Array 1 24965-27381 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTWJ01000022.1 Ruminococcus sp. AF24-16 AF24-16.Scaf22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 24965 32 100.0 36 ................................ GAGATTGGGGGAAAGTAATATGGCAAGCAAGACATT 25033 32 100.0 33 ................................ TTATGTGATCTACCGGTCTTCAATCGACTCTCC 25098 32 100.0 33 ................................ GATTCCATGCCACCAAAGGACTGGCAAGAAGCC 25163 32 100.0 34 ................................ AGGTATAGCAAACAAGCCATCGAAAGGTGGCTTT 25229 32 100.0 33 ................................ ATACTGTCTACTTCTGTAATTCCTACTGCATAA 25294 32 100.0 36 ................................ ACAAGTTGTGTAAGGAACGTGATATTGATTGTAAAC 25362 32 100.0 33 ................................ CTTCTCTCATATCCATACTTCAAATTGTCTGCT 25427 32 100.0 34 ................................ ATATCACAAAGATACATTGGAAAAATTAACGATT 25493 32 100.0 35 ................................ AAAAAGCCAATGGAACTTGCAGAACGGTTTGCAGA 25560 32 100.0 32 ................................ AATTGTTCTTTTAAATCCATTTTTCACTCTAC 25624 32 100.0 35 ................................ TAAGCTGCCATTTTCTGCTTCCATGCTTCGATTGC 25691 32 100.0 34 ................................ AATTGTTACGGTACTTCCTACTGTAATACCTTTG 25757 32 100.0 34 ................................ ACCCTCATTTGTGTGCCTGCCAATCAGGAACACC 25823 32 100.0 35 ................................ AAAAATTCCATGTTCTTCTTCCTTTCTCCGTCATG 25890 32 100.0 35 ................................ ACCCCTTTCAGAATTTCAATGAATGCTTCATAGCT 25957 32 100.0 33 ................................ ACTTGATGCATAACCGACGATATTCTTATAAAC 26022 32 100.0 35 ................................ ATTTATAACAGGACAATAACAGGAAAACAGGAGGA 26089 32 100.0 34 ................................ ATCTCATGCGTGGCATTTGGGAAAAACGGCGAGT 26155 32 100.0 34 ................................ GTTCTCCATCCATTGAGTGACCCTAAAATGAAAC 26221 32 100.0 35 ................................ AGTTATCAGAAATGCAATTACAGATAACAGAAATG 26288 32 100.0 33 ................................ ATAAGAGCGCTTGAAGAAGCCATGCTAAAAATA 26353 32 96.9 34 ...G............................ GTCGAATGGGGAACTACAAAGCAACCACCACAAG 26419 32 100.0 34 ................................ AGCCAGGCTTCCGTTAATGCGCGCTTCCAGTTTT 26485 32 100.0 34 ................................ ATACTTGCGCACGAATACATATACATCCTTTTTG 26551 32 100.0 35 ................................ GATGATACAGAAGAAGAAAGAGAGGAAAATGTCGG 26618 32 100.0 33 ................................ GTACAGCTATCAAAGCCAGTATCTTTGAAAATC 26683 32 100.0 33 ................................ AACCCGAAATACGGGATTTTCTCGATAGCTTTC 26748 32 100.0 34 ................................ ATACAAGAATGGCTGGCTTGTAAAAAACAAGGAC 26814 32 100.0 36 ................................ TTTCTCCCTTTGAAAGTCTTACAACTGGTAAAAGTT 26882 32 100.0 34 ................................ GACAATCTCCGGTCCCGCTTCTGCCACGATCGCG 26948 32 100.0 34 ................................ ACCAGTCCTTCGCCGTGTCGGTTACTCTGGTAAG 27014 32 100.0 33 ................................ ATCACTCTGCACCGATGTAGTTCAGGACTTTCT 27079 32 100.0 36 ................................ GCCTGCTGTTCCTTCCACTGTTCTTCGAAATCTATC 27147 32 100.0 36 ................................ GCATTACTCTTGACCGTTGTTGTGTTGGATGCTCCC 27215 32 100.0 35 ................................ AACTGACTGCTTTGCAGCATTTAAGACAAGTGCTG 27282 32 100.0 37 ................................ CTTGAAGAGTACGGCGTTAATCATCGTTGTAGCAATA 27351 31 71.9 0 TGGT..T....-...G...G....A....... | ========== ====== ====== ====== ================================ ===================================== ================== 37 32 99.2 34 GTCATCCTCTTCGTGAGGATGTGAGTTGAAAT # Left flank : TAGATGAATACCCTCCGTTTTTCTGGAAGTAGGTGGAAAGATGTTAGTTTTGATTACATATGATGTAAATACTCAAACAGCAGCGGGAAGAAAACGATTGAGAAAAGTTGCAAAAGAATGTACTAATTATGGACAGAGAGTACAGAATTCGGTATTTGAATGTCAAATGGATGCAACCAAATGTAGACAAGTAAAAAATATTTTAGAGAACATTATAGATAAAGAGGTAGATAGCCTTAGATTTTATTATCTGGGTGAAAAATATAAAAATAAAGTAGAGCACATTGGTGCTAAGCCTGGTTTTGATGTTAAGGATACGTTGATATTCTAGTGCGAATGATAAGTGCACATAAATTTCCTAGGACATTCGCACCAAAAAAGGAGAAAACTAGGCTTAAAAATATATGTGAAAATGAAAAAAGATATCAACAATAGATATAAAATGTTTATTGCTGATATAATATGCGATTTTAAACAGATTATTTTTGTTTAAAATTGCT # Right flank : TATTCTTGATAGTCTTTCTCAGCTTCGCGTGAAGGAGTCACTATTATACATCATTTAATTTGAATATTAAACTCAATTATCGAAATCTTAGAGGAAATTTTTACATGTGTTCTTAGAAAAAATGAACAACACCTAATAGTCTCCCTGATTTTCATATGGTATTTGAATGTAGAATAAAGTTCCGCAGTAATAATAATAGATACAATTAACAATATAGATGATATCTAGATTTTAACTGTCAAACTCCTGATTTGGCTATAAAAGTATAGATGAAAAGTAATTTGAAATTTCATTTTTGAAAAATAAATACTATAATTAAGATGGCTTGTCACTCCTATATAAACGCGGTATAATGAATTTATCAATAAGCAGTCTTTATAAAGAACGAAAATAAAGTTAGACCACATAGTACTTTTTGACAAAATCAGGACTGCGGAAAAGGAGGACTCAAATATGAAGATAGACATGCACTGTCACGTGAAAGAGGGGTCCATAGACAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCTCTTCGTGAGGATGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //