Array 1 1217338-1217544 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE007347.1 Acinetobacter sp. CIP 110321 acPFF-supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1217338 28 100.0 32 ............................ TACAGAAACGGCAGTTATTTTAAATCAACCTA 1217398 28 100.0 32 ............................ GTTTTATGAAAAGTCTAAAACTGAGCCGATCG 1217458 28 100.0 32 ............................ AACGTAATAATAATGATGCCTGTGCCGTCTAC 1217518 27 85.7 0 ....................CA..-..T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : GTAAATGCGATTTGTCTTTGTAGATTACTTATTTCAATCGTATCGGCATCGACAATAGTAATCTTTCCCACACCTGCACGTGCCAATAGCTCAGCACTGGTGCAACCGATTCCTCCTGCGCCGATAATCAAGACATTCGCGAGTTTTAGTTTTTCTTGTGCTTCGATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCATTGCTTAGCTCAAATTCGTTTTCTAAATGGTCTGACACGTGACTTGCTTCTTTATCATCAAGGGTAATGCCGATTTTAAGTCGATGTAGGATTTGAGGAAAGTAATAAATGGGAACGAACACTGTTTTCTTTTGACAAAAAGCTATTTTTACCCCAATATTTTTCTTACTCTTTAACAGCTTAATCAAATCAATAAGTTACTATATCAGTTAAAAACTTTGGGTATTTCTGCCTTTTGGGATATAACTGAATGTTTTAACTTATATTATTTCAATTATTTTATA # Right flank : TTAATGTTCTAACTGGAGATAAGATTTAAACTGAAAACCACGATGTATCAAAGCGTTTAAAGAAATGGGAAATCTAATTCTGGCAGTTTGTAATACTTGAAGAACCCATGTTTTTTCGGCTAAAAATTCAAATAAGATCTTATCATCACATATCCTCAGACCAGTAAAGATATCGGTCTGATAAACCTGTCCTATCCATAATGACTCCAGCAATATATTTTTATCCAGATCGGCTAAGGCCAAAGTTAAAGTTTCCTCGAAGATACAATCATGGCTAAGGAAAAGAAGATAGCAGTGAGAATATACACAGACCACACCTTCTAACACTTTACCCTCAACCCTAACCCCTGTCTTTTTCCCTTTCACCAAGACTTCAGACTGGGGCAAACACTTATCTGTCATATCTTGGATCAATGCTAAACCGATATAATCAGCCACATACATATTCAACTTTGCCTAATAAAATGATTACTGATTATATTTCCATCTATTACTTTGAC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1833650-1836557 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE007347.1 Acinetobacter sp. CIP 110321 acPFF-supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1833650 28 100.0 32 ............................ TGTCAAATCTTTGAGCAACGGTAAATATGAAC 1833710 28 100.0 32 ............................ TAACAATACGAATTGTCCTGATGGCTATTATC 1833770 28 100.0 32 ............................ TTAATTAGATTGTGCGTTGTGGTATGCAGTAC 1833830 28 100.0 32 ............................ AAAAGTGCACGTAATCGATCAGACTCTAAACG 1833890 28 100.0 32 ............................ AGCAACATGGTCAAAAATAGCTTATTCTTTTC 1833950 28 100.0 32 ............................ TTTTGGATGGTCTCTTTGTCCATGACCAAAAG 1834010 28 100.0 32 ............................ AAGCACGTGCACGGCGTGGCCGCAAAGGTGCT 1834070 28 100.0 32 ............................ AACATCAACACATCGTTAAGGGTGCACTATAC 1834130 28 100.0 32 ............................ TTTCTCGCTATGAGAAGTATATCAATGACCCT 1834190 28 100.0 32 ............................ GCAGTGGGGACAAACCTTTAACGCCTGTTCCA 1834250 28 100.0 32 ............................ TCTATATTTGCAGCCAAAGCTCGACGTAAAAA 1834310 28 100.0 32 ............................ TTTGAACGACAGATAGAAATCTTTCATGTGAT 1834370 28 100.0 32 ............................ AGTACCAAGGATGAAAGCCTCGTCATACGTAA 1834430 28 100.0 32 ............................ TTTACCTTCTCTCGACTGGAGAGAAACCCCTC 1834490 28 100.0 32 ............................ TAAAAAAATCAAACATGTCGGTTAGGCGTTGA 1834550 28 100.0 32 ............................ TTCTTGATCATCGTTATGTAAAAACCATTCCA 1834610 28 100.0 32 ............................ AGCACGCTAGTGTAATTAAACTTGTTAGAACA 1834670 28 100.0 32 ............................ AATAGGTCAGGGTGCTTAATTGCTGTATGGAT 1834730 28 100.0 32 ............................ AGACCGAGGTGGAGGAGCTGAAGCTAGATTAC 1834790 28 100.0 32 ............................ CTTACCATTCCATCCGAATCGAGCAACTTTCT 1834850 28 100.0 32 ............................ AAGCAGGTACCAGATGATTATATTCCACAGAT 1834910 28 100.0 32 ............................ ATCTATCTGAATATTGGAGCAAGCTAGCTAAT 1834970 28 100.0 32 ............................ CTTCTCTAATTGAGCAATTAAGGGCTGATGCA 1835030 28 100.0 32 ............................ TACACCCGTTCCAATTGCTGCACCTCGCCCTA 1835090 28 100.0 32 ............................ CGGTTCAAATTCACCCAGCCCTTCGATCCTGT 1835150 28 100.0 32 ............................ TTTGATGTTAACTGGTTAATCCCGCCACCTAC 1835210 28 100.0 32 ............................ AATAGAGCCGATTCTGCGCAGTAGACCTATCA 1835270 28 100.0 32 ............................ TACAAGTTGGTGACAAAGGTCAAGCTTATGTT 1835330 28 100.0 32 ............................ TTAGAGATAAGTACACATGCCAGTGTTGTGGT 1835390 28 100.0 32 ............................ CGACCGTGACTCTATGAGCGTTAGAATATCAC 1835450 28 100.0 32 ............................ TTATCGGGATTTACATAGATAACATCGCCCTG 1835510 28 100.0 32 ............................ ACACGAGAGCGCTTTGTTTTAGAACGCTTGAC 1835570 28 100.0 32 ............................ TTAGCCTCAGCATGACCCTTATTCTCTAGAAA 1835630 28 100.0 32 ............................ AAACGATTAACTGGTGTTCTACATATGGCTTT 1835690 28 100.0 32 ............................ AATACCAGCCGCACTATCGAACAAGGTTATTC 1835750 28 100.0 32 ............................ TGGTACTTAGCAGCAGCGAATGCATCAACAGA 1835810 28 100.0 32 ............................ TTACCTCAGTCATGGCTCGCTCAACCCAAAGC 1835870 28 100.0 32 ............................ TGTTGAACGTACAGTTACTGGAAATCTAAGTA 1835930 28 100.0 32 ............................ TATCGAGTCCAATTGAGTTTATGGCACTTCCA 1835990 28 100.0 32 ............................ GTTCCTGAACGCATTTCCACTCATGCATTAGA 1836050 28 100.0 32 ............................ ATCAATGCCGACAACAGGGGTGATGCCACCAC 1836110 28 100.0 32 ............................ TAACTGTGACATTGAAAAGCTTGAACGTATGT 1836170 28 100.0 32 ............................ ACATCGTGAACAAGGCCCAAGGCGGTTCGGAT 1836230 28 100.0 32 ............................ TCAATCGTGTAGTAGCCAATTTGCACACCGTC 1836290 28 100.0 32 ............................ AATTGCATAAATAGCAAAGATGTGAATATAGC 1836350 28 100.0 32 ............................ TCAAGTTCAACCTTGTTGGAGTGAGATACTTC 1836410 28 100.0 32 ............................ AATCAATCTAGTCTTAACACTGTCACCGATAT 1836470 28 100.0 32 ............................ ACAACCTTGAGGCGGACGTTTACAGTATGTTG 1836530 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 49 28 100.0 32 GTTTGTCATCGTATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCATTATATAAACAACTTGCTAAAGGTTTTGGCCTTGAGTTTACGCGTGATGAAGGTAAAAACTCTCACGATACTATTGTTGATATCGCCAACAGTTATCTCGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTGGCTTTAAATGGCATGGGAATTAGCTTTGCCCTCCCTATTCTGCATGGTAAAACACGTCGTGGAGGTCTAGTCTTTGATCTCGCCGATCTGGTTAAAGATGCTTTTGTGATGCCAATCGCTTTTACATGTGCCGCAAAAGGATTAAATCAAAAAGAATTCCGGATGCAACTTATTGAAACCTGCCAAGATCAAGATCTTTTGGATTACATGTTTAGCTTCATTACTGATATATGCAGTAAAATTAAATAAAATCATATGATTAAAACTTATACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTATTAACTTAACTCTA # Right flank : AGCCAGTAGCTTGCTTAGAATTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTATGTTTGTCATCGTATAGATGATTTAGAAATGTAACGGTGCAACTTACTGCAAACGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTCATCGTATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: F [matched GTTTGTCATCGTATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1837061-1837928 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE007347.1 Acinetobacter sp. CIP 110321 acPFF-supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1837061 28 96.4 32 ...T........................ ATCACCATGACGATATAATTCAGGGTCTTTGA 1837121 28 96.4 32 ...T........................ GAAACTTTAGCAGAACACAGTGAGGGTGCTTT 1837181 28 96.4 32 ...T........................ ATCTATGGCCGCTGGCTTGGCTCAATTGCAAG 1837241 28 96.4 32 ...T........................ CTGAACATTATGCGGGTCGTATCAATATCGAA 1837301 28 96.4 32 ...T........................ CAACACCAGCACCCACGCCAGTTGAGTCATAG 1837361 28 100.0 32 ............................ TCCAGAGCGTAATGATTTCAATGGTATCTTAA 1837421 28 100.0 32 ............................ AAGAAAAGGCGAATGGCAGACCTATCAGTACC 1837481 28 100.0 32 ............................ TGCAAACTTGCTAGGTAAAATGGATCTAAATC 1837541 28 100.0 32 ............................ AATCTCTAGGAGTTTACAAGTCTGATTAATTG 1837601 28 100.0 32 ............................ CTAGTGCAGAATCAATTAGAAAGTCACACTTT 1837661 28 100.0 32 ............................ TACATCTATTGCATCAAGCTCAACATTACCCG 1837721 28 100.0 32 ............................ TTTAATGCAGGGGAAGGGTCGTATTCAGCTCT 1837781 28 96.4 32 ............G............... AACACTGGAACGCAAGGTTCGTCGTTGTGAAA 1837841 28 92.9 32 ............G...........A... CTGAAATAAACTTTTAAGATGTGGTTTATTCC 1837901 28 82.1 0 ...GC......C.............G.G | ========== ====== ====== ====== ============================ ================================ ================== 15 28 96.9 32 GTTCGTCATCGTATAGATGATTTAGAAA # Left flank : AGTAGCTTGCTTAGAATTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTATGTTTGTCATCGTATAGATGATTTAGAAATGTAACGGTGCAACTTACTGCAAACGTCCTCC # Right flank : GTTGTTGTTTATTAATGCATGATAAGTGGATGAGATCTACCATTGCTGTACTTTGATTTTCCTATATCTGTGATAGAACTCTAAATTATATTTTTATCAAAAAAATTAATTTAATTGAAAGAAATAGGGAGCCACAGCTCCCTTATTCACGACTAGCTAACTTAGCTTCAATCCATTCATTAATTTCCCAAGCAGACCACCCTATACGTTTTTGAGAGATCGAGACTTTCTTTGGAAACGTTGGATCAAAATAAGGGGAATTTTCATCCATCATTTCATATATTGTTGAACGGCTAACACCAACAAATAATACAACTTGATGTATATTAATTATTTGATTCATCTGAAAAGTTTGACCTGTGATCGACGCATTCATGATGTTTTCTCCTAATCATTGATGCGAGCGCGTAATCGCTCAGATGATAGGCCAGTCCAGTAAAATTTTACGCAGTCCAATGTTGTCCAAGCTCTTCTAGTTCAATGCTTGAACCGACTGCTGC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGTATAGATGATTTAGAAA # Alternate repeat : GTTTGTCATCGTATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGTATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //