Array 1 138574-140578 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMXD010000004.1 Bacteroides fragilis strain BSD2780061689_150309_H4 NODE_4_length_415184_cov_25.1266, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 138574 35 100.0 34 ................................... TTAAGACTCCGAAGATTGACCGAGGCGGCTCGAT 138643 35 100.0 37 ................................... AAATCAAAATCACCTGCAAAACCAGAAAGCTGGTTGA 138715 35 100.0 33 ................................... TGCTAAAGACGGAACAATATATTATGCTCCGCA 138783 35 100.0 34 ................................... GGTTACTGAAAGGCATTACCAGTTGAGAAATCAT 138852 35 100.0 35 ................................... AATTTAGTTGCGTGGATATTGTTTGCCTACGCAAT 138922 35 100.0 35 ................................... GCTGTCGAAACAGCAAAGAAGCTCGGAATTGACTT 138992 35 100.0 33 ................................... ATTCAGAGATAATTTTCTGATTTTTACAAAAAA 139060 35 100.0 34 ................................... GGATTGCGGAGGCGGCCCTTGGACTCAGAGAAGT 139129 35 100.0 38 ................................... CTCTTGGTTTAGCTCTGTCAGTAACAGAAAGCTTTGAC 139202 35 100.0 35 ................................... GCTCTTGGTGTCATATCCGTTATTATCGGGATATT 139272 35 100.0 37 ................................... AATTGGCGTAACCGGTTTCTGGAACAAACGCAAAGTC 139344 35 100.0 34 ................................... ATTACTTCTATATGCAGTCTCACGGAGAGACAAT 139413 35 100.0 30 ................................... ANNNNNNNNNCAGTCTCACGGAGAGACAAT 139478 35 100.0 38 ................................... TCAAATTGTCAGATTTGAAAGCTGTTGAAGGTACCAAA 139551 35 100.0 34 ................................... ATTACTTCTATATGCAGTCTCACGGAGAGACAAT 139620 35 100.0 38 ................................... TCAAATTGTCAGATTTGAAAGCTGTTGAAGGTACCAAA 139693 35 100.0 35 ................................... TAGGTTGTTTAGGGCTGCAAAAACTGCGGAATGGT 139763 35 100.0 37 ................................... ATTATTTCACGCACCATGAACTCTATGATGCCATTAT 139835 35 100.0 38 ................................... TCTGTCTCGCGGCAAAAAGCTAAATGCTTGTTTGAAGT 139908 35 100.0 37 ................................... ACAACTTTATAAGGACGATAGTCCGATAAATTTTTTT 139980 35 100.0 35 ................................... GGGAGCAAAACGGAAGAAAATTAATGAAGATAAAG 140050 35 100.0 37 ................................... ATTTAGTAAGAGCTAAAAGTATATATCGAACCATTCA 140122 35 100.0 38 ................................... TTCTGACGGAAAAATACAAACAAAATAACAACTAATGG 140195 35 100.0 37 ................................... TATTTGCCAAAGTCACTCAGGAGTATAAGGCTCGAGT 140267 35 100.0 35 ................................... CTTATTTGAATCGGTGTTTAATCGTCAGGAAGGCC 140337 35 100.0 32 ................................... TTGAGATAAATGCCAAACCGGTTTTGATGATT 140404 35 100.0 34 ................................... AATCCTGATAAATGGTATTGGTCTTCGACCGAGT 140473 35 100.0 36 ................................... ATTTACCTCCGAACCGTTGGATATTGAAGAGGTCAA 140544 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 29 35 100.0 35 GTCTTAATCCTTATTATACTGGAATACATCTACAT # Left flank : TAATATCCAAAGCATCTACAATGTAATTTACAACACGAACAAGATGGTTGGGAGATATTTTTTCCGATAAACGAACCGGAAAAGAACATTTTGGCTGGAGGTTAACTCTCTAAATACTATCTTAACTATTACTGTTAATTTTTCACAACGGTAATATGAGGCTTTTCACCGAAATAAACAATGGTAAAAGGGGCTATCCGACTTTTGGGGGGCACTTTGCTTTTTGGACAGCCCCGTAGTATTATCGCCTTTGTGTATTTTTGGTAAGCTATTCCACAGCTTATTAAAATAGTTACCAATAAATTAGTTCTGCCTCTCTTCTTCTTTTCCTGCTTATTGATCATTTTCCCAATGTTAAAAGCAATACCGAAGTCCATGACGATCTTATCCAAGCCGTTATGTCTGAACTTCTCCCCTTATTCTATTTAATGTAGTTAAATTTTTATATTGGAATACATCTACATGCTAATAAGGAAAGTTTGCAGTATTTCTGGGCATTG # Right flank : TATATTGATAATCAGATTATTATAAAATATGTATTCTATCTGTATAAATATATAATAACTTATTATTCAGTTAGATAGATGAAGTGTTGAACTGATTTTCGCAAATGTACTCTTTTTTTCTGTAATTTAAATAAATAATTTGTAGAATATAGAGATATTTAATTGATTATCACTTTGATATGATCGATTCATTATTCGCAAATGCCTGCTTCATTTGTTATATTATAGCCTATTTCGAAAATAAGATTAATCTTATATTTATAATTATCAGATAATAAGTACATTATGTCAAAGAACGAATTGCTTATTTGTTTTTTTTCGCAAATGATTTACTAATATACAAAAAAGCTAGTTCTTTCGTAGCTTTTATACATTATATATTATTTTTCATTTAAAAGAATAAGCAGAAAATCAATGAATTAAACAAATTCTGATTTTCGCAAGAGGTTTAGACTATTTCGACGGTTTTAATTATCTTTTTTCGTATAGGTTGATATATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTATACTGGAATACATCTACAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [68.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //