Array 1 19395-19871 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCA01000013.1 Methanolobus vulcani strain PL 12/M, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 19395 37 100.0 36 ..................................... CTGCTTGTGTTCCGGTCAGTGACATTGCATATGCAT 19468 37 100.0 36 ..................................... AAAATGACTACAACAACAGACGTAAAGACAACAGGT 19541 37 100.0 35 ..................................... ATGGCAGCTACTACTATGAAAATTGAAGGCTATGG 19613 37 100.0 39 ..................................... TAATGGTAGCGGTATCCCTTACGGTACTATTCGTTTATG 19689 37 100.0 37 ..................................... GGCTCTTCCCTGGCTGCGTCTATGATGTGTTCCATCT 19763 37 100.0 35 ..................................... TGTCGTCAAACACAATAGTCACATTCTTAGCAGTT 19835 37 91.9 0 ..................T..T..............A | ========== ====== ====== ====== ===================================== ======================================= ================== 7 37 98.8 36 ATTCAAAATCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTGTCAC # Right flank : ACTGAAAACGTCGTCAATAGAAAGAAGCAAATATAGAGCTTATAGACAATTGTAATATACCAACGCAAGAAGAGGTGAGAAAATATGTTTGCTAATATGCAAAGGAGATTTTCAGTTCGACCTTGAAATCTCCCTTGCAGAAATCGTGGCAGCCATTTTGGCTGTCCTTTTTCTAATCTGTAGATTGTTTTTCAGCCATAAAAGCCTTTTGAGTTGCACTTTTCCAGGTGATATTATGACAAGACCAACATGTCCAAGATGTAAACAAAAAATGGTATCTGCATATATTCAGCAACGTAAATCAGGGAATTTGAAAGAGAAATGATGCGGGAGGTGCGATTCGAACGCACGAACTCCTACGAGAATGGGTCCTAAGCCCATCGCCTTTGGCCAAGCTGGGCAACCCCCGCAAAAAGAAGTAATTGGTAAATATGCCCTTCACATATTAATATTGCGGAGTGATATTTTTGCACTTTTCCCTGGACATTAGACATTCCAGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAAATCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 354600-353229 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNCA01000001.1 Methanolobus vulcani strain PL 12/M, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 354599 29 100.0 32 ............................. TCATAACACACAACAACAGATCATCACCAAAC 354538 29 100.0 32 ............................. AATGTGCCAGGTATCAAAAGTCAAGTATCAGA 354477 29 100.0 32 ............................. TACTATTCTCTTATGAGTTCATCACCGTAAAA 354416 29 100.0 32 ............................. CCTGTTCGGGTGACAGATGAAACCGTGACTGC 354355 29 100.0 32 ............................. AACTTCATAAATGAAATTAACCTTGATTCCGA 354294 29 100.0 32 ............................. TATTTTCAGGATAGGCTCTTACCTATTCCTCC 354233 29 96.6 32 ............................A TAAAATATCTGGCAAATGGGATATGTTCTACC 354172 29 100.0 32 ............................. GTTCAAGGATGCTGTCTTGATCAAAGTAATAC 354111 29 100.0 32 ............................. CGTAGGTCTGGACGAATTACATGCTTTTTTTG 354050 29 100.0 32 ............................. TGGCTACAAACTACGAAATTCCATATATCACA 353989 29 100.0 32 ............................. ATTTGGCTATTTCCCGTATGATCCTAAAAACA 353928 29 100.0 32 ............................. ACCGTTTCACGCCCTCAGAGCGACCTGTATAA 353867 29 100.0 32 ............................. GAACTATTCAAGATTGGGCGACCTCAGAGGCA 353806 29 100.0 32 ............................. AGTTTGGCGACTCTGGGACAAATTACTCTATA 353745 29 100.0 32 ............................. ACATTTTAATTTTAATAGGGGTCGGCATACTG 353684 29 100.0 32 ............................. CACAACTAATAAATTACAATAATAATAATAAA 353623 29 100.0 32 ............................. ACATCTTTCAGCGGCTCTATTATCGCGAAACA 353562 29 100.0 32 ............................. TGATAGCGTGTTATATTGTATTTGCGGCTCTG 353501 29 100.0 32 ............................. TTATTACAGTACCGGACGCCTTATTTGCTCTG 353440 29 100.0 32 ............................. TTCACAGTTGCAAATATTGACGTAGATCCAAC 353379 29 100.0 32 ............................. TACCTTCTTCAATTGACTCAAGACATTCCCGC 353318 29 100.0 32 ............................. TCATCTGAAGAAGTATATTGCAACCTATGCGA 353257 29 86.2 0 ..............T........A..T.A | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.3 32 GAGTTCCCCACACACGTGGGGATGAACCG # Left flank : TTTCGGCAGGTGGAATTGATATCCCGGATACACCTAAGGATCAATGGCCACCGGCAATTCCAAATGAAAGGAGTATTGGCGATGTTGGTCATCGTGCTTGAGAATGCACCCGACAGGCTGCGTGGACGTCTGGCCTTATGGTTATTAGAGGTTCGTGCAGGTGTTTATGTTGGTGATTATTCAGTAAAGGTAAGAGACATGATTATTGAGAACATCGAAGCAGGTCTTGAAGATGGAAATGCGGTCATTGTCTGGAACTATCCTAATGAAGCAGGTTATGATTTTATTACAATGGGCGAAAACCGCCGTATTCCGAAGGAAATGGATGGGGTTAAGTTAATATCTTTTTTACCTGATACTAAATGATTAGGTGTTTTATGTTCATGATTTTTACTGATACAGATGTCAAACATGTGGATGTTTCACTCAAATCCCATAAAACCTTGATAATAAAAGAAGACGGAAGCCTATTTCTTTATTGATTACATAAATGATGCACA # Right flank : AAAACAGTATAGTTTATAATCTATGTTTAAAAGAACGGACTAATTTCCTCCTCTCAAAAAAATCATATACTAACCGCACCCTAAAATTATTAATAAATGTCAGACGAGAAAGGAACAGATGTATCCATATACCCTCTTCTCATGGTGAACTTTATCGGGACCATGGGAATAAGTCTAGTTCTTCCTTTCCTGATTTTTCTAGTAGAGAGATTTGGCGGCAATGCTCTTGTTTATGGGCTTCTCTCCTCAATGTACCCTTTTTTCCAGTTAATAGGTTCACCTCTTCTTGGAAAATGGTCTGATATCTACGGCAGGAAAAAGATCCTGTTCGTCAGCCAGGCCGGAACTCTGCTGTCATGGATATTGTTCTTTATAGCGCTCTTTGTACCTGTAACAATTTTGACCAATATAGACTCAGGTCTTCTTGGTAAATTCATGATCACTATTCCCTTGTTAATGCTCTTCTTTGCAAGAGGTCTGGATGGTCTGACCGGTGGCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCACACACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTTTCCCCACACACGTGGGGTTGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //