Array 1 16735-15313 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZUT01000023.1 Neisseria meningitidis strain Neisseria meningitidis isolate B215, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 16734 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 16668 36 100.0 30 .................................... GGCGGATGGCATACGGCGTGCCTTTTCGGT 16602 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 16536 36 100.0 30 .................................... CCGTCACTACACGAACTGGCGGACTTCTTG 16470 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 16404 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 16338 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 16272 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 16206 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 16140 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 16074 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 16008 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTTCTATACA 15942 36 100.0 30 .................................... TTTGCTGCCCGACAATGCGCGTCCGCAGAT 15876 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 15810 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTTCTATACA 15744 36 100.0 30 .................................... TTTGCTGCCCGACAATGCGCGTCCGCAGAT 15678 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 15612 36 100.0 30 .................................... TTCCAAAGTTTTAATTTATATTATTTTAGT 15546 36 97.2 30 ............................A....... CAGAAGATGATAACTGTGCTGGGGGTGCGT 15480 36 100.0 30 .................................... CTTTCACTTCAGTAATGGCTTCGGCATATA 15414 36 100.0 30 .................................... TAACGATTGAAAGTGAGTATGTATTAAGTA 15348 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTGTCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //