Array 1 21616-23198 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWSF01000031.1 Adhaeribacter rhizoryzae strain DK36 contig31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 21616 37 100.0 36 ..................................... TATCTGGGATGTGAGGCAATAACAACTACCTCCAAC 21689 37 100.0 36 ..................................... ATAATTTTCTCGCTTGCATCGCTGGCCGGTTTTTCC 21762 37 100.0 38 ..................................... AAGCAGTACAACGAGTATTTTTACCTGGAACGGGTAAG 21837 37 100.0 39 ..................................... TAAAAACCACGGAATATATTACAGCATTCCAATAGAAAA 21913 37 100.0 37 ..................................... ATGCAAAGTGAGGTTGAAATAGAAGGGCCAGACTTAG 21987 37 100.0 36 ..................................... TTAATTAACCTGTTACCGCCGCCGTTAGCCAGTATC 22060 37 100.0 35 ..................................... TGGATGGGTACTTACCGGTAAGCAGAAAAATATTT 22132 37 100.0 36 ..................................... TTAGTTCAGCAGTAGATTGCTCAACCTGTACCTTTA 22205 37 100.0 36 ..................................... ATTAGTTCCTTTTGCGGTTCTGTAGAGGGGTTAGTT 22278 37 100.0 37 ..................................... ATGAGTTGTACTTAGCAGAACCTAGCGAAGATGGCAG 22352 37 100.0 38 ..................................... TTATAATTTCCGTTATTTGGGCTAAAATACGGGTTGGT 22427 37 100.0 36 ..................................... GGGAATCAAAATAATTGCCCACGTTGCGGCGGTTAT 22500 37 100.0 36 ..................................... ATTTAAACTACCAACGTTTTGCTGTTCCACCGTTAT 22573 37 100.0 36 ..................................... TTAGTTATCATTACTGGTCTAATGAAAAAAATTCAA 22646 37 100.0 38 ..................................... AATATTCATAGGCAGCATTATCTGAATTTAGATTCGGA 22721 37 100.0 36 ..................................... AAGACGAATACGGGCGCAATGGTTCGGTACGAATTA 22794 37 100.0 37 ..................................... AAGCACAAAATATCACCTTCGAATATCTTATTACCTT 22868 37 100.0 37 ..................................... TTCAGCAACTAATGATAATCGCTGTATACCCGTATTA 22942 37 100.0 37 ..................................... TTCAGCAACTAATGATAATCGCTGTATACCCGTATTA 23016 37 100.0 36 ..................................... CCTAAAATGGTATGTTTTGGAAACAGCCCCATATTA 23089 37 86.5 36 ....AG....T..........T..............T TTGAAATGGGCTTTTTCGAGCATGGTGCCCGAATCA 23162 37 81.1 0 .....T..T.T........AGT..C............ | ========== ====== ====== ====== ===================================== ======================================= ================== 22 37 98.5 37 CCTCTAATGGCAATTCCAGCACAATAAGGATTGAAAC # Left flank : ACCGCTCGATTATAAGTTTGCCCAATATAACGAGAAGATTTACGAGACTTACCGGACCCAACTGTATTGTTATGCCTGGCTAATTGAGCAGAACTTTGGAAAACCAGTTAACAAAGGTTTCCTGGTTTATACACGCAGCCAAAATAAGCTAGTAGAGGTTCCAATATTGGAAAGCGATAAACGCGAAGTAGAAACCTGTGCCAAACAGATTTACGAAATCATAGATAAAAATTATTTTCCGAAGGCTACCAAATACCGTAAAAGATGTTTAGATTGTACTTACCGGAATATTTGTGTACAATAACAGCTTTCCGGCTAGTAATTTATTTTTCTTGTACCAGAATTATAGTATAAGTTTTTGTATGCTAATTACTTATGCTTACGGAAAATGCAAATTTTAATATGAAAAACAGCTCTTTGACATGTTGTATAAATGTAAATTGTGACTTACTGTATAGCAGGTTAGTTATTGACAGTCAAATACTTGTATGTATATACGG # Right flank : CTATAGCTTGCATATACAAACTTTTTATGCCAGATTTGCGTTGTAAATATAAAGAACAATATTCTTTAATCGTATTTGGATTGGGGTGTCCCCGGTCGGCAAGGAGCTAAGGTAACACTTGGCTCTTTGTTTTTATGGGTGTTTCTTTAATCCATACATCTTATTCCCCTTACTGTATATTTTAGATTTTAAAATTTCGAAAGCTGGGTTATGCTTGACTGGATCTAGTATAAACCTAGCTATAGGATAGGCTACTAAATCAGCTAGTTGTAAACCATTAATATTATCTTTCTTATAGTTAAAGGAAATATGTGTGTTGTACTTGGCAAAACGATTCTTGCTCACATAGAAGGTGCCTCTACTCATTAATTTCTGAAAATGTTCCTCTAGTTTTTTATCTTCCTTATTGCCCCTTCTTTCTAAAATAATCTGTAGTTCACTAGCTCGCTCCTGGTTCTTTTCAATAACATAAATGGCTCGTTCCATCAAAAAAGAAAGTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCTAATGGCAATTCCAGCACAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //