Array 1 51903-54443 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPCN010000003.1 Streptococcus lutetiensis strain D52t1_170925_A12 NODE_3_length_166551_cov_23.4633, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 51903 36 100.0 30 .................................... TACCGCACCGCAACATTATGCATTGTTCGT 51969 36 100.0 30 .................................... AAACTTGTTAGAAACATGAATGATGATGAA 52035 36 100.0 30 .................................... TTAGATGATAAATTAATGTTGCATATTGTG 52101 36 100.0 30 .................................... CGTTGGCGTTCTCCTTCGCCTAAGAGTACA 52167 36 100.0 30 .................................... ATCATACCATGGTTGCCAATGACCCTCTAA 52233 36 100.0 30 .................................... TCACTCAAAGAAATAACTTTTTTAAATTCT 52299 36 100.0 30 .................................... GTGAACACAATTATATTCACCGTAATAAAG 52365 36 100.0 30 .................................... ACAGGAAATCTCACAACTTAAAACAGCACT 52431 36 100.0 30 .................................... AAAATCAGAAGCTGAAAGTAATAAAGCGTA 52497 36 100.0 30 .................................... TATTTTGAATACTCTTCTTTGATGTTTTGT 52563 36 100.0 30 .................................... TTAAACGTGTTGGAAATGACTTTGAGAATA 52629 36 100.0 30 .................................... TGAAAGATAAAGACGGTAATTATGTCACTG 52695 36 100.0 30 .................................... ATGTGCCAAGGTCAGCCAACGGCGGAAAGG 52761 36 100.0 30 .................................... AATATGGTCACATGGCAGATGGTTTGTCTG 52827 36 100.0 30 .................................... TTTGAAACGTTATCCAACTGCTAAACAAGC 52893 36 100.0 30 .................................... CCTTGTCCAGAAGCTAAAATTTTAACAAGG 52959 36 100.0 30 .................................... ACATACGGCAAGTTATTATAAATTCAATAA 53025 36 100.0 30 .................................... TTTTCTTTTGTGGCTTTAGCAAGCTCGTCC 53091 36 100.0 30 .................................... GTTTGTCTGTTCAGAAAACGAGCGTGGACG 53157 36 100.0 30 .................................... GTGTCATAGAGTGACTTAACGTTTTCTTGC 53223 36 100.0 30 .................................... TAGATAAGCCGCTTAAAGAAGCACCATTCT 53289 36 100.0 30 .................................... TTATGGAAAGCAAAAGCCGTCACACCAGCT 53355 36 100.0 30 .................................... TATCCTTTCTGAATTCGTCTAAACTGACTT 53421 36 100.0 30 .................................... AATTAGCTGGTAAATTACCACCAACAGATG 53487 36 100.0 30 .................................... CGAGGTGTTTCATCTAAGAAGTCAAGACCA 53553 36 100.0 30 .................................... ACTTTTCTTATTTTTGTGGTTATAACGTCA 53619 36 100.0 30 .................................... ATTTAGAACATGAGGAAAGATAAAACTACA 53685 36 100.0 30 .................................... GGATTCTGAATCCACATGCCTTTATCTTCG 53751 36 100.0 29 .................................... CAATTAGGACAGAGATTGTATTTCTTGCT 53816 36 100.0 30 .................................... TAGTCTCAATAGCGAACAATTAGGTGTTGC 53882 36 100.0 30 .................................... AATGGACTAGACGTGACATGGACTTTAACG 53948 36 100.0 30 .................................... CAGTGAGCCAGTGGGCTGGATTGATAGCCC 54014 36 100.0 30 .................................... CATTACGTGAATCATTGCGCCTTAATTCTA 54080 36 100.0 30 .................................... CTAAAACTGTTGAAGATGATTTGTCAGGAA 54146 36 100.0 30 .................................... GATTGGGTTGACTAACCACAAAGGATACGA 54212 36 100.0 30 .................................... TAAACACGAAAAAACAACTTAACTGATTAG 54278 36 100.0 30 .................................... ACAGAAGCTTATAATCATGGTAAACGATTT 54344 36 100.0 30 .................................... AAAAAATTAAAAACAAAATAGAAAGAGGAC 54410 34 83.3 0 ......................--C...ACC..... | ========== ====== ====== ====== ==================================== ============================== ================== 39 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGGCTGATGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAAAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG # Right flank : CCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCAGAATTGAGTTTTTATTACCTTTGATTAATAATAACGCTTTCTGCAAAATTTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCGGGTCACGTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //