Array 1 21728-22944 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJETQ010000015.1 Staphylococcus pseudintermedius isolate 18S03468-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21728 36 100.0 30 .................................... ACAAGCGAACGTTTTACAGTGAGTGCGTTC 21794 36 100.0 29 .................................... AAAACTGGTGTCAAACCCGTGATATTATA 21859 36 100.0 29 .................................... AAATCTTTGAATAACACATGTGAAAAGTT 21924 36 100.0 29 .................................... TAATAACCTCTTCTATCACACGTTGTGCT 21989 36 100.0 29 .................................... TAAAATCAGAAACGAAAGGGCAAGCAGTA 22054 36 100.0 29 .................................... CAAAATCAGAAACGAAAGGGCAAGCAGTA 22119 36 100.0 29 .................................... CTTTAAACTTATTTCTTAAATCTAAATCA 22184 36 100.0 30 .................................... GTAATACTTTGCACCTAGATAGCGATACAG 22250 36 100.0 30 .................................... TGTCATTTGTTGAAAGTGTTGAGTACTTGC 22316 36 100.0 29 .................................... GAAGTATTGGGTTTATTGGCCGGTCCAAT 22381 36 100.0 30 .................................... GAACTCTGTTAACACGTGAATGATGTAATC 22447 36 100.0 30 .................................... AAATAGATGAGGAAACTTTTAATAGTATCA 22513 36 100.0 30 .................................... ATATTGAGCATATTCAATTTGTTTTTCAGT 22579 36 97.2 30 ............................A....... CTGTGGAATATTTTGAGTAACTTCTGTTGC 22645 36 94.4 30 .............A..............A....... CAACGTGCCATTTGTCATGTTTTTACGCGT 22711 36 97.2 29 ............................A....... AAACCGAACGCGCTTATATGCTTTTACGT 22776 36 97.2 30 ............................A....... AATAGATTTTATCTTCTAATTCTTTGATGC 22842 36 97.2 30 ............................A....... GTTATGATGTTTGGCGATATGGGTCGTCGT 22908 35 88.9 0 ..........................-.CA.C.... | TC [22941] ========== ====== ====== ====== ==================================== ============================== ================== 19 36 98.5 30 GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Left flank : TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTGCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGTGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG # Right flank : CCTTCTTTATAATCGTACATCAACCTCACTATGCCTTCAAAATAAATAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTACGAATCTCTCGATTGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCGCATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATGCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Alternate repeat : GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //