.0 30 .................................... ACACTTCAACATAAAGAATGTTTTTATTCT 13604 36 100.0 30 .................................... TGACACTATGAGAGCAGCGTCACAGTATTT 13538 36 100.0 30 .................................... AGGTAGAAAGCCACTATGCCTTTAGGCTAG 13472 36 100.0 30 .................................... ATTTGACACAATGGGCAATAAAATAATAGA 13406 36 100.0 30 .................................... TTTCTTTAAGACTAGTAAGCTTCTTGTCAT 13340 36 100.0 30 .................................... TACTGCGCAAATAAATTTGTAGTGTCTATT 13274 36 100.0 30 .................................... TTTTAAATTGAGTGTCTATAACCAAGTTAT 13208 36 100.0 30 .................................... ATTCTATACCTTCTACATTTTTACAAGTCA 13142 36 100.0 30 .................................... TTTTAAATTGAGTGTCTATAACCAAGTTAT 13076 36 100.0 30 .................................... ACTCTATACCTTCTACATTTTTACAAGTCA 13010 36 100.0 30 .................................... AAGAAAGCATGGATGGCCTAGTTGAGGCTG 12944 36 100.0 30 .................................... GCAACAAGGTCAAGAATGCTTTGTGGATAT 12878 36 100.0 30 .................................... TTTCCCTCTGTCTTTCCACCTAAATATCCT 12812 36 100.0 30 .................................... AAAGATATGCAATATTTATAGCACTATTAA 12746 36 100.0 30 .................................... GATGAAAATGGGTATCCGTGTTTGAATATA 12680 36 100.0 30 .................................... CCTATGACACAACGTTATATGAAACCCAAA 12614 36 100.0 30 .................................... AAAGAAATAGATGATTGCAAAGAAATGGTA 12548 36 100.0 30 .................................... GCAATAAACATCTTATCCCTCCAGCATCTT 12482 36 100.0 30 .................................... TTAATCCTAATTGTGTTTTATAATCTGTTA 12416 36 100.0 30 .................................... ATTGTACCTGCCCAGAATGCAGATATAGGC 12350 36 100.0 30 .................................... TTTAGTCTTAGGGTTAAAGGGACAAAATGG 12284 36 100.0 30 .................................... TGAAAATAGTAACTTTACCGCAATGAAAGG 12218 36 100.0 30 .................................... AATAGGATAATAATGAACGTCTAAGATTTG 12152 36 100.0 30 .................................... CCTGTGGCCCATTATAATGCCTTTATCCTT 12086 36 100.0 30 .................................... CTACATCACCATCCAGTTGGCCTTGCACAT 12020 36 100.0 30 .................................... GGTAGAAATAACCCAAGCTACAAATGATGG 11954 36 100.0 30 .................................... TTTGAATTTCAATATTATGAGCCATCCTAT 11888 36 83.3 0 .............................CACC.CT | ========== ====== ====== ====== ==================================== ============================== ================== 58 36 99.7 30 GTTTTAGAGTTATGTTATTTTAGATGGTATTAAAAC # Left flank : ATTTGTTAGAAAAATTCAATGATGTTATAAAAAATATAAATGATATTATTTCTAGTTATGATTTTGAGTTTGAATACAAGAAAGAGATAACAATTAAAGAGCTACTTAAAACAATCAATTTTAAGTTTGATAGTAATTACTATGATAATCCCTTTGATAACATTATGTGTATATTTGATTTGGTATCCACGTTTAATTTATATAAAGTAATTATAGTGGTAAATGCAAAATGTTATTTTGAAGAAGAGGAATTAGAAGAAATATATAAAGCAGCTAAATATAGAAATATAAATCTTTTAATAATTGAACCTATTATAGAAGTGCAATTAAAATATTTGGAAAATAAATTAAGTATTGATAATGATTATGATGAATTTATATTTAAAATGTAATATAATAAAAGTATGCTAAATATCTCTAAAATAACAAATGATTTTGTTATGGGTTATTTATACTTTAAGATGCTTATTTGAGGTTTTAGAGTTATGTTATTTTAGATG # Right flank : TTACAAGTAATTAAAAATAACTTCAATAAAAGTCAGAAGTTTTAATTAATGTTTCTATATTAGGCTCTAATTTACCATTTCATAGTTAGATAATTGATATCTACAAAATTCTGTTATAAAGTAATAAGGGCATCTATTTAGTGGAAATATCCTTATTACTTTTAATAGATTTACACTGTTTTTTTACACCATAGTTAAAGTTACATATAAATATATGTAGTTTTATATGGGGGCAAAGTGGTATAAACATTGATTTTGTAGATGTTTATAAATTTTTATAGAATTATGAGTTTAAAATCAGGGGTTCGATTCCCCTAGGAGTCACCAAATGTTAGAATATAAAGATTTGAAGGAATTCAGATCTTTATATTTTTTTTGTTTTAGTAAGGGTTTACACGCTATGAAAATAGTGTTTTGTTTAAAATACAATGATAAAAAACTAGTTGATTTTTAAAAGTAAAGCTTTATCCCTTTTCAATTTTAGTAAAAGTAAGTATAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTTATGTTATTTTAGATGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //