Array 1 2359-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAM01000012.1 Epilithonimonas mollis strain DSM 18016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2358 47 100.0 30 ............................................... AAAAAAATAATTAATGTAAATCTAAATATA 2281 47 100.0 30 ............................................... TTATTTCAATATGATTATCACCTTGAAAAT 2204 47 100.0 30 ............................................... CGCTCTTGGGATTAGTTCAATTGAATTTGA 2127 47 100.0 30 ............................................... AGCAACCAACCCTCCAGAGTGAAGTCTTTT 2050 47 100.0 30 ............................................... ATCTCGATATTACTTCCTCTTTTGTTTTGT 1973 47 100.0 30 ............................................... TGAACGAAAATTTCTTGAATAGAGTTCAAA 1896 47 100.0 30 ............................................... AGTGATTTTACTTGTATTATAACCAAAGGC 1819 47 100.0 30 ............................................... ACGTTTTTATGGGCTACTAACCCCCTTATG 1742 47 100.0 30 ............................................... TCAGTCATAACAGGTCGCATTTCGTCATTA 1665 47 100.0 30 ............................................... TATTGAGAAATCCAAATCTATGCTCCACAT 1588 47 100.0 30 ............................................... ACATTGCAATGAATGGTAAGAAAGTAGAGC 1511 47 100.0 30 ............................................... TGTAAAAATCTTCTTAATGAAGTCGGAGTA 1434 47 100.0 30 ............................................... TCGAAGTTTCTCAACAAATCAGAACCGCAG 1357 47 100.0 30 ............................................... ATACCAAAAAAAAGAAGGCGTTAAGACAAT 1280 47 100.0 30 ............................................... TACACAGCGACAGGAATTGGTGAAACACCT 1203 47 100.0 30 ............................................... TTTTCGTTTAAATCGTTATTATCAAGATTT 1126 47 100.0 30 ............................................... AAACCTGACTGCGAGATAATCGGAATACTA 1049 47 100.0 30 ............................................... CTAAATGTTTTATATTTGTATCAACAAAAC 972 47 100.0 30 ............................................... TTCCTACTTCAAGGATTCATCCAGAAATTT 895 47 100.0 30 ............................................... CATCTTTTTTAAGCACCAATTTGATTTTGT 818 47 100.0 30 ............................................... TAAAATCATTTGCTAAAACAAAAGAGCATC 741 47 100.0 30 ............................................... GAGTCAAATCCAGATCCAGTTCCAACGAAT 664 47 100.0 30 ............................................... ACATTGCAATGAATGGTAAGAAAGTAGAGC 587 47 100.0 30 ............................................... AACTAAGCTTATTTTCACGATAAAGGAAGT 510 47 100.0 30 ............................................... ATGATCTGCCTGCTGGTACAGTTGTATTTG 433 47 100.0 30 ............................................... AACCGAAAGATGTTTCTTCGCCTGACGGCG 356 47 100.0 30 ............................................... AAGTCTGCTTTGCTGATAGTTTCGCCATTG 279 47 100.0 30 ............................................... CGGTAGATATGCGCGTAAAGCGTAAAGTCG 202 47 100.0 30 ............................................... ACTTCCTTGGTTATCGTCGTAGTTTTTGGG 125 47 100.0 30 ............................................... CCAAGCAATTAGCGTATAAATCGTTTTCGT 48 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 31 47 100.0 30 GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC # Left flank : | # Right flank : CC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 142661-149252 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAM01000003.1 Epilithonimonas mollis strain DSM 18016, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 142661 47 100.0 30 ............................................... ACTCAATCCAAAGTCTGCAGCTTCCGAAGC 142738 47 100.0 30 ............................................... AATCAGTTGCTTTCATTTCTTCCCAACTTT 142815 47 100.0 30 ............................................... ACACCGATCACGTCAAAGATCCTTCAAAAC 142892 47 100.0 30 ............................................... TAATAGGCTTCTCATCTCATCCCTTTGCTT 142969 47 100.0 30 ............................................... AATTTATTGTTCTTTATCGTGGCGATAACG 143046 47 100.0 30 ............................................... CAGTATTTGACCGGGAATACTATACTTTCA 143123 47 100.0 30 ............................................... AAAAATATTCAGTGTTATGATCTATCACAT 143200 47 100.0 30 ............................................... CAATGGATAGTTTGGGCATTATCAAATCAA 143277 47 100.0 30 ............................................... GCATTAATTAAAACAATAGCCCAGCCACCC 143354 47 100.0 30 ............................................... GTTGCATTGAATATCTGCAATAATGACTTT 143431 47 100.0 30 ............................................... GCCGTTGTACTATGGGATATGAAGCCAAAC 143508 47 100.0 30 ............................................... TAAGTCTTTTTTTTGTGCATTATCGAGAGA 143585 47 100.0 30 ............................................... TAAAGATTAAGCTTCCGGATATTGATTATA 143662 47 100.0 30 ............................................... TCCAATTGTCGTTTTTATCAAGAATAGGTC 143739 47 100.0 30 ............................................... CTCTCTTTTGATGTAAATCCACTCCAACTA 143816 47 100.0 30 ............................................... TCCAATTGTCGTTTTTATCAAGAATAGGTC 143893 47 100.0 30 ............................................... CTCTCTTTTGATGTAAATCCACTCCAACTA 143970 47 100.0 30 ............................................... ATATTTGACGAAGGAACTCATGCAGGAATT 144047 47 100.0 30 ............................................... ATAGTTTTTATGTCGTTGGTTGCAGCTTTA 144124 47 100.0 30 ............................................... GAATTAGAAATGCAATTTGTGTAATTATCT 144201 47 100.0 30 ............................................... AAGTTGGAAACATGGAATTACCTTCTATTT 144278 47 100.0 30 ............................................... TTGTAAATTTTCAATAAAAATTCATCCTCG 144355 47 100.0 30 ............................................... TCTGGCTGTTGGAATTGCTCAAATTGCCGG 144432 47 100.0 30 ............................................... ATAAAACCTACTTTTGCGTAACAATTAACC 144509 47 100.0 30 ............................................... TTACGTTAATGAGAGTTACGCCGATATTAA 144586 47 100.0 30 ............................................... TTTGCGTCCTCGCCTCGCTTCTTAGCCATA 144663 47 100.0 30 ............................................... GGTTTCAAATGCCAATTATAACTCATTAGT 144740 47 100.0 30 ............................................... TTGTACCACCTTTTAAGCAAATGACCCGCA 144817 47 100.0 30 ............................................... GCACCAATGGGTTCTATACTTGTTGTTGAA 144894 47 100.0 30 ............................................... TGTCGGATGGATCAGCTATATGATATATCT 144971 47 100.0 30 ............................................... TCAAAATTCGCAAATCTATGCCTCAATTGA 145048 47 100.0 30 ............................................... AGATTTTCACACATTAGCTCCACACGGACC 145125 47 100.0 30 ............................................... AAGATAGGCCACTACGTAACTACGCTAAGT 145202 47 100.0 30 ............................................... CCAATCTACAATGGTGAAGATACCAAATGG 145279 47 100.0 30 ............................................... TAGTCGATAGTGCTGGGAAAATTGCCACCA 145356 47 100.0 30 ............................................... GCATCCGTATCTTTCGCTATATTTGTAGTC 145433 47 100.0 30 ............................................... AGACAGATTTTTGTCCTCCAATTGTTTGAG 145510 47 100.0 30 ............................................... TAGAGGTTTAATCGTTTGTCCGCTTTCTGT 145587 47 100.0 30 ............................................... CCTGTTCTGATATCGGTTCTTGATTCATAT 145664 47 100.0 30 ............................................... GTATTCTTTACAAGAAAGTTTTCAGCAGAT 145741 47 100.0 30 ............................................... ATCCGTGATGTCCTTTAATTCGTTGCATTT 145818 47 100.0 30 ............................................... AAACTGTAAATAAAACATCACGCTAACCCT 145895 47 100.0 30 ............................................... ACAAAGAGTTCACTGATGTTGCTTTCGATA 145972 47 100.0 30 ............................................... GGCCTTTGATGCAGCTGTAAGAATCTGCGG 146049 47 100.0 30 ............................................... TTACTGTCTATAAGAGCCTGCGCCCAGCTT 146126 47 100.0 30 ............................................... GTATCTTCGTCAGGGTCAGCAATTGTAAGC 146203 47 100.0 30 ............................................... TAGTGATAAATCCGATGTACACCCACAGCC 146280 47 100.0 30 ............................................... ACGTCGGGCGGTTATTATTACACACCTCCA 146357 47 100.0 30 ............................................... TCCGTTACAATGTTAACTTTATCAGTTTTT 146434 47 100.0 30 ............................................... TAATTCTTTTATTTGAACCCTTGCATTTTC 146511 47 100.0 30 ............................................... TCATAATTTATCAGACGTACTGGAACGAAA 146588 47 100.0 30 ............................................... AGTGTGAATCCTGCAACTTCGACGAATAAA 146665 47 100.0 30 ............................................... CAATTTTGGGCGATAATCGGGTCTTTTGGT 146742 47 100.0 30 ............................................... GACTGGAGTTTGACGAATCGGGCAAAGTGA 146819 47 100.0 30 ............................................... AGCATACGATTAAAACCACGATCGAACTTG 146896 47 100.0 30 ............................................... AAAAAAATAATTAATGTAAATCTAAATATA 146973 47 100.0 30 ............................................... TTATTTCAATATGATTATCACCTTGAAAAT 147050 47 100.0 30 ............................................... CGCTCTTGGGATTAGTTCAATTGAATTTGA 147127 47 100.0 30 ............................................... AGCAACCAACCCTCCAGAGTGAAGTCTTTT 147204 47 100.0 30 ............................................... ATCTCGATATTACTTCCTCTTTTGTTTTGT 147281 47 100.0 30 ............................................... TGAACGAAAATTTCTTGAATAGAGTTCAAA 147358 47 100.0 30 ............................................... AGTGATTTTACTTGTATTATAACCAAAGGC 147435 47 100.0 30 ............................................... ACGTTTTTATGGGCTACTAACCCCCTTATG 147512 47 100.0 30 ............................................... TCAGTCATAACAGGTCGCATTTCGTCATTA 147589 47 100.0 30 ............................................... TATTGAGAAATCCAAATCTATGCTCCACAT 147666 47 100.0 30 ............................................... ACATTGCAATGAATGGTAAGAAAGTAGAGC 147743 47 100.0 30 ............................................... TGTAAAAATCTTCTTAATGAAGTCGGAGTA 147820 47 100.0 30 ............................................... TCGAAGTTTCTCAACAAATCAGAACCGCAG 147897 47 100.0 30 ............................................... ATACCAAAAAAAAGAAGGCGTTAAGACAAT 147974 47 100.0 30 ............................................... TACACAGCGACAGGAATTGGTGAAACACCT 148051 47 100.0 30 ............................................... TTTTCGTTTAAATCGTTATTATCAAGATTT 148128 47 100.0 30 ............................................... AAACCTGACTGCGAGATAATCGGAATACTA 148205 47 100.0 30 ............................................... CTAAATGTTTTATATTTGTATCAACAAAAC 148282 47 100.0 30 ............................................... TTCCTACTTCAAGGATTCATCCAGAAATTT 148359 47 100.0 30 ............................................... CATCTTTTTTAAGCACCAATTTGATTTTGT 148436 47 100.0 30 ............................................... TAAAATCATTTGCTAAAACAAAAGAGCATC 148513 47 100.0 30 ............................................... GAGTCAAATCCAGATCCAGTTCCAACGAAT 148590 47 100.0 30 ............................................... ACATTGCAATGAATGGTAAGAAAGTAGAGC 148667 47 100.0 30 ............................................... AACTAAGCTTATTTTCACGATAAAGGAAGT 148744 47 100.0 30 ............................................... ATGATCTGCCTGCTGGTACAGTTGTATTTG 148821 47 100.0 30 ............................................... AACCGAAAGATGTTTCTTCGCCTGACGGCG 148898 47 100.0 30 ............................................... AAGTCTGCTTTGCTGATAGTTTCGCCATTG 148975 47 100.0 30 ............................................... CGGTAGATATGCGCGTAAAGCGTAAAGTCG 149052 47 100.0 30 ............................................... ACTTCCTTGGTTATCGTCGTAGTTTTTGGG 149129 47 100.0 30 ............................................... CCAAGCAATTAGCGTATAAATCGTTTTCGT 149206 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 86 47 100.0 30 GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC # Left flank : CTTTAGCAGATGTTTTTTCAGTTAAATATATCGGAGCTGAGATCTACAACAACACAAAACTACGTAATAAAGGCAACCAACAGCTGTACTTCCCTGCCAGAACCTATTCCGGATCTCGGTACATGGGTGGCTACAGCGACCATTTCCCGATATTGCTTCACTTACATGATTCTCATAAATAAATATTTTTTTTGCTGTGAATGAAAAAAGGCACAGTATGTGATAGTATCACATCAATCACACTAAAAAATATTAAATTATGAGAAGTCTATTATGGTTAGTCGCAGCGATCTGTATCGTAGTTTGGCTATTAGGAATGCTGGGCGTAGTCCCGGGAATGAGCACCGGTTACCTGGTACATGTTTTATTGGTAATTGCCATTGTAGTGGTATTGTTTAACATCATATCCGGCAGAAAGCCTTTGGATTGATAACGACTACTTATCAGAAAAAATAATTTAGCCTGTTTTTTGAGCAGGCTGAATGTTTTATGGATTAACC # Right flank : CCTCAAAAGTTAATCCACTGAATTTCAGTGGATTTTTTGTTTATTTAGGATTTAAAAATCAAAACAATTCGAGCTGCTGGAATGTCGGAGACGGTTCTTCTTTATTCCTGGCAAAGAAAATTTCTATATCCCCGAATTGCTTATCCGTGATGCACATTATCGCAACTTTACCTGCTTTTGGAAGCATAAACTTCACTCTTTTGATATGGACCTCGGCATTCTCCCGGCTCGGGCAATGGCGAACGTACATCGAAAACTGAAACAAGGTAAACCCATCATCGATCAAGCTTTTACGAAAGCGGGTCGCATCTTTCATATTAGCTTTGGTCTCCGTCGGCAAGTCGTATAATACTAGAACCCACATAATCCGGTAAGCGTTAAACCTTTCAGCATTCATTTATTGTTGTATACTGTACAATTTAAAAAGTATAATGATTAATATAATTTCTTAACTCAATTCAGGATAAGAAATCATTCGTTTTTCCCCTGTATAACATTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //