Array 1 464875-462644 **** Predicted by CRISPRDetect 2.4 *** >NZ_MZGU01000004.1 Methanobrevibacter woesei strain DSM 11979 MBBWO_contig000004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 464874 37 100.0 35 ..................................... CAAACCCAATGTTTGATAAAAGTAAAAGGCTTCTT 464802 37 100.0 37 ..................................... TAAAAGATTATAAAATACTAGACACTATAAAAGAAGA 464728 37 100.0 35 ..................................... ATGTATGAAAACATTAAGAAATTCATCAGAGAAGA 464656 37 100.0 37 ..................................... TAAACATATGCTTTCACTACCAACAAATCATCGATGA 464582 37 100.0 37 ..................................... AAGAATTATTAAAACACGACCCAATAAAATACTACAT 464508 37 100.0 37 ..................................... AATAAACAATATAATTATTGTGAGTTAGGAAAAATTA 464434 37 100.0 38 ..................................... ATAGATAAAAAATGGCAAAAAGCAATAAAAATACAAAT 464359 37 100.0 36 ..................................... ATAGATAAAGATATTAAAACTTTATTTAATGTTTTA 464286 37 100.0 36 ..................................... ATAGATAAAGATATTAAAACTTTATTTAATGTTTTA 464213 37 100.0 37 ..................................... AATTAAATTTTAATGAATTAGTAACAAAACAATTAAT 464139 37 100.0 35 ..................................... AAAAGGGATATTAGGGGTTTAAATAACCTTTTTGA 464067 37 100.0 36 ..................................... AAAATGCTCTGTACAAAAACCTATTGTCGACAAAGA 463994 37 100.0 37 ..................................... TAATATATTTTATGAAAAATACGGATCTGTCGACTCC 463920 37 100.0 36 ..................................... GAATGAGTTGGTATATGATTGACTCAGGAGTTACAA 463847 37 100.0 35 ..................................... ACTACTAATTAATCTATTGGAGGTGGTTCATGTGA 463775 37 100.0 36 ..................................... TAGTGTAAAAGGTGGTTTAAATGAATATAAGACAAC 463702 37 100.0 35 ..................................... ATGACAGTAGAAGAGATTAAAAGCAGTATAGACAA 463630 37 100.0 37 ..................................... ACTTGAAGAAGTAATTGCAAAAATGGAGGCATTCTAA 463556 37 100.0 36 ..................................... GCTCAAATTTGATAATCCAAATTTCTAGCTTGTATT 463483 37 100.0 36 ..................................... ACATTATATCATGAAATGGGGCATTGTCTTGACTTC 463410 37 100.0 35 ..................................... AAAACAGTAGAAAAAATTCTTGATGAATATAGAAG 463338 37 100.0 37 ..................................... AATAATAAAAAATTTGTGTAAGACTTTATTGTATGAC 463264 37 100.0 36 ..................................... GTGATAAATATGATAGTTTTAAAAATACTTAAAGAA 463191 37 100.0 36 ..................................... ATACAATCGTCCTTAACGTAAATAACCCATTCAGAT 463118 37 100.0 35 ..................................... AATAATAAGGATGAAGAATTAGGATATATAAATAT 463046 37 100.0 36 ..................................... AATTAGTAAAATCCAATATGAAGCAATGACCGAGGA 462973 37 100.0 37 ..................................... TAGATATGTGGTTAAAAAACAGTGATGGATATGATGA 462899 37 100.0 36 ..................................... AATAGAAGAAGGGAATGGTGCATGGATAATGGAAAA 462826 37 100.0 37 ..................................... TTGAAAACCAAAATTTCAACAGATTTATCATAGGAAA 462752 37 100.0 35 ..................................... ACAAGAAGAAAAAGGAGAGCTTTAAGCTTTCCTTT 462680 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 31 37 100.0 36 GTCGCAATCCTTATTTTATTGGAATCCTTTCTGCAAT # Left flank : AATAACTTCAGCATCAGAATTGTTTAAACTGTTTAGTTTGATTAAGGGAGTATTTCCAATAGCTTCACAGGCATTATTAAGAATTCCCCTTTTAAGTTCAGGAATTTTGGGCATAAAAATCAACTCTAAATAAATAAAATAAGTCAGAAGTGATTTACAAAGGGCAAAAATACCATCACCACCATAAAAAAAAGTTTTTACCCACTGTAAATCAAAATAGAAATAACAAATTGATTTACACAGACATCACATCTCCACCATAAAAAAAGAATGTCTGCTTAATGTAAATCAACATAAAATAATATGTTTTTTGTATTATATAAAATTTTGTTTTAATTAAGTGTGTTTAAAAATAAATTTGAAAATTAGCCTTATTTAGAAATTATTTTTGCAATATATAAAAATAGCTACTTAATGGTTCCAAACTAGATCTTAAATTATTTAGTGGAATCTTTTCTGCAATACTGTTAAAAGAATTCTATAAAGTTAAAGTTAAAGAT # Right flank : AGGTCAAAAATTTACTTAATTTTTCCTATAACCTGCAGAAAAGTTGCGTTTTTACAAAGTTCATGTGCAAATATTAAAATAGAATACACTTAATAAATATTTGCACAACTAATATTTATAATTATACCATCCAAAGCTTAAATAAACAACCAAATATTCAAAATATAAAGGTATACTCTAAAGTTTATCAATAAAAACATTCAAAACATAGTTTACAGAACCAAAAAATAGCTTAAAACAAATTTTATTTTTAAAAGAAAAAATAGATAAAATTAAAAATTTAAAAAAATAGCTAACATTTGCACAATTACCATCTTAAGTAAAAAGGCACATATGGAATATTATCAATTAAAAAAGACACAATCTTCCTTGATTGACCCATAATAATATCACAATAAGCTATTTTCTTATCACCATAAGTTATCTTATTAGACAACTTATTTAAAATATTTTGAATCAATATTTGTTTTCCACTATTTTTAATTAAAACTGATCTATCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCTTATTTTATTGGAATCCTTTCTGCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 671539-672880 **** Predicted by CRISPRDetect 2.4 *** >NZ_MZGU01000004.1 Methanobrevibacter woesei strain DSM 11979 MBBWO_contig000004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 671539 30 100.0 34 .............................. TTGTACATCCAATGGATATTTCCATGATGGCACA 671603 30 100.0 37 .............................. CAAGTCAAGAGGATTATACTCCTATCCCTGGTGTTAA 671670 30 100.0 38 .............................. TATATTCGGCAAAGAAAAATATAGTGGTCTTGGAGGAA 671738 30 100.0 31 .............................. CAAGAAGAAGAGGGAGGAATCTAAGATGGAG 671799 30 100.0 36 .............................. TATTCAAGTGATGTGTTTAAATCTGCGAATTTTCTA 671865 30 100.0 33 .............................. TTGAATACTAACCATAAATCTTTTGAGGGTGAT 671928 30 100.0 38 .............................. AGTGTCATTAGAGGAAAAAGTAACAAACCTCTTAGCTA 671996 30 100.0 35 .............................. TAATAAACGAGGTTATCGAATCCGAGGAGGACGAA 672061 30 100.0 35 .............................. GTTGAAAAGTTGTGATGAAATAGTTCGTGTTTCAG 672126 30 100.0 36 .............................. ATTCCATTCTTTTTCAATATGCTCCAACATTACATT 672192 30 100.0 36 .............................. GGTGAAAACAAAATCACTTTTACAAATGTGGATCTC 672258 30 100.0 38 .............................. CAATCAAATCCAGAAAAGGAGAAAAGAATGACGACCCA 672326 30 100.0 34 .............................. TACAGAAGATACAATGATAAAGTTGATATTGGTC 672390 30 100.0 34 .............................. ACAGATCCAGAATTGGTGGAGCAGATTAAGGAAG 672454 30 100.0 36 .............................. AATGCTAGGAGGAAATATTGTAGTGATGAATGCAGA 672520 30 100.0 37 .............................. TTCATTATGACCTCCTTTTTGATTGGGAGAGTGGATT 672587 30 100.0 34 .............................. TTCCTTTTAGACAGATTTGAAGTGAAATATTAGT 672651 30 100.0 37 .............................. GTAAAAGAAGCCATCAACTCACAGAAATATGCTTGTT 672718 30 100.0 38 .............................. TAGCTACCATTGAAGCATATTGCACGGTCATCAATATA 672786 30 100.0 35 .............................. TACACAATAAATATTGATAATTTCACAGCATCAGA 672851 30 90.0 0 ................T........AT... | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 99.5 36 ATAAAAATCAGACTATATTAGGATTGAAAT # Left flank : AAATGGATTGTTAGATATAATTGATGAAGAAGAAGATTCAATAATTATTTATCCATTTGAATTTTTTTCTGAAGTTGAAAGAACTGTTTTAGGTGTGGAAAAATCACCCATTGATGAAATTTTGTAGTTATTTTTAATTTATTCTTTAAAATACAAATTTTTTTAATAAAATAATTAATTTTAGTTATATTTTTATTAATTAAAGACTTTATTATTCTTCGTTTATTCATTTTTATTAATAGTATTTATTAAATTGTTATTTTTTGGATTATTCTAATTTAAGAATATTCAGTTATTAATATTTTAAACCAGTTATTCCTATTAAATTATCTTTATTTTATATAGATCTTTTATTTAATCTCATTTTTAACAAAATACAACATTTTTAGAAATTTATTTACCTATTTAAAATTTAATACAAATCATTAATCAAAAATTTTAAGTATCAAATTAAACAATAATAAATTGTTTTTAAGCTATTTAAAGGAAAAATCCTGCCT # Right flank : TATATATCTGGGGATGTAGCAGAAACAAATAAATAAAAATCAGACAAAATTTATAAAGTGAACCACATGTTTAGAGAAATGAGAAGAAAAAATCATAGCTTAACTAAAGAAGAATGCATTAATATTTTAAGGAATGCACCTTCAGGTGTACTAGCTGTTTATGGAGATGACAATTATCCTTATGCAGTACCTTTAAACTTCGCATACAAAAATAATAAGATTTATTTTCACTGTGCTACTAAGGGCCATAAATTAGATGCAATAAAGAAAAATAATAAAGTTTCTTTTTGTGTTGTTGATAGTGAAGAAGTTATTCCAGATAAATTCACAACAGATTATAGAAGTGTTATCCTATTTGGAAAGGCAAGAATTATTGAGGATAATAAAGAAAAAGCAAAAACTATTCTTTATCTTTGTGAAAAATATTCTCCAAACCAGAAAGGTAGCTGGCAGGAAACAATAAAAAATTCAATAAATAGATTCTCAATTGTTGAAATAGA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAAAATCAGACTATATTAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //