Array 1 1-2508 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSMT01000024.1 Acinetobacter baumannii strain ABUH396 contig_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 1 29 100.0 31 ............................. TTAAGTGTTTGTAAGCAAAATCCAGAAGGCA 61 29 100.0 31 ............................. ATCACAGAACACAGGAAAGTTTATAGTTATA 121 29 100.0 31 ............................. GCCTCGATAGCTTTAGAACCTCTGAGGCTTG 181 29 100.0 31 ............................. AATGGCTCTGGTCCAGATGGTTTCACTCTCA 241 29 96.6 31 ............................C TACAGTACCTTTCATGTAATAAACTGAACAC 301 29 100.0 31 ............................. GATTTTGGCGCCCACCCAATACAAACATTTG 361 29 96.6 31 ............................T AAACTGATCAAAGTATTGATGTATTGCTTGA 421 29 100.0 31 ............................. CAAGATGCAGCTGCTTTAGAGGCTCTGGTTG 481 29 100.0 31 ............................. AAGGGCGTTGCCTTTGATAATGACAATTGTG 541 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 601 29 96.6 31 ............................T AAAATTCTGGAGCAGAGGGCATGGCAGATAA 661 29 100.0 31 ............................. GCAAAGACAGGTTTAGAAGTCACCTGATATT 721 29 100.0 31 ............................. ATCATCGAACATATTGTAAAATTCACATTGC 781 29 96.6 31 ............................C AGTTGCAAACAGCTCCCAAAACATTTGCATT 841 29 96.6 31 ............................C CGCACAAGATTACATAGACAAAGTGCTCGAT 901 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 961 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 1021 29 96.6 31 ............................T TTTGTTTATACGGTTAATAAATCAGTACAAT 1081 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 1141 29 96.6 31 ............................T GCTTGGACCCATGAAATTAAAGGAACTTTCC 1201 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 1261 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 1321 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 1381 29 96.6 31 ..................A.......... AAACACCAAGCCATAAAATTAATTACAGCAA 1441 29 100.0 31 ............................. CAGGGGTCAAGTTCAGAAGATTTACGTTACA 1501 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 1561 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 1621 29 82.8 31 ...GC....T...C..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 1681 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 1741 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 1801 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 1861 29 100.0 31 ............................. GCTTCAACACGTGTGCTATTAGGCGGCAAAG 1921 29 100.0 31 ............................. TAACCTTGCAATCTTTGGTTTCTGGGTGTCT 1981 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 2041 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 2120 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [2143] 2180 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 2240 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 2300 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 2360 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 2420 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 2480 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 42 29 93.9 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-47] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //