Array 1 13-321 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB899854.1 Cohnella laeviribosi DSM 21336 F560DRAFT_scaffold00047.47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 13 32 100.0 38 ................................ ATGAGCATGCGATCACCTCGTTATCTGGTATGCACTTA 83 32 100.0 35 ................................ CAAAAGGGAACGAGGTAGGCGTGGCCGATAAGGTT 150 32 100.0 38 ................................ GGTTGTGGAGAGGGCTTTATTCGCACGATGATAGTACC 220 32 100.0 37 ................................ CTCCGAACTGGCCCGCAATAACAGCGGTGACTATGGA 289 32 100.0 0 ................................ | G [316] ========== ====== ====== ====== ================================ ====================================== ================== 5 32 100.0 37 GTCGCATCCCGCAGGGATGCGTGGATTGAAAT # Left flank : TCTCGAACCAACG # Right flank : TACCACTATCCTTCCAAAAGGCGGTGCCGCTTATGGACAAACCTGCAACGTTCAGCATTGTCGGCGGCGGCGGATTTCGCGCGCAATATTTTCTGCGGATCGCGCAGGCGCTTCCCGAGCAATTTCGGGTGAGCGGCATGGTGGTCAGGGATGAGTCGAAAGGCCAGGAGATGGAAAGCCGGTGGGGCGTTGCTACTTACCGGACGCTGGACGAGCTTCTGGCCCGCGAGCGGCCGGACTTCGTCGTCCTGTCCGTTCCCCCGTCCTCCGCCATGAATTATATGCTGGAGCTGGCGGAGCGGGGTATGCCCGTCCTGACGGAAACGCCGCCCGCTCCCGATCTGGACGGGCTGCTGCGGCTGCACGACCTTCTGACCCGAAAGGGCGCACGGATTCAAGTCGCCGAACAGTACCCGTTGCACCCTTTGCAACAGGCGCGCGAGGCCGTGATCCGGTCGGGAATGCTTGGCATCGTGAACCAGGTCACCGTTTCGATCTCG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCAGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [10.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 852-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB899868.1 Cohnella laeviribosi DSM 21336 F560DRAFT_scaffold00061.61, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 851 32 100.0 37 ................................ CTCCAACATCTTCCTGCGCTTGTTGATCAGTCTGGTT 782 32 100.0 35 ................................ CGACAAGGACTCGCAGCGGCTTACGGAGACATGGC 715 32 100.0 39 ................................ TCCATTGGCACATTCGTTCAATGACGAAGGTGAGGACAA 644 32 100.0 34 ................................ CCGAGACCGTCAGCCTTTCCGCCGTTGCATCCGA 578 32 100.0 35 ................................ CCCTATACATTTGTGTTGAGTAGACCTATAATCGT 511 32 100.0 36 ................................ TTACCTTATCTTGCGTGGGTCCAACACTATCCATCC 443 32 100.0 34 ................................ AGTATCTGATTTATTATCAGGACAAGCTTTATGC 377 32 100.0 37 ................................ TTGTCTCAAAAAATGCCGTCTCTGCCATCGGACAAAT 308 32 100.0 38 ................................ CGGATTGCCCTTTGCAGTATAGGCTTGATCGACCTATA 238 32 100.0 34 ................................ GCCGTTCTGGCTCATCGATGTTTTTGATGGCGAT 172 32 100.0 33 ................................ ATCCACGACAAACAGCATATAGTCCTCATGGAA 107 32 100.0 38 ................................ CGCACCATGAGTTATGGCGAAATGACGATTGCGGCATT 37 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 13 32 100.0 36 GTCGCATCCCGCAGGGATGCGTGGATTGAAAT # Left flank : CCGCCATTCTTATGGAAGTAGGTGAATGAGTGCTGGTATTGATCACCTATGACGTGAGTACAGTGAATTCTGCTGGACAAAGAAGGCTCCGGCAGGTTGCCAAGGCATGTCAGGCCTACGGACAACGCGTTCAAAATTCCGTGTTCGAATGTGTAGTCGACGCCACGCAATTTAAGCTCTTGAAATTAAAACTCCTGGAGATCATCGACCCGGAACAGGATAGCCTTCGAATTTATCAGTTGGGGAAAAACTACAAGGGCAAGGTAGAACATATTGGAATAAAAGCATCCATTGACCTGGAAGGTCCTTTGATTATGTAGTGAAGGTTGTGGTGCGAATGGGGAGTGAACATAAATTTCCGGGGACATTCGCACCAAGAATTTGGATCAAAAACCCATTTTATTACTTTTTATGGATGTTGATTTTGGGTTTTTGTTGTTTTTTTTGTGTGATATGATTGTAATAAGTTGATTTTATGTCCGTTTGGACTAGAAATCGCT # Right flank : TGGCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCAGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.10,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //