Array 1 694253-694647 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG700733.1 Limosilactobacillus antri DSM 16041 SCAFFOLD2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 694253 29 100.0 32 ............................. TTATCGGCCCCCGGGCCACCATCGCCACCAGT 694314 29 100.0 32 ............................. GGCTTCTAGTTCATTTTGTGAGAACTTCATCG 694375 29 96.6 33 .................A........... ATGTAACTAGTCTTGCCCTTGCTTTAATTCTTC 694437 29 93.1 32 .............A.G............. TTACCAACTGCTGGTTGGTCACCCCGCTTGAT 694498 29 89.7 32 .............A.G............C GAACCTTCACCACAAGGGAAAGGCCATCCCCA 694559 29 96.6 32 ............................C TTCAAAGAGCTTCTTTTAGACGGCAAAGTCGT 694620 28 79.3 0 ............CAC........-...AA | ========== ====== ====== ====== ============================= ================================= ================== 7 29 93.6 32 GTATTCCCCATGTGTATGGGGGTGATCCT # Left flank : GATTTAACGTTATTCGACTTAAAAGAGTACTTTGCTGGCGAAAAAACATTGCTATCTCCAGCGTATGAAAAAGAGCTGACTGGCCTATGGTTATCGCAATTTCAGCATAGTTTTCCGGCATTTATCGATCGCTTTCAGCTTAATTGTTTTGTCGATGAAGAATATAACGTTTTAGACATTACCAGCAAGCAAACGAAAATCATTGAAAGAATTCCTGATAGGAAAACGCTAGCGGCTTCGGTACCAGTCTATATGGATTCATTGATGTCTCTAATTCGACGGGGATATTTTAATTAAGAGGAAATCCCAAAGGGCACTTGAGTGATAACTTAGTTCGAATTAGTGTGCAGTGGTTTAAATATCTTTCACATTTAATTACAAAAATGGGCGAAATAAAACTTCATAGAAATTAATCAAGAAGCGGTATGCTAGATCAGCAAACTAAATAAAGATTGAGGTATACTTAGATCAAAAGCTTGATTTGTTAGGGATCTTTTAGT # Right flank : AATAATAAAACTTCTAGTGCCTGCCTTCACATTGCATTTAGGTTTGGTCCTTGCTAAAATTACTGTGAAACGTTTTCATGGGGGAGTTATAAAATGGGCAAGCTGTCAAAACAGGCACTTTCATTATGGGCAAAGAAGGAAAATCGGGAGGGCCAGGAACTCTGGCTGCCACTAGTTGCGCACTTGGTTGATACTAAAAATGTTATCAACTGGTTATACACCCATTGGTTAAATGACAGCCAACGACAGGTTTTACAGCAAGATCTGACGACGTCTGAAATTGAACAACTGGTTAACTTTGTCGGTTATTTTCATGATATTGGCAAGGCCACGCCGGCTTTTCAAACTAAGCCTTCCTATAATCGTGATTATGAACTGGACGATCAGCTGATAGAGCAGCTCCTGCGAAGCGGTTTTGAAAAACTTGCGGAATATGAACCGGCCTTCAGAAGTAAATCCCCTCACGCATTAGCTGGCGAGACCATCTTAGAAACATCAGG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTGTATGGGGGTGATCCT # Alternate repeat : GTATTCCCCATGTATGTGGGGGTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 704055-704519 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG700733.1 Limosilactobacillus antri DSM 16041 SCAFFOLD2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================================================================================== ================== 704055 29 96.6 32 ............................C TGACTTGAATTTTTCATGCTCCTTCTCCAATT 704116 29 100.0 32 ............................. CGCCAGTAGTGCCCACACTCCTGCTCAACCCA 704177 29 100.0 32 ............................. TCATCAATCTTCATCTTCGTTACCTCCTAAAG 704238 29 100.0 32 ............................. GACTTGCTCAGTACCTGACGTTCGAACATAAG 704299 29 96.6 101 ............................C CGAAAAAGCGCCGTGAGATCATTCCTCATCAATATGGAGACTCCCGCTATTAGATCGCATTCTGCGTCTACTATGGTATATAATATAACCATTAATTTCTG 704429 29 79.3 32 ..........AAGCCA............. GAAACGATATTCGGCAAAGCGAATATCTAACT 704490 29 82.8 0 ...........C...A........T.TA. | A [704513] ========== ====== ====== ====== ============================= ===================================================================================================== ================== 7 29 93.6 44 GTATTCCCCATGTATGTGGGGGTGATCCT # Left flank : ACTGCGCAAATTATTTCAATTGGCGCGGTGAAACGAATTGCTGGGCATACAACAACATTTTATCGTCTCGTGAAACTGCAATCGGGTAAAAAGTTGGCAGGTGACATTGCGCGGCTGACCGGATTAAATAGCCAGCAACTAGCTACGGAAGGTGTAGCAGTGAAGGAAGCGCTGATTGATTTACAAAGTTTTGCGAAAAAACTGCCAATCGTTGGTTACAATTTATTGTTTGATGAACGTTTTTTACAAACTGCGGTGATTAGGGCAGGGATTGTTCAATTTAATAATAAGATGGTGGATGTATTACCGTATGTTAAAACGGTCGATAAGTTTTGCGATAATTATCATTTAGCGACTATCTTAACTAGGTATGGTATTAAAAATGAGCAGGCACATAATTCGTTGGCGGATGCAACCGCGACGATGAAACTAGTTGATAAACTCATTAAAATTCACGGCTTTCGGATATAAGAACCGCGGCAGATCAGGGATCTTTTAGT # Right flank : TAATTTGAAGTGTATCGATCCGCTTGGAAAAAGATTGTGGAACCTGTCATCAGGCTTCGGAATTTGCTGAGGCTCCGTCTAGTATTGAGGGGCTCCCCAACATTTTTTAGAATTACCGTAAAGAGGATTGGAGAGTTATGGGAAAAAGAAAACGACAAACGATAAAGCTTTCTGAAAACACCCATTTTTCTGATGAGTTTGAGCAAATGCTAGTGGAGTCGGGTATTATCCATTCTAAGGGAGCAAATGCGACTGACCGGATCGGGCAGGATTCTGATAAGTTAATTATTTCTAAATCCGGACGGGAACCGCAGACACTTGATGAGCTTCGCCAGCTGTTGAATTCTGGTAAAAGGTTGTTATCCTTGGATTTTGAATTTTACAATGATCCTAAAGGAACCCCGTGGATTCGTGAGATTGCTGGCAAGCAGTTCGGCTCCCCAACCTATTTTCAGTACCGGCTGTTCAACAAAGAAATGACCCCAGAGCGCCAGCTTGAG # Questionable array : NO Score: 4.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:-1.05, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //