Array 1 4275-5218 **** Predicted by CRISPRDetect 2.4 *** >NZ_NLPS01000002.1 Escherichia coli strain MOD1-EC5408 MOD1-EC5408_2_length_84202_cov_112.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4275 29 100.0 32 ............................. TACTAAAAGTCTGGTTCACGAATATCAAAAGG 4336 29 100.0 32 ............................. CCGTCGGCAGCGGCGTTAAATGGGGCGCGCTT 4397 29 100.0 32 ............................. TGATAAATTGTCCGCCCTGGCGGAATACCTCA 4458 29 100.0 32 ............................. ACGGCTTCATGTTCTTGGTGATGGGGTTCACC 4519 29 100.0 32 ............................. AGATCAACACGGTAGATATTTCCGTGATTGGG 4580 29 100.0 32 ............................. GCGTTGGAGTTCGCGGCGGCATTATTGAGCCT 4641 29 100.0 32 ............................. AGTCTTTAATCAAAATGGATTTTTATAATGAA 4702 29 100.0 32 ............................. GCCGGGTTAAGAAGGTGTATGGATGGCCCGGA 4763 29 100.0 32 ............................. GGTTACGCCTGCACAGAGTACAATGCGTGGGG 4824 29 100.0 32 ............................. CGGTGGCAGTGATGAGGCGTTCCCAATTAATG 4885 29 100.0 32 ............................. TACTGGAAAAAGCTGGCGACGGTGAGCGCAGC 4946 29 100.0 32 ............................. GGCACGGAATTGTTATGCTGTTCCCCTGACCG 5007 29 100.0 32 ............................. ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG 5068 29 100.0 32 ............................. ATCGGACGATGGCGATCGCAATCGCGCGGGAA 5129 29 100.0 32 ............................. TTTTTGTTCTCTTCAAAACGCCGAACAACCAA 5190 29 93.1 0 ............T.....A.......... | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.6 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //