Array 1 899327-898749 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINDM010000002.1 Phytobacter diazotrophicus strain NRB043 Scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 899326 29 100.0 32 ............................. CCCCCGGTAACGGCTGCGTTGTTCACTGCTGA 899265 29 100.0 32 ............................. TATGGAAGTTTCCATCCCTGTCTTCCCCCACA 899204 29 100.0 32 ............................. GATTAAATATGAAACAGGATGCTCACTTTGAA 899143 29 100.0 32 ............................. AAAAAAATTGTGTGGAGTGCTGGTGGCCGCCG 899082 29 100.0 32 ............................. AATATATGCGCAATCTGGAACGCGCGGCGATT 899021 29 100.0 32 ............................. CGTGTGCCTGTTTTTCGACATTGGCGTACAGC 898960 29 100.0 32 ............................. GATATGAGCGAAATCGGCTTCGGTGGAACCTC 898899 29 100.0 32 ............................. CGGCCTGAAATCAAATAGGGGGTATTATGGCA 898838 29 100.0 32 ............................. GGCGTCACCGGAGGCCGCAGCGCAAGCGAGCC 898777 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 GTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : GACATTCTCCAGCAGGCGCTGGAACGCGCCGATGAGATCAAACACCCGGTTGGACGTACCCGAGACATTGAGGCGCTTGATGAGCTTCTGACGCAACTGACCGATGACAAACACCGGGTCATTGCACTGCAGCCTATCAGCCAAAAAGACGACGCCACCCGCTTGTGCATTGAAACCTGTATCGCCCGCAACTGGCGACTGTCGATGCAAACGCATAAGTACTTGAATATTGCCTGATTCGGTTTCTGCCGGTGTTATTGCACCGACAAGACAGGTATTACCTGAGCGCCCGGCCTTATGGCCGGGCGTTTTCGTTTACCTGCCCGGCGGGCAGGATATAGGTTTGTGAAACAACGCTGTTCGGTAAAATCAGCTTTTGCCTGCGGTGTGTTTTTATTTTGATTAATAATCAATGGGTTAATTATTCAGCTTACGTCGATAAAATCGGTAGAATTTGAGCTGTGATAAATGATTCTATAATTCAATGGGTTATATTTAGA # Right flank : AGCCATAAAATCAGCGCACTCAGGTGCGCTGACGACACAGAAGCGAAATTACTCGCCGCGGTAGATACACCCTGCGGTGCAGGTCTCTTTGATCATCACGGCGCTCAGCAGCGGAACGATGGGTTTCAACTGATCCCAAATCCATTTTGCCAGTACTTCGCTGGTCGGGTTCTCAAGGCCCGGGATATCGTTAAGATAGTAGTGATCCAGACGATCATAGGTCGGTTTGAACGCCGCCTTAAGCTCTGCAAAATCCATGATCCAGCCCGTATGCGGATCCACCTCGCCGGTGATCTCCAGACGCACCATAAATGAGTGACCATGAAGACGACCGCATTTATGTCCGGCTGGAACATGTGGCAAACGGTGAGCGGCTTCAAACATGAAATCTTTAAATAACGTGGTGGACATTCTGAACTCTCTGACTGGCTAGAAAAACCGCGGCATGGTAGCCGAAATGACCTTTTTTATCATTAACTAAAATCGGCAAAAGCGATTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //