Array 1 115161-112907 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072358.1 Prevotella multiformis strain F0096 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 115160 37 100.0 37 ..................................... CGGACGACTTCTTCCGCACAGGCGTGAACTTCACCAA 115086 37 100.0 37 ..................................... CAATTCAGGGTGTTCGGCAAGATAAGTCTTATTATAA 115012 37 100.0 34 ..................................... TTGCCAAAAGATACTTTTAATTATTACTTATTGA 114941 37 100.0 34 ..................................... CTGCGAAAGTTTTCTCTGAAAAGTTATTTGCGAT 114870 37 100.0 34 ..................................... TTACAGTCATGATATAGACTGTTTAAGAACGAAG 114799 37 100.0 34 ..................................... TCTTAGAGGCTACCAAATCATTGAACTCCTTTAA 114728 37 100.0 34 ..................................... CATAGGATTCTCATCCTTCGGAACCTGCTTAATC 114657 37 100.0 37 ..................................... ACCTAATTTAGTAGCTGACTATACATTCCAGTTATTC 114583 37 100.0 34 ..................................... CCGCCAACGTATCGGGTATCTCTACTGAAGATAC 114512 37 100.0 33 ..................................... TTTCGGGCATCCTGATTCTCAACCTTAATAGGT 114442 37 100.0 32 ..................................... ACAAAGAGAGTTGGTAGAACTCTTTGGACACG 114373 37 100.0 37 ..................................... TACTCTCTGCTCCCATTGTTAACGACCGTTTCGCCAC 114299 37 100.0 34 ..................................... TTAACGGTTACGAGGATTTCTGTTTTTAGAACTC 114228 37 100.0 36 ..................................... TCGTTTAAAGAAAACGGCTTTGCATTCTTCGCTTGA 114155 37 100.0 30 ..................................... AACGAGCCAAACTCCAACGTACCGTTTTCA 114088 37 100.0 36 ..................................... ATTATAGCCAATATGCTTACCACCTTCAATAGGAAA 114015 37 100.0 34 ..................................... GGTAGTTCTTTAAGTCTACGGAGTCATTTATCTG 113944 37 100.0 36 ..................................... TCTTGATTCTGCAGTGTTACAGCTTCGTCGACAGAA 113871 37 100.0 34 ..................................... TCTACACACGTTAGCAGACCCGTTGAAATCTGCC 113800 37 100.0 32 ..................................... CGCGTTTGCACCCATATCGGTTATATCGATTA 113731 37 100.0 36 ..................................... ATCAGGTCTCAGAACGACAAGGCGCCGGAATGGTAG 113658 37 100.0 33 ..................................... TTCACATACTCATCTGAAAGAATTTCTTTTTCT 113588 37 100.0 35 ..................................... TCACATATGTTTTTTTTACCATTAATTATCATCGG 113516 37 100.0 35 ..................................... ACGGACGTCATTGCACGTGTGCCATGAGAATCGCA 113444 37 100.0 36 ..................................... ATACTCTAGTTCTGATATAACAAGAGTTTGCATCTT 113371 37 100.0 32 ..................................... CGCGTTTGCACCCATATCGGTTATATCGATTA 113302 37 100.0 36 ..................................... ATCAGGTCTCAGAACGACAAGGCGCCGGAATGGTAG 113229 37 100.0 33 ..................................... TTCACATACTCATCTGAAAGAATTTCTTTTTCT 113159 37 100.0 35 ..................................... TCACATATGTTTTTTTTACCATTAATTATCATCGG 113087 37 100.0 35 ..................................... ACGGACGTCATTGCACGTGTGCCATGAGAATCGCA 113015 37 100.0 35 ..................................... CTTTCTCAATTGTCACGCTTCCGTCCTTGACGACC 112943 37 97.3 0 .........C........................... | ========== ====== ====== ====== ===================================== ===================================== ================== 32 37 99.9 35 CTCAATGAGTATCTTCCATTAAAACAAGGATTAAGAC # Left flank : CTTCGTCATGTATGATATAGAGAGCGACAAGGTACGCTATCATATCGCAAAATATCTGGAACGGAAAGGATGCACACGCATCCAGCGTTCCATCTTCCTTGCCGACCTCGACAAGACCGTCTACGATGAAATTAAAAGCAACCTTGCCGAGGTGCAGTCGCTTTACGACAACCACGACAGCATCATCGTCTGTCCTGTCTCCAGCGATCAGATCCGGGCAATGCAGATCATCGGTGAAGACATCAGCATAGATGTCATCATCCGTTCGCGCAACACATTGTTCTTCTGAAGACGGCAGCGAGAATGCCCTCCCCATGAGGGAAAACATCAGCGATGCTTCCTCCATAAAGAATATTTAACGCATCGATCTTTGACTTTCTGCACAATTTTTCGTACCTTTGCACCCGCTTAAAATATGGTTAATTTCTCCTAATTCATCAAGCATTTTTAAGTCTTACACGCATGGGGCTGCGGCATATAAAGGAATACAAGTCTTTACT # Right flank : TTTGCAAGAGTTCGCTTTGCGTCCTCAACCTCCACTCAATATTAGAACATGGATTCGGAAGTAGAACTTTTTGGGGCAGAAGAATGATGATTTATAAATTAAAAGTAGTACCTTTGCCACAACATTTGATTTATAAAACTAATTTGTAGTATGGTTAAAATCACTTTCCCAGACGGCTCCGTTCGTGAATACGAACAGGGGGTGACTGGTTATCAAATCGCCGAGAGCATTTCGCCGGCTCTCGCCCGTGACGTTGTATCTTGCGGTGTCAATGGCGTAACGACAGAACTGAACCGTCCCATCAACGGAGATGCGACCATCGCACTTTACAAGTTCGATGACGAAGAAGGCAAGCACACTTTCTGGCACACCTCTGCTCATCTGCTTGCCGAGGCATTGCAGGAACTCTATCCGGGCATTCAGTTCGGCTTCGGCCCGGCTGTGGAGAACGGCTTTTTCTATGATGTGATGCCGGCTGACGGTCAGACCATCTCCGAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAATGAGTATCTTCCATTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 1369136-1360174 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072357.1 Prevotella multiformis strain F0096 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================= ============================= ================== 1369135 49 100.0 28 ................................................. GTTAATGCGGTAAACAATCCAGCCGGCA 1369058 49 95.9 28 ...............................................CG TTCTCGCCGCCGGTGTTGTTCAGCACCA 1368981 49 100.0 28 ................................................. ATCCATCAACCGTCAAAATTGGTACAAA 1368904 49 98.0 27 ...............................................A. ACAAGCAAGAGGTGTCAATTCATAACC 1368828 49 98.0 27 ...............................................A. ACAAGCAAGAGGTGTCAATTCATAACC 1368752 49 100.0 28 ................................................. CAGCAGCAGACACAATAGTGTCGACACC 1368675 49 100.0 28 ................................................. AACGCAGAATAAGAAGAAAAAAGGGTTG 1368598 49 98.0 28 ................................................G ATAGATTCCTTACCAACAACCTTGCCAT 1368521 49 95.9 28 ...............................................AC GAACCAAAAAATTAAAAGCCGGATAGTC 1368444 49 98.0 28 ................................................G CGCATGCCTGACGAGTACTACGGACTGG 1368367 49 95.9 28 ...............................................CG TTCGGCTTCAGAACTCGCATGCACTCGT 1368290 49 100.0 28 ................................................. CTGATGGAAACTACTGGTGTAGGACTAT 1368213 49 95.9 28 ...............................................AC GGTCGCGCACCGAACTGGACATCATAGC 1368136 49 95.9 28 ...............................................AC CAGACAGCATCTTGTCGAGGATCTGCTT 1368059 49 95.9 28 ...............................................GG GGGGCTTATTAAGCCCCCCTACACCCCT 1367982 49 95.9 28 ...............................................AC GGCCTGGAAAGAATTTTGGGCGATTATA 1367905 49 95.9 27 ...............................................CA GACGGGAACGTAAACCTCGAAGTCATA 1367829 49 95.9 28 ...............................................AA CAGCCTGCTTGAGTTCAGACGAAGAGAT 1367752 49 100.0 28 ................................................. TAAAGCAGACGGTACTTTGAAAGTTCAA 1367675 49 100.0 28 ................................................. GACAGCCTGCAGAGGCACACCAGCAGCA 1367598 49 95.9 28 ...............................................AC AAATGATGGAGACAACACACGAATCCAT 1367521 49 95.9 29 ...............................................AA AGTAGAAGAGGAGATAGAAAGGCCATTGA 1367443 49 98.0 28 ...............................................G. TCATCAATCAGATACTGCTTGGTCGCTT 1367366 49 98.0 27 ...............................................A. CAATAAAGATCATAATTTCAATAAATT 1367290 49 95.9 28 ...............................................GG CGTGGACGATGCCACCCTCCAGCGGATT 1367213 49 98.0 28 ...............................................G. GAGAGCAAATAATGATGCTTTCTCCTCA 1367136 49 98.0 28 ...............................................C. TGACGAATGGAGAATGTGACGGCATTCC 1367059 49 95.9 28 ...............................................GG GGGGCTTATAAAGCCCCCCTACACCCCT 1366982 49 95.9 28 ...............................................AG ACGCACGCATATCAGCTATACGGCGTTC 1366905 49 95.9 27 ...............................................CA AAGCAGCAACACTCAATCCTGCATCTT 1366829 49 95.9 28 ...............................................GC CTAATTGAGGGTAACGCAGGAGCTGTTT 1366752 49 98.0 28 ................................................A CAGTAGCATTGGACGATGCTGCGGAGAA 1366675 49 95.9 28 ...............................................AA ACACATCTTCGGATTATACCAGGCACGC 1366598 49 95.9 27 ...............................................GA GGAAACTAATAATGTAGAAACTGCTTA 1366522 49 95.9 28 ...............................................AG TTAGCTCAACGATAGACTTGTAAAGCGA 1366445 49 98.0 28 ...............................................A. CTGATAGTGATTTTATAAAATACCCGAA 1366368 49 98.0 28 ................................................A AAATCAAAACTCATAAAATATTTATTTT 1366291 49 95.9 28 ...............................................GA TGAGACAGGAACAGGTTTTGGAATTCTA 1366214 49 98.0 28 ...............................................C. AAATCAAACGGTTAGACACTGAATCAGG 1366137 49 98.0 29 ................................................C GTAGCCGAGGGCATCGAAATCAACAGACG 1366059 49 95.9 28 ...............................................GA CTTACCTTGCTTAATCAAGTTGTCACGT 1365982 49 98.0 28 ................................................G AAATACGTAACAAAGCAATAAGGAATAT 1365905 49 98.0 29 ................................................G ATAATTACGAACCAAACGAAAGAGACTAG 1365827 49 100.0 28 ................................................. GGTTTCAATACAGATAATAACGAGTTCT 1365750 49 100.0 28 ................................................. GGTTTCAATACGGATAATAACGAGTTCT 1365673 49 98.0 27 ...............................................A. GATAGATGTATTTATACCGTCATACCA 1365597 49 95.9 28 ...............................................CA TAGACAAATAACCTTCTGCCTTTCTTTC 1365520 49 98.0 28 ................................................C AAGTTAAACACGAACGGCGCAGAATGAG 1365443 49 95.9 27 ...............................................AG GCAAGAACTTCAAGGACATCCCGACAT 1365367 49 100.0 28 ................................................. GCAAAGGCGAACGGCAGTCTTACAGCAA 1365290 49 95.9 27 ...............................................AG GTTGACCAAAGCGTCAAGCACCTCATT 1365214 49 98.0 29 ................................................C ATGGCCGGATGCATGAGAACCTCCTTCTA 1365136 49 98.0 27 ...............................................A. CGTAGAAAGGATGTCTATTTCACAGAT 1365060 49 98.0 27 ...............................................G. GTAACAAATTGACGGTTACAAAACAGT 1364984 49 98.0 29 ................................................A ACAAGCGAGGGCAGCAAGTAACCTATTTG 1364906 49 98.0 28 ................................................C TATCTTGTGCGTTTCACTCACTTCTGCT 1364829 49 95.9 28 ...............................................AG CTGCAACGGTATCGACAGGCGAGACCTG 1364752 49 95.9 28 ...............................................CG AGGGATGAACCCAAAGGATTCGCCATCA 1364675 49 95.9 28 ...............................................GG GGGTCTGAATCAGACCCCCTACACCCCC 1364598 49 95.9 28 ...............................................CG CTGACCGGTCTTGATGCTCTGACGAGAC 1364521 49 98.0 28 ................................................C CGACCATCAAATTTCAACTTCTCACCCT 1364444 49 95.9 28 ...............................................CG CTGACCAGACTTGATACTCTGACGAGAA 1364367 49 95.9 27 ...............................................GC ATAGAATAGAGGCGCTCTATGAAAGAT 1364291 49 95.9 28 ...............................................AA TCGGGGTATATGGCAGTCATCCCAAGCA 1364214 49 100.0 28 ................................................. TTTTAACAAATCAGAAGAACGAAGATAA 1364137 49 95.9 28 ...............................................GA CATTACGAGTTGGGAAGTAGTTGTCGAA 1364060 49 98.0 28 ................................................C GATGAGCGGAAGTACGGTGCTGCTATCG 1363983 49 95.9 28 ...............................................CA TGCGGAACTGATATACACCGTCAGATAT 1363906 49 95.9 27 ...............................................CG CACGTTTTTGCTATTGGTCAAGTCTTG 1363830 49 95.9 29 ...............................................GC ATGCGTCAGGCGCAACATGTCCGACTGAA 1363752 49 98.0 28 ...............................................G. CAAGTGCCTTGCCTTGATTTGCGCCAAG 1363675 49 95.9 28 ...............................................CA ACATACAGGACTATACTGGGACAAAGGG 1363598 49 98.0 28 ................................................G AAGCACTCTATAGGTCGTTAACTGAGGC 1363521 49 95.9 27 ...............................................GC ACTCGGGATTCACACAGATTGATTTAT 1363445 49 100.0 27 ................................................. GTCTGATACGGCTTTCTTAAGAGTATA 1363369 49 95.9 28 ...............................................CG GCATAACAGCATTGCGCACTAGCTGTCT 1363292 49 95.9 28 ...............................................AA AACGAAAGGCGCAGAATGCGACGAACGG 1363215 49 95.9 28 ...............................................GA CCTGACGATCAAAAAGGTCAGAAAAATT 1363138 49 98.0 27 ...............................................C. ATCAAAATAGCCCAACTGAGGGTAACG 1363062 49 98.0 28 ................................................A CGAGAAGTATCATTATCCAAACGAATAC 1362985 49 98.0 28 ................................................A AATCCCCATTCAGAAGGACCAAATCCTT 1362908 49 98.0 28 ...............................................C. CAAGGACTTTTAAAAACGTCTTTAGGGA 1362831 49 95.9 28 ...............................................GC TGAAGCAGCATTGGAAAGGAATTGTCCT 1362754 49 98.0 28 ................................................G AGCCTGAATCTTCCGTTGCCGCATCAAA 1362677 49 95.9 28 ...............................................AG TGATTCAACAGTATAGGCATCATACGGC 1362600 49 98.0 28 ................................................G TGGATGTGGTGACGGCGCAGTCTATTGC 1362523 49 95.9 28 ...............................................GC CATCGTCAAAGTTACACAGACGGAAGTC 1362446 49 98.0 28 ................................................A CACCGGCCAGCGGTATATCTCCTTTTTT 1362369 49 95.9 27 ...............................................CG TAAGAGGAAGTAGTAGCACCGCTGGCG 1362293 49 98.0 29 ...............................................C. CAACCTGCCTCATGACAGTAACAGGCTCG 1362215 49 98.0 28 ................................................A CACCGGCCAGCGGTATATCTCCTTTTTT 1362138 49 95.9 27 ...............................................AA GTTAACAAGTGACTGCACCACGTAATT 1362062 49 95.9 28 ...............................................GA GAATCTGTTTCCAGTCATAGTTGGACTT 1361985 49 98.0 28 ...............................................C. CGTTCAGGCAAAAAAGAATCGGTCTGCT 1361908 49 98.0 28 ...............................................A. GACGCACGTAGCGAACTCCTTACGCATC 1361831 49 98.0 27 ................................................G TAAAGTTATTGTCATGAGGTTCAGAAG 1361755 49 95.9 27 ...............................................AG TCGTCAGGATAGGTGTAATAGCAGTAT 1361679 49 95.9 27 ...............................................GG GGGGCTTAATAAGCCCCCTACACCCCT 1361603 49 95.9 28 ...............................................AG ACGAGCCGTAGACACGACCATGGTTGTC 1361526 49 95.9 28 ...............................................AC ATCAATCAGATACTGCTTCGTTGCATCG 1361449 49 95.9 28 ...............................................AC CACGGAATACGTTATACAACCGGCGGCC 1361372 49 98.0 28 ...............................................G. AGATGGCAGTCATGCCGATCAGGAAACC 1361295 49 95.9 28 ...............................................CA TCTGGAATTGATACACGCCATCCGACAT 1361218 49 95.9 27 ...............................................AA GTTAACAAGTGACTGCACCACGGAGTT 1361142 49 95.9 28 ...............................................AA CAAATGAAGCAACGTCATGCGTGACAGC 1361065 49 98.0 27 ................................................G AATCGGATAAAGGATCTTTTCAAGCTT 1360989 49 95.9 28 ...............................................AG ACGAGCCGTAGACACGACCATGGTTGTC 1360912 49 95.9 27 ...............................................AG AATCTGTTTCCAGTCATAGTTGGACTT 1360836 49 95.9 28 ...............................................GC ACATCAATCAGATACTGCTTCGTTGCAT 1360759 49 98.0 27 ................................................G AAATCAAAATCAGAAACAGACGAAGAC 1360683 49 98.0 28 ................................................G GGGGGCTTAATAAGCCCCCTACACCCCT 1360606 49 98.0 27 ................................................C CAGCTGCCGTCACCGGACAGCATCTTG 1360530 49 95.9 27 ...............................................GG GGGGCTTAATAAGCCCCCTACACCCCT 1360454 49 95.9 29 ...............................................CG ATATGCCATTGAAGAGTTTTCCGGCAGAA 1360376 49 95.9 28 ...............................................AG ACTTTCGACGCTGAAGTCGTTGAACTTC 1360299 49 98.0 28 ...............................................C. GAATCGGATAAAGGATCTTTTCAAGTTT 1360222 49 98.0 0 ................................................C | ========== ====== ====== ====== ================================================= ============================= ================== 117 49 97.1 28 GTTGTGATTTGCTTGAAAATTCCTACCTTTGTGGTAGCAACAACAACTT # Left flank : GCGTGCGATCTGCACCGGTGTCACAAAGAATTTTACACTGTCGGAAGTCCGGGAGAAGTACCATTTAGGCAGCTATTCCAATGTGAACCGGCTGAAGACAGCCCTTCTGGAACGTGACCTGATAGAAAAGGAAGGAGAAGAACTGAAAATAACCGACCCTGTTTTCCACAAGTGGTTCCAAAGGAGAATGATGGTATAATTCTGAGTTTCCTATTCATCTAAGTGTACATGACGATGATATAGCCTCAAGCTTCATATTCAGCATGTTCAAGGCGATTATATAACTTCAAACTTCATATTCATTAAGTAGGGTGTGTCAAAATGCAGATGAATAACTTGACAACTTTCAAACTATAAGCAGGTTTTTCCTACAACAAAGAAAAGACCATTTCTTTACTCAGAATCGAGTACAGAAATGGTCATTTCTATTGGATTGTTTCAAACTGTGAGATTATCAAAATGGTATTTGCATTTTGACACACCCTCTACACTTACAACAT # Right flank : ATTGAAGACAAATGGTTGACTATCAGATGGATGGGTTGTCGTTTGGAAAATAAAAAATACCACAAGGCAAAAGTCCTACACTTTAAGGTGTGGGACTTTTTGCTTACTATGACATAAGGAATAAGAAAAATATGATACTTCTTGTCTGTTTTACCATTACTTCTACGAAACTCTTATTGAAGGTGCATTTTAAACTATTGTTGTTCGGAAAATAATGCTTGAAATTCCTATAGCCTTTGTTTACCGGAAATACAGGCACATTTATCCAGTTTTATTTTGTTTCAAGTAGTAACCGTTACAGGAAACTATAATCTGAATGACTTTTATCCAAACATTCAGAGAAAGATACTCCAACTGATACTTTTATCCTTAATTCCGTAACTAAACACGTAATTTATTATTAATATGTATTATAAGTATCTGAGGAACAATAAGTTCCTAAAAATTTTGCTATCTGTATGATTTTCACTGACTTTATGGTGCAGAACAAATAGTACGAT # Questionable array : NO Score: 4.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:-0.5, 7:-0.02, 8:1, 9:0.12, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTGAAAATTCCTACCTTTGTGGTAGCAACAACAACTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.70%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTGAAAATATGTACCTTTGTGGTAGCAACAACAACTT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //