Array 1 63855-62867 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTRC01000052.1 Pseudomonas aeruginosa strain AZPAE14939 AZPAE14939_contig_52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 63854 28 100.0 32 ............................ AGCCATCGCGCAAGAGCTGATCAACATGGGCG 63794 28 100.0 32 ............................ TGGCCAATGCGGTCGCGCTTCGCCCAGCTCAC 63734 28 100.0 32 ............................ TGTAGGCGCTCTACGCGAACGGCGGTGATCTC 63674 28 100.0 32 ............................ TGGAGTACTGTCGTTGCTTCGTTGGCTTGGAT 63614 28 100.0 32 ............................ TCGGGGCTATGCCCATGTCTCTGTCGTGGTGT 63554 28 100.0 32 ............................ TGTCGATCTCGTCCAGCAGGGCGAGGACGGTC 63494 28 100.0 32 ............................ AATGGGTGCATCTGCGATTCTCGATGCAGTCA 63434 28 100.0 32 ............................ TCGCTGGTGTTCGTCAGCAGCCGGGCCTGGAG 63374 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 63314 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 63254 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 63194 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 63134 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 63074 28 100.0 32 ............................ TGCGCCCTAAATCAGTGATCCGGCGAATTTGG 63014 28 100.0 32 ............................ TCGCGCAATGATTTCAGCCGCGGAGCGCATAG 62954 28 100.0 32 ............................ ATAGATAACACGTGTGACCGCGACCACTACCG 62894 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 17 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //