Array 1 139327-137255 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJD010000008.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P5-01 seq_tig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 139326 28 100.0 32 ............................ CTGCTTGACGCTCTGCACATCCTGGTCAATCT 139266 28 100.0 32 ............................ GTGTCCTGGACATCATCGCCACGATGACAAAC 139206 28 100.0 33 ............................ CACCAAATCCCGTATTAATTCCACATAATCTAT 139145 28 100.0 32 ............................ TGAAACAGTATCGCGTATGTCATAACCCGTAT 139085 28 100.0 32 ............................ TGCTGGCGCAGACAACTGCGGAATTAAATAAT 139025 28 100.0 32 ............................ TCTCTGATTTCACCGCTCAAAGTGAAAAAGCA 138965 28 100.0 32 ............................ GTGGCGGCTTCCGAATTTAACGGGGTCTTAAC 138905 28 100.0 32 ............................ TTGCCTCTGCTAATGCTGTTCGTGCTAATTAT 138845 28 100.0 32 ............................ GGCATCAGCAATTACGCCATGGTAGTCATCAG 138785 28 100.0 32 ............................ TTGCTCAACCAGATTAAGGGCGAGCTGGCTGG 138725 28 100.0 33 ............................ TTCATCCAACAGGCGCAGGATAAGCTCAACCAG 138664 28 100.0 32 ............................ GCCAGCGGTCGGATAATTGAGCTGGCCAGACT 138604 28 100.0 32 ............................ AACCAGAACCAATACCACCAAGATCCACCAGT 138544 28 100.0 32 ............................ AACCAGAACCAATACCACCAAGATCCACCAGT 138484 28 100.0 32 ............................ AGTTCCACCTCCGTAACAGCTGATGAATTGAT 138424 28 100.0 33 ............................ ACAAAGAAGGGGTGTTGTGCTGGAAGCGATCAA 138363 28 100.0 32 ............................ GCGTGGCCATCCACGGATCATTCAAAGAGAAC 138303 28 100.0 32 ............................ TCAGGCATATTACAAATATGCACTCTATCTAT 138243 28 100.0 32 ............................ ATTAGAATATTTCAAACGAGGGAATTTCCCCG 138183 28 100.0 32 ............................ GCCTCCAGCTCCGTGACGTTGTGCTCACGCAT 138123 28 100.0 32 ............................ GTCATCAGGGCGTTCGCTGTGTCCTGCAATGC 138063 28 100.0 32 ............................ GAAATAGGGTCGGCCACGGCGGCCTGTCGCGC 138003 28 100.0 32 ............................ CGGAAGTTGATCAGTATCTTGCAAGCGTGGGT 137943 28 100.0 32 ............................ CACGCTATCGAGGCGATCCATGGGTACCGGTC 137883 28 100.0 32 ............................ AGCTTGTGGCGCAGCATTACCCACAATATGCC 137823 28 100.0 32 ............................ TGGGTAACTCCTCCGAAGCAGGGATCCGCCAG 137763 28 100.0 32 ............................ ATCTTGATCAATGCCTCAGTAAAAACTACTGT 137703 28 100.0 32 ............................ CAAACTCCGCAATTTGTTTTTCTGTCAATGGG 137643 28 100.0 33 ............................ ATAACATTAAGAGATGTTCCGGCAGCAGTACCG 137582 28 100.0 32 ............................ ACCAGCCGCGCTTCACCAGCATCGGCTCCAGC 137522 28 100.0 32 ............................ GTACTCGATACCCTCAAAACCGAATTTAAGCT 137462 28 96.4 32 ....T....................... GTATTCGATACCCTCAAAACCGAATTTAAGCT 137402 28 96.4 32 ....T....................... GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 137342 28 85.7 31 A..........C...C......C..... ATAGAAAATAAGGCCTAACAGTCCTCGGACC C [137317] 137282 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 35 28 98.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCATGGTGGATGGAATCGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAAGGTGTTTTGACCCTAATTTTTGGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTTAGAGAGGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGGGATATTATTTCA # Right flank : CTGGAACGAACGGCTAATTAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 149875-148823 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJD010000008.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P5-01 seq_tig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 149874 28 100.0 32 ............................ TACCGTATCAAGCACCAGCGCACCGTCGGCAT 149814 28 100.0 32 ............................ TGAATATTGTTCACGCGCGTCCTGATGCCGCT 149754 28 100.0 32 ............................ GATAAATCTGCTGAACAATTCGGGGTTCACGC 149694 28 100.0 32 ............................ TCGTTAAGCAGCTGCATGGCGTTCGGCATGTC 149634 28 100.0 32 ............................ GAAAAACTTCCAGCCTGAGAACGTCTACAACA 149574 28 100.0 32 ............................ GAGCAGAAGCTACGCGCTAAAGCCCTTGCGCA 149514 28 100.0 32 ............................ ATTGTCGCAGGCTTTTCTTTTGAGTCGGCTGC 149454 28 100.0 32 ............................ AGACTACGGATGCGCCAAAGAAATCCGAAGAC 149394 28 100.0 32 ............................ GTCACTCCCCGAACTGATTACACAAATCCGCA 149334 28 100.0 33 ............................ AGGGAACTGGCGTAAACGTCCAGACGTCGGTGT 149273 28 96.4 32 ..G......................... GTCTGGGTTCGCGCCTGACCGCCGTAGCTAAG 149213 28 100.0 33 ............................ GACAATTTTGCGACTGTAGACGTCCTGCCAGAA 149152 28 100.0 32 ............................ TTAACTATTGCACTCTGCAGCTGCGTCTGTTG 149092 28 100.0 34 ............................ GCCGCACGAAAGCGAAGCTGGCCAGCCTGCAAAA 149030 28 96.4 32 ...............T............ TGGCGCCTCCGTGCCGGTGGCGCTCCGCGCTT 148970 28 100.0 32 ............................ CGCACTTATGGCGAGTGGTAAAGATTGAAAGG 148910 28 89.3 32 .........T.....A....G....... AATGAGCAACATCGACAAACAGGCGCTACACA 148850 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================== ================== 18 28 97.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACTCCCACAAACGCAGCCCGTATGTCGTTGCCTCGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAGGACGAATCGGAACCACCGCAACAAAAGGAATGGCTGCTGGAAGATACAAAAACAAAGTGTGACTACTGTCGGGCGTTAAACCATGTACTAATGGTGTCGCAGTTTGACCGCGATATGCTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCGCCTCAACGTGCAGAAACGATAGTTCACATTATTTCCTGAATGTAATTCGTAGTGTCGGGGAAAGACTACTGACGCCACTGGCTTGACCTTTTTTTGATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTTCCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCTTTCA # Right flank : AAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTCCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCCAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCACGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAACGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACACAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 165185-164736 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAJD010000008.1 Enterobacter roggenkampii strain Res13-Abat-PEA24-P5-01 seq_tig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 165184 28 100.0 32 ............................ ATGTTGTTTTGTGCCGTCTGCCCGAACGTGTT 165124 28 100.0 32 ............................ TTACAACGTGATCGCATGGCGCAGAGTGACCG 165064 28 100.0 33 ............................ TAAACATGCGGCCATCGTCGTCAGCGCGCTTTA 165003 28 100.0 32 ............................ AGTCCATCCCGCACAACCCACCGCGCCACGTT 164943 28 100.0 32 ............................ CCGACGCAGCAACGCCTGGAACCCTGGCTGAG 164883 28 100.0 32 ............................ GGTCGCTGGAAGACACAACCTGTTCAGCTGGC 164823 28 100.0 32 ............................ TTAAGAGGCGTATTGGCCACCCGGTCGCAGAG 164763 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGGTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAGCGTTTATTGTTTATGCAAGGACCAGATCGCCCTGCGGATGGCACGAGCATGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGCACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCGAGCGCTTTCACCTCTTTCTCGACGATATCCATGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //