Array 1 154093-152284 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOHH010000002.1 Bacteroides sp. MSK.18.91 NODE_2_length_271658_cov_126.098, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 154092 47 89.4 28 A.........A....T.........A..............A...... AGAAATTAAAAAAAAGTCAGCCAGCAGA 154017 47 100.0 30 ............................................... ACGAACATGTAACACATTTGGAAGATTAGA 153940 47 100.0 29 ............................................... ATAAAATTAGGGTCATAACACATTGACGT 153864 47 100.0 29 ............................................... ATTACAAAAAAGTACATCTTCACAAAACA 153788 47 100.0 29 ............................................... CGATGTGGTTATGTACGAGGCGGCAGCGC 153712 47 100.0 29 ............................................... ATTCTAAGGTGGTTATAAATTCGCATGCA 153636 47 100.0 29 ............................................... CGACCATTGCTGGGCTTTCTTTTCATTGC 153560 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 153483 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 153406 47 100.0 30 ............................................... TTTACTACAATAACCCTTGACGCAATCCGG 153329 47 100.0 30 ............................................... GATTGTCATATAATTTTCTTAGTCCATCCG 153252 47 100.0 30 ............................................... AGTATACTCGCTTACCCCTGAAAACTTTAT 153175 47 100.0 30 ............................................... CATTTGCGTTAACACAGTATTAGCCTTATT 153098 47 100.0 30 ............................................... CTAATTTACAGGAACGAGTAAGAGAATATA 153021 47 100.0 29 ............................................... TACATTAATCCCGCCTACATCTAAGCGGT 152945 47 100.0 30 ............................................... ACATATGGCTGTAAAATTTCCAGATAGGCT 152868 47 100.0 30 ............................................... CGCGTATTCGATAACTGGGATCGCGAGAAC 152791 47 100.0 30 ............................................... CACCTTCCTCTAAAGCGCCTGCACTTTCCT 152714 47 100.0 30 ............................................... TAAGGAAGTTGTATACTTTTTGTGATAGGT 152637 47 100.0 30 ............................................... CACAGCGGGATAACCCCGCTGTCTTTTAAA 152560 47 100.0 30 ............................................... TAGTCTTCCCACATAGAACGAAGAGTTACC 152483 47 100.0 30 ............................................... TAAATCTCAATTCTTTTCTAGACCAGTAGT 152406 47 100.0 29 ............................................... ACAAACCATAATACGACAAGGAAGCTTTT 152330 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 24 47 99.6 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAGATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : ACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGGAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //