Array 1 217991-216103 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVCX01000005.1 Shewanella algae strain JFC3 scaffold00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 217990 28 100.0 32 ............................ CTATTCACCATTCTGGCGCTTGATCACCGCGA 217930 28 100.0 32 ............................ GAAAAAAACCAGTTGCCATCGAAGCTATACAG 217870 28 100.0 32 ............................ ATAAGCGCGGCTGCTTCGTCGAATGTCGGGTA 217810 28 100.0 32 ............................ ATTAACAGAGTATGAGAGAGAGTTTACAAGCG 217750 28 100.0 32 ............................ ACACCGAAAGTCAGGAGCTGATTCGGGTTAGT 217690 28 100.0 32 ............................ TAATGCGCCGCCTGATGATAGTCACCACAGCC 217630 28 100.0 32 ............................ TTCAACAATATACGTTCCTGTTGACGTGGTAA 217570 28 100.0 32 ............................ TGAACCAGTTCAATGCTCCAGCCGCTGTTGGC 217510 28 100.0 32 ............................ TGTTATCGAATACTGTTTATCTCCTTTGTCGA 217450 28 100.0 32 ............................ TGGCTGCTGAGGTATAGCTGTTAGAGGCCCAT 217390 28 100.0 32 ............................ TTTTTGCTCAAACTCCAGGAACAGATTGAGCA 217330 28 100.0 32 ............................ TGACTGAGCGCATCGCCACGCATAATAGGCTT 217270 28 100.0 32 ............................ CATTCACCGCCGGCAGAATGGCGCTACCGAAG 217210 28 100.0 32 ............................ TTGCTATACCGAAGAAATTGACGACGTTATCG 217150 28 100.0 32 ............................ TTGGTAAGGTGATGCCCCTCATCCATCATCCA 217090 28 100.0 32 ............................ GGGTCGTGAATGGGAAGGAAAAATCCAACACT 217030 28 100.0 32 ............................ ATCAAAAACAAACCAGGGCAAACAATAGTTAC 216970 28 100.0 32 ............................ ATAGAGCGCAAATAACAGGGAAACGGCGCTAA 216910 28 100.0 32 ............................ TACCGGAGAAAATGTCACGGCAATAAATGATT 216850 28 100.0 32 ............................ AATAAGCAAATCCGGAAAAACAGGATCTCCAA 216790 28 100.0 32 ............................ TTACGGTAGCGACGAGTCCAGAGAGATCAAGG 216730 28 100.0 32 ............................ TTATGAACAACGCCTTGTTTATGACCCGACCC 216670 28 100.0 32 ............................ GCCAAGGCGCCGCGCGAAAACCCGCAGCGGTT 216610 28 100.0 32 ............................ ATCCTGTCTTATTAATCATTAATCGACTATCT 216550 28 100.0 32 ............................ TCTTGTTCCAGAGAATCGTTTGCAGAGGCGCT 216490 28 100.0 32 ............................ AGTACAATGGGGCTGGCCAGAATGTTGAAGAT 216430 28 100.0 32 ............................ GGCAACGGTCAGCACCTGGCACTGGCCTCGAT 216370 28 96.4 32 .............A.............. ATCTGCAACCGGCCTACGGCGGTAAGAGACAA 216310 28 100.0 32 ............................ TTTAGCCGTATTCCCAACGCTGTCCATGTTGT 216250 28 96.4 32 .......A.................... ATTCAAAGGCACTGCGCCCGCGGTATACCCTA 216190 28 100.0 32 ............................ TAGAATAGCGAGAACCGTTAGAAACGTGTTTG 216130 28 89.3 0 .........T..T........G...... | ========== ====== ====== ====== ============================ ================================ ================== 32 28 99.4 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGCAAAAAGCAAACCGACAGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCGGCAAAGTACACCTGTGGATGGGCTGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGAACTTTTAAGCACCAAAGGATGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GGTCTTCTGGTGAATTACCCTTGAGCCTTGCCGTGCTCCCTCCACAACGGGGGATTTATCACTCGGCCCCAGCAGTATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTTTCGTCGCTGACCGACAGTTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGTGGCATCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGAGAGCGAATAAGCGGGGCCGAGTTGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //