Array 1 2322725-2324465 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006905.1 Clostridium baratii str. Sullivan chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 2322725 29 100.0 38 ............................. AATTTTGAGAAGAAGCCTATACCTTGATTTGCTGCAAA 2322792 29 100.0 39 ............................. AAAAGTTTTAGATTTACTTAATGGTATAAATTCAAAGCG 2322860 29 100.0 37 ............................. AAAGTTAAAGAAAAGGCTACAAGACAATTTACAGTTA 2322926 29 100.0 36 ............................. GGGTTAGAAAAAACAAATCTAATCCTGGCATCTTTA 2322991 29 100.0 36 ............................. TTATGGATAGCACAGTATGGATCAAGTACGGTAATG 2323056 29 100.0 37 ............................. GGGGGAGACAGATGTCCCCCACCCAAGGACATATAAT 2323122 29 100.0 36 ............................. TAATCCATCTAAGACCTATTTGATATAAATAATAAA 2323187 29 100.0 37 ............................. GGTGAAATTACGATTGATTATCTTAGTTTAGGCAATC 2323253 29 100.0 38 ............................. CAAAGTCGTAAATTTGGATGCAAGTTTATTTTCAGTAC 2323320 29 100.0 38 ............................. AAAAAAGTTAATTGTTCTTGAATATCTTTTACTGATAA 2323387 29 100.0 36 ............................. ATCTAAGGAGCTAACAATGTTAGTCATGTCTTCCGC 2323452 29 100.0 37 ............................. AGGATTTTATTATGTCAATTGTTAAGGGTACTGTAGC 2323518 29 100.0 36 ............................. TTAAATCTTATCACTTGTCCTGTAGGCTTATAGGTA 2323583 29 100.0 38 ............................. AAATATCAATGCGGAGATCAATTAGTTGTTTATGATGG 2323650 29 100.0 36 ............................. AAACCACCAAATTTACAAAGAGATAATCTTATTTGG 2323715 29 100.0 37 ............................. TATGCTAAATCTGCATTTACATCACAATTACCAGGTG 2323781 29 100.0 37 ............................. CTATATAATGAACTTATTATACCTTCATAGAAAGAAT 2323847 29 100.0 37 ............................. GTAAATCAATTCAAAACAACTCTTTCTTTAAAGCATT 2323913 29 100.0 35 ............................. GTTATACCGCCCGTTTGGATATTTTCACTTGATAG 2323977 29 100.0 37 ............................. ACATACTATAATTTTCTATCTGAAAAATATGACAAAA 2324043 29 100.0 36 ............................. CTGCTATAGTGTCAAACCTTGTTAGGTCTATGGTAA 2324108 29 96.6 36 .................A........... TACTTAACCCTAAAAACATTAGAAAAAGCTTATGTG 2324173 29 100.0 37 ............................. TCGAAACTACCTTGTCCTACAAAATATCTTTTCCTAG 2324239 29 100.0 37 ............................. AAAGGAGAAAAAGGCGAAGATGGAAAACAAGGCGAAA 2324305 29 96.6 37 .................A........... TTTCAAAGCATGATTGTAATGTCTTAGGTATGAATTG 2324371 29 93.1 37 .................A.A......... GGTATTAATTAGTTATTTGGGAAATGACTCCTTTAGA 2324437 29 93.1 0 .................A..........C | ========== ====== ====== ====== ============================= ======================================= ================== 27 29 99.2 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : AAGAATATAGACCTTTAAAGGCGTGGTGGTAAAATGTTTGTTATAATTACTTATGATATAAAAATTCAGAGAATAAATAGAGTTAGAAAATTATTAAGAATGTATTTAACGTGGACTCAAAATTCCGTTTTTGAAGGAAAGATAACAGAGTCTAAGCTTCAAAAATGTTTAAACGAAGTTAATAGCCTTATCGATAGAAAAGAAGATTCTATTTATGTATATAGAGTTCAAAATGAAAAAAATATAAAGAAAGACGTTATTGGAGAAGAAAAGAATTTTGATGAATTATTTATTTGATAGTATAATAAAAATATGAGATTTGCAGTAAACCGTAAAAATGATTAGATTGAGCAGAAGCCTTTAAAAATCAAGGATAGAGGTATGTTGTATACAAATTAAAAAAATAAGACTGAAGGTTTACTGCATTTGCTGGGATTATTTTTAGAAAAAATAGTCTATAAATGGCTTAAAATGGTCAAAAAGAGCTTATTAATTTTGGG # Right flank : CAATGAGAAAATACTGATATTAAATTTTTATTTAGTATCAGTATTTTTGTTGTTTCAAATTGGGATAAAAAAATAAATGTTCAAAATATAGTCAATTAAATTGTAGATAATGGTATAATTATTTACAAAAACATAGAAAGAATAGATTTTTATATGTAAAATTTTATTTTAAAATAAAATTTATAATAATTATATCCTAAATAGGTCCACAATTATAATTATAATATATTTATAGAAAAAGAAGAGGAGGAGAGAGATGAGATTTAAAGTAGTTTTTAAAAGTAAAAACAAAAAACTTCCTATAGGATATAGGACTTTATTTTCAAGTATGTTTAAAAGCATATTAGAAAAAAGTGATGAAGAATATTTTAAAGAAGTTTATTTTTATGAAGAAAAAAAGAATAAAAAAATTAAAAACTTAAATTTTTCAGTTTATCTTCAAAACTTTAAAATTGGAAGTAATGAGATTGAAGTTGATGGGGATATAATTTTAAATATAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2331404-2332022 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006905.1 Clostridium baratii str. Sullivan chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 2331404 29 100.0 37 ............................. TTACCATAAACGTAATTAATACTAATAATGCAATATC 2331470 29 100.0 36 ............................. TTATAACAGATAATCCAATTTTACTAATTGGTGTAT 2331535 29 100.0 36 ............................. TTATAACAGATAATCCAATTTTACTAATTGGTGTAT 2331600 29 100.0 36 ............................. TAGCTTAAAGCAAAATAGATTAAATCAAATCTTTGA 2331665 29 100.0 37 ............................. ATGATTAGATAGCACGTCCTAATCACAAAAGGAATTT 2331731 29 100.0 37 ............................. AAAGTAAAATCTGATTTCATACTATCCATAGTGAAAG 2331797 29 100.0 37 ............................. TAAGGAGTAACACTCCCTATATAATTACCTTCTTTAA 2331863 29 100.0 36 ............................. AAGAAAGTTGCTTTTTCAAATATATCTGCAAAATTA 2331928 29 100.0 37 ............................. AAAAGAGCTTGCATAAATGTAGCTACTGCTCTAACTG 2331994 29 82.8 0 .......A...........TG.G.....A | ========== ====== ====== ====== ============================= ===================================== ================== 10 29 98.3 37 GTTTTATCTTAACTATGAGGAATGTAAAT # Left flank : ACTTTAAAAGACAGTTTGAAAAATGAAATAGATTATTCAAAAAGAATAAAATTAAAGGATGAACTAATGCAATATACGTTATCTATAAGTAAAAAGGAGTTTGAAGGAAAAATAAGAAAAGGAGCGAAATATGATGATTTCAAAGTAAATGATTATGAATCATTTATTATATCATATTTTGATTATTCATTTGAAAAGGGTTTAGAAACGGATAAATTTAAAAATGGAAATGAATTTACGGATAATCAATTTTTATAATTAGTATAAACTTGGTAGATTAAATGATAAATTAATGATAATATTATAATAATATATTAATTTGCAGTGAATCTAAAAATAATAAGAATCTAGCTAAAGCTAGCAAAATCAATAAGTGAGCAACATTTTTGCTTGGTAGGGAAATTTAATACCAATGGTTTACTGCAAAAGAGATTAGAATAAATGAAAAATGATATTTGCAAATGGCTTGAAATGGTTAAAAATACTTGCCTATTTTTGGG # Right flank : AATTTAAGATGATGTTGATTATAAATCAGTCACGCAAAAAAATTACCTTAATTATATTAATGTTAATAAATTATAGTATTGGAAGATGGAAAAGTAGGAAGTAAATAGCACTTCCTTTTTCTATATGCTAAAATATGTATATAAAAAAGAAAAGGAGAAAATCCATGAGTTGTATATTTTGTGAATACAGTAAAGAAGAATACATAGCAGAAAATGATTTATGTTTTGCTATTTTTGATAAATTTCCTGTTAATGAAGGACACACTCTTATTATTCCTAAGAGACATTTCCAAAATTATTTTGATGCAACCAAAGAAGAGATTGCAGCGATGTATGATTTATCTCACGAGGTTAAGAAAATTATTGATGATAAGTATAGTCCAGACGGATACAATGTTGGAGTTAATGTTAATCATGAAGGAGGTCAAACTATTATGCACCTTCATATGCACATTATTCCAAGATACAAAGGTGACATAGAAGATCCTAGAGGTGGCATT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //