Array 1 615356-616183 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXSR01000001.1 Enterococcus faecalis strain BIOML-A2 scaffold1_size818935, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 615356 36 100.0 30 .................................... GCTTCGGCAATGGTTACATCAGCAGTTAAA 615422 36 100.0 30 .................................... CTACCTGCATTTTTAAAGGAATGAGCGTGG 615488 36 100.0 30 .................................... ATTATCAGATGCTAAACGTAATGCAGATTG 615554 36 100.0 30 .................................... TGCGGTTAAAGCAAGCGATTCGGATATATA 615620 36 100.0 30 .................................... CAGAGTTTCAAGAGCTGCATGAATTATTCG 615686 36 100.0 30 .................................... TAACGAAGGGTGTAGGATTTTTAGGCAAGG 615752 36 100.0 30 .................................... AGCCAAGATTGAAGATAGAGGTCTCTTTCA 615818 36 100.0 30 .................................... AATCTTCTCATTTGTATTCCTCCAAAAGCA 615884 36 100.0 30 .................................... TGTAATTAGAAGAATAAAGAGCTGTATCGG 615950 36 100.0 30 .................................... CTTTCAAAAGAAAATAATTGATTCAATTGA 616016 36 97.2 30 ........................A........... TCGTCTGTGCGCCGAATAGATAAAGAGGTG 616082 36 100.0 30 .................................... TAGTTACAGATAACTTTCTACCAAACCCAC 616148 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.8 30 GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : GCGCCAGATTGGACTTGACTCAGACCTGTTCCGCTTCCGCCACCTTGGACATTAATAAATCTTCCTGGATTTTGGCTTTGATATTCCTCACTCGCTGTCTCTACTAATGGTTGTAAAGCTGATGAGCCTACCGCTGTGATGGATTCACCACGATCAATCCATTTTGCACATCCTGTCAAAGTAAGTATACTTGCCAAACCAATAAATAATAGCAATCTTTTTTTCATCGATTCATTATTCCTCCAATTAATTTCAATCCATTCTATTTTACCATTATATGTAGGACTTGAAAATTATAAGTTATCAATTTGTTGGTACAACTGAGAAAACTCTTAAATTAAATAACAAAAAGTATCTGAAGAAGCCAATTTGGCTGTTGCTTCAGATACAAATAATTATGCTAGAAAGATGACTATATTTAAAAATTTAGTGGGGATGGCTTTTTTGAAAATTATTTGGGGTATAAAAACTAAACGTCAGAAGCTAGTTCATAGGTAATG # Right flank : CCTCAAATTTAAAATTTGAAATCTCATTAATAATCCTTTTGATAAAAAATATAACTTTACGCGGTTAAAATTCCAGACTCACTCTTTCCGCAATAACCGTTCGCGAAAATATTGTTCTTCCAATACAGTGAGCTTTTCCATCGACGTCTCGACACACTCACTATTGTCGTCTAACAATTCCTTCAACAATTTTAATAATATCATATCTTTAGGTAAAAGATAATTTTTTGTATACTGATCACCAACAAAATGACAGACTCGATAAAAAGCATCAATTAGTTGTTGATTTGTCCAAGAGAGTTGATCTGGATAATGTCGCTCAATACTTTGACGAAAAACATCAAAAACTGGCAACTGCTGATACTTATCATATAACAAAATCGTTTTCTCAACATCTTCCTCCGTATACGGTAAAGGCAAGCTTCTATTACTAAAAATAAAAAACTTCAACTGCTTTGTTTCTTGAGCCAATTTCTTTAGCTGCTGAAAGAGATAATAAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 537217-537385 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXSR01000002.1 Enterococcus faecalis strain BIOML-A2 scaffold2_size567076, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 537217 37 100.0 29 ..................................... GCCTTGCGGACACTGTTCGGACACCTTTC 537283 37 97.3 29 ....................................C AATTACAATTCCAATAGGTGAAGCAATAA 537349 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 3 37 99.1 30 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : TGTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGTCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTTGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAATTCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : ACCAGAAAGAGTTTTACGATACTATGATGAGTTTTAGAGCCATGTTGTTAAAAAACAAACTATCACCACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //