Array 1 167-1667 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOR010000194.1 Leptolyngbya sp. FACHB-711 contig194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 167 37 100.0 38 ..................................... ATTTCGCCTGAGTTGAGTTTTGCAAGGTAAGTTTCCAG 242 37 100.0 36 ..................................... AGGAAATTATTTGAATCGTTTGAATTGTCATTGTCG 315 37 100.0 36 ..................................... CCCAATCATTCCAGAGGAGCGAACCTATCTAGTCCG 388 37 100.0 34 ..................................... AGCACTCAGGGAATTACAGCGACGTGGCGAAATA 459 37 100.0 34 ..................................... ACTGGAATCGTGCGCACCTGAGTGTCCTTCAAGT 530 37 100.0 39 ..................................... TAACCATAGGGATAACGAAACAATATTTGCAGGGATTGG 606 37 100.0 36 ..................................... CCTTTTGGAACCAGACTGAGAGTAACCAGAACAGAT 679 37 100.0 37 ..................................... TCTACTTCAAGCAGATCAAAATCATCCCAGAGTGCAG 753 37 100.0 36 ..................................... CGATCGTAGCCAGCACGAAAGAGTTTTTTGTAGAAA 826 37 100.0 35 ..................................... ACCCCGATCGGCTGGAACGTTTTATGTGTGTTGCT 898 37 100.0 38 ..................................... GAACAACAAAGGTAATATCGCTTTTTCTGTTGAACAGG 973 37 100.0 34 ..................................... TTTGATCTGCTCCTGGCAACTGGCGAAGGCTTGT 1044 37 100.0 35 ..................................... ATCTCCACGTTGCCTGTACCACCCCAGGTAACCGG 1116 37 100.0 36 ..................................... ATAGATATCAGCGTTATTCGTTAAAGTTACCGTAGG 1189 37 100.0 35 ..................................... TTCTTAAACTGTCCCCCCTGCTGTACCCACTGATA 1261 37 100.0 35 ..................................... AATCCAAATGACCTAAGACCGAAGGACAGTTAAAA 1333 37 100.0 38 ..................................... CCTGTAGGGCCTTCACTTAACAAAGGAGGTTTCGCGTG 1408 37 100.0 36 ..................................... TTTGAAATCATGCTCGGTCATTTCAACGATATGAAT 1481 37 100.0 37 ..................................... CCCACGTCCAGAAGCCACTAGCAACAGATGGGGGGAA 1555 37 100.0 39 ..................................... AAGTGATTACACTGAGGACAAGCTTTTAGAGGAACTGGA 1631 37 97.3 0 ..........C.......................... | ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 99.9 36 CTCGCTAAAATCTGAATCCCGCTTGCGGGACTGAAAC # Left flank : GTTTGCGAAAATGGCTAGAACCTTGACAAATCAATAAGCTCGAGAATCTAAATCGTCTTGAAAAGGGGCGATCGCCTGTCTTTTGAAGCTCTGAATCGGCTCAAATTTTGAGGTTTGCCAAAACAGCCTCTGGAAATGGCTTGTAGTAAGAGCTTTAGGCTACGGAC # Right flank : CTCATCTAATTCCTGATACTGACAGACATTTCTCGCGAAAACTAAGTTTTAATCATTGCTAATGATCATTGCATCTTTCAGAATTGCATTACTCAAACTGGTCAGGGTTAAATCGCGAACATGATCAGCCGCAGCACGGGCTGATTCAGCCAGAATTGTGTCTGTTTGAGGAGTGAGCTTAGGAGCAGAAATCAAATAGCCTAAGCACTTGATGTAGTTGTCCTGTAAATTTGCGATTGACAGCCGCTTGATTAGAGTTGAATCGCCATCCCGGAATGACTGCAATGCTTGCTTCTGCTGTGCTGTCTGAGGTTCGCCCAATGTCTTGAGAATGACATCTACTGCGTTTTGAACGTATGCGGCTGTAATTTCACACTTGACAGGATTTTTGCTCATTATTTTATCTTCTGTTAGGACTGATACAATCTATTTATTAAGTGTAAGCTTATACCCTGAAGTATAAACCTGGAAATGTTTTAAATTCTCCTAGACGTGAATGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGCTAAAATCTGAATCCCGCTTGCGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 10759-11016 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOR010000471.1 Leptolyngbya sp. FACHB-711 contig471, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 10759 37 100.0 36 ..................................... AAGTGCTGCCAGGCGTGATCCCGATGGGTCCGCCGG 10832 37 100.0 36 ..................................... GAGCCATAGCGTTTTCAGCAGAAGATAAAGTTTTTT 10905 37 100.0 38 ..................................... TTAAAGGTATTAAGAACGGACGGGAGTTTTCAAGCAGT 10980 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 100.0 37 GTCGCTAATATCTGAATCCCGGCAACGGGACTGAAAC # Left flank : GTGTGTTCGAGTGCTTCCTGACCGCACCCCAGTTCGCTAAACTGCAAACCCAGATTGAGACGATCGTGAAGCCGGATGAAGACTCCGTTCGAATCTATGTGCTGGACGCTGGAGCCGTGAAGCGTACCCTGACCTATGGTTCGGAAAAACCGCGCCAGGAAACAGCCATCATTCTTTGACGATCGGCTTGCCGCTGCGCGACGCGCCGTAGCGCGATGCGATCGCCCCTCTTCAACCCTGTTTGTGATCCAAAGCATTCCACTCTACCTGCGGCTACTATACGATAGAGGGGTAATTTTTTTCGCAAACCGAAGCGGGGTCAAAAACCCAGGGGGTTCGCGAAAATGGCTAGAACCTAGAAAATAGAATAGTTTTGAGTTTTTCCCTTCTACTGAAACTGGGAAATAAGTGCCATATTGAGCTTCAAAAAGTGCCCTTTTAGGGAGCTTTGCGAAAAGTGGCTCTAGAATCCAGATAGGATGGGCAATACAGGCTGCAGG # Right flank : GTAAAAATGGGTTGACAGTAAGGTGCAAGAACGAGTAAGGTCGCTAATATCTGAATCCCGG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTAATATCTGAATCCCGGCAACGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 8706-9533 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOR010000476.1 Leptolyngbya sp. FACHB-711 contig476, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 8706 37 100.0 36 ..................................... CTGCCAATCCCCACCACGGGCGCAGTAAGTGAGCGA 8779 37 100.0 34 ..................................... TTTGACTATGTGCCGCTGAATCAGCAGTCTAATC 8850 37 100.0 34 ..................................... TCGGGCAAGGTGAGCTTAGGGGTAATCCTGCAAG 8921 37 100.0 35 ..................................... GGGCAAGACCTTGGGCGGAACGCTCTCCACAGCAG 8993 37 100.0 33 ..................................... ATTTTCTTGACCAGATTGATAAGCAAATTAGGG 9063 37 100.0 36 ..................................... TGATCCCTATCCGGCGGCCGTTTTCCCCCTTAATTG 9136 37 97.3 36 ....................................G GGATTCTGCATTGTCTTCTCAGTACGTGGCGATATT 9209 37 97.3 36 ....................................G GAGCTGAAGCGGGAAATTGCGCTACAGCAGGAAGCC C [9217] 9283 37 100.0 33 ..................................... TCTTAGTCAGCGATCGCGAGTCGCAGAGTTGCC 9353 37 100.0 35 ..................................... ACAATTCGGAATCCTCGCGCCCGTGCCCGATCGAT 9425 37 97.3 35 .................C................... AATACAGAGCTGATTCTGAATATTGCCTCCCTGAT 9497 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 12 37 99.3 35 GTTAAACCGCATCTCTTTGATGTGGCTCCGTTGAAGC # Left flank : ATTGGCTAGGGTATGGGCGTGAGAATGGGAAATGGCTTGTGAGAGCTAGGTGCTTAAGTGAGGAAGCAGGCAAACAATTTAGCGGCTATCGCTGGCAAGCGTTTCAGCGTCGGCGTTATCACGGTGATGGAAGAAAGGAGTCCGATCGCGGATACTGGATGGAAATTGAGTTTGCTGAACCGAAAGCAGGTCCAATCGCCCTCGGCTATGCCGCTCACTTTGGCTTGGGTGTATTTGTCCCTGTTTTTGGACGAACGGATAGGGAGGTGTAAAAATGCGATCAGCATAATTGAGGCTGCAAACCTAAACAGGATAAGCCATACAAGAAAAAGCACCAAGATTTGATCCGCGCAGCCTGCAAAACCCTTTTGCATAAAGGCTCTAAGCCCTTCTGAGTAGAATCAGACTTGTCTTTAACAGGTGTTAAAAGTGGCTCAGTATAGTGGTCCGCGCAATAGAACCTTGAAAACTCCATATAGTAAGTGTTTCAGAAGCCCGCA # Right flank : CCAGGCAACGATCAACCTATACAGTGACTTTTTATTTGTCGTGGAAACACATTAGCGTCGTTCGAAAAGCAAAGCTAAACCTGGCTTACTTTTCTGCCTAAAGCCAGCTTGGCAATCCTGATGACCGGATGCTAAAGCACTGAGCGAACTCGCTCAGCAATCCTGCAACAAAAAAGGTTTTGCTCAGCGACACGAATTTGTCTCGATGGCATTTATTTTGGCACTGTACAAATTGCGTCAATCTGCTCAATTCGTTTCTGTAATAGCTCAATTTGCTTGTCTAATCGCCTAAGAGTTTTGCCCCGATCGAGCGCTGCTTCATACTGTCCAACCTCAGAAGCCTTGATGTATTTTGACTTCTTTCCAGCAAACTGAGCCTTGCGGCTCCTCAACTGCCAGTGAGCTTTACCCGTTCTGGCAGTCCCGCCTGGTTTTGAGGGAGCAAGCCAGCAATCAAACAGAATGTCTCCCTCATTGCTGATCCGGTTTCTTTCAGCTTC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACCGCATCTCTTTGATGTGGCTCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 13604-13860 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOR010000561.1 Leptolyngbya sp. FACHB-711 contig561, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 13604 37 100.0 36 ..................................... GCGATGCACGAAGCGACCCATATCTACGAGAACCAG 13677 37 100.0 36 ..................................... TTTCAGCGACTCTATCAGCAAAACGTGGCCGCCGCA 13750 37 100.0 37 ..................................... AGAATGCCCGGATGCGGGTAACGCTGCCAGGGCAAAG 13824 37 94.6 0 .................................C..C | ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 98.7 37 GTTGCGATCGCCCTTCCAGTCGTGGAGGGGTTGAAAG # Left flank : CGTCTGCCCATAAACTTTCAGCGTTGCAAGCTTAACAAAATTTGAACCTTGACAATGTAATAATCTTCCCAATAGCGCGCCAATCCTGTAAGGATAGGTGAAAAATATGGAGCAGTTTAATTGCTTTCCGCTCCAGGTAGTTGTCCGTTTCCTCTGTAGAGTTTCTCTACAGATATGGTGTAGGGTCGCGCCTAGCATCAGGAAGCAATGTTTTCATAATTGTGGTGGTAAGCCATTTAGTTATGAGGATACAGGCATACGTGTCATGGCAGCTACTAAATCGCCTCCGAGCAAGGAGGAACTCTCTCAAATTTTTGGCAAACCAAAGCAAGGGTAATATTCCTGGGAGGTCTGCCAAAATCGGATTCTTTGCCTAATGGGCTCTTCAAGGAATTATTAAGTAGGTATAAAGATTTACTTAATAAGAGAAATTTGAATGAGCCCCCTTTGGCAAGGAGTACCTTAAAAAGTTGGCTGTGCAAGGGCTTTAAGTTGCCAGA # Right flank : CTTCCCACCACATCAATGAGTTACACCCACTCATGCTTTGCGGTTGCCCTTCTACCTCTAATCTAGGTCGAAGGGAGTAGACTTATTTCCACCCACTTTTTAGTCCTTTACAGCGATCGTATTAAAGCCCTCAAACAGGATTGAGAGAGTTGAAAGGAATGTCACCTTCCCAAACCTAACTAGACATTAATCCTTTAAAACTGTTTTGAACCAGTACCTAAAAGCTATTAAAGGCTGAAAGCACTATGACTTCGTTCTTTTTGACAAGAATTCTTTAAAACTGGACAAATAAATGTTTAATGGACATCTAAGCGGGTGATGGGACTCGAACCCACGACGTTCACCTTGGGAAGGTGACATTCTACCACTGAATTACACCCGCGCGACCGATTAAAATCGTGTTATTTAGCATAGCGTATTTTAGACCAATCGATCGATTATTCCGTGACTGAACTGGCTTAATCAAGTTACTCTTTGGGCATTGGTTGTGTTACAAAAAA # Questionable array : NO Score: 2.80 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGATCGCCCTTCCAGTCGTGGAGGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //