Array 1 32468-30058 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFKL01000035.1 Mycoplasma hyosynoviae strain NPL1 contig0036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 32467 36 100.0 30 .................................... TCATACCAGGATTATAATCAATAGCGTTAA 32401 36 100.0 30 .................................... TCATAGCAGGATTATAATCAATAGCACTAG 32335 36 100.0 30 .................................... TCAATACTACTAAATACGATTCACAACCAT 32269 36 100.0 30 .................................... TCATAGCAGGATTATAATCAATAGCATTGG 32203 36 100.0 30 .................................... AGTATTTCAAATTTTTAAAAGTATATCTTT 32137 36 100.0 30 .................................... TTAATTGAGAAGAAGTTCTATCATAGTTAT 32071 36 100.0 30 .................................... GAACCAAGCTCCGTACTAACCAAATATTTA 32005 36 100.0 30 .................................... TATTTTTCTAATTAAAAGCTGCAACAAATA 31939 36 100.0 30 .................................... TTCTAAATCATAACACAACAAAGAATAAAA 31873 36 100.0 30 .................................... TTGATAATGTATGTTTTTTCAATCTTGTTA 31807 36 100.0 30 .................................... AATTATAAATATCATTAAAAAGTGAATCAA 31741 36 100.0 30 .................................... ATAATAAATTTATTAATAATACTTCAACTT 31675 36 100.0 30 .................................... TTTTAATAGTTTTTATAATACTGTTACTCC 31609 36 100.0 30 .................................... TTATCAATTTCAAAAGGTGTTTTCTCTTGT 31543 36 100.0 30 .................................... GTATTGTGTATTGTAATTATATCTACTTGT 31477 36 100.0 30 .................................... GAGCTTTAGCGTCTTCCAACTGCTTATAAA 31411 36 100.0 30 .................................... ATATAAGTGATTTAATTGATAGTTTATCTT 31345 36 100.0 30 .................................... TTACGCCAATTTATTGAAATACACTTTATC 31279 36 100.0 30 .................................... GAATAGATAGAGCAATATATTTCCAAAACT 31213 36 100.0 30 .................................... TTTTATCCCATAAACTTCCGAGTTTATATA 31147 36 100.0 30 .................................... AAAAGAATATTTCATATATGCGTTTATCTG 31081 36 100.0 30 .................................... TCTTGTAATGCATATATTTCTTCCAATTCA 31015 36 100.0 30 .................................... TAAAAATAACTTTATTCTTAACCCTTATAC 30949 36 100.0 30 .................................... TTCACCTTGAAGACGTTGAATTAGTTTATC 30883 36 100.0 30 .................................... TTGATCCATTTAAGTTTTCTATTGGACTAG 30817 36 100.0 30 .................................... AAAATGATTTGGTATTAGAAAATATTGATA 30751 36 100.0 30 .................................... AAAATGATTTGGTATTAGAAAATATTGATA 30685 36 100.0 30 .................................... TGAAATCACTAAAACCAATTAGTTGAACAC 30619 36 100.0 30 .................................... AATTTATGGTCGAACTTTTAAAAATGAAGG 30553 36 100.0 30 .................................... TTGCGGTGCCTTATAGGTTAATTCAAAATC 30487 36 100.0 30 .................................... CATATTCACTTATTAAAATATCTTTATTAT 30421 36 100.0 30 .................................... TAAAACCAAAAGAATTCACACCATTTAAAT 30355 36 100.0 30 .................................... TTAACCCTCTTTATTTGTCTATGGATAGTA 30289 36 100.0 30 .................................... CATAATTACCATTAGGTTCTTCTAATTTAA 30223 36 97.2 30 ................T................... TAAATACCTATGAAAATGCTAATTATTTTG 30157 36 100.0 29 .................................... TCATAATTTTTATTGTAAAGGCCGCACCA 30092 35 83.3 0 ...................C....AC...A.-...A | ========== ====== ====== ====== ==================================== ============================== ================== 37 36 99.5 30 ATTTTATTGTCGTACAATTTTTTAGTAATCTATAAC # Left flank : CTATTATTAAACACGAAACCTTAAATGCCATACAAGAAAGCTTAAACAGCTTTTTGGGTTTAAACTATGTGAGTATTGATATTGATTTTTCAAAAATGTATAAATTGTTATTTTCTTTAGATGATGATTTTTTTATTACCAAAGAAGTTTTTTATAAATGATTGGATTCTATAAATTCTAAAACTAAAATGACTATTATTATTTCTAATTGACCTGATATTCAGGTGCAAGAATTATTAAAGTATACTAATGCTTTTAACTTTATTATTATTACTAATGAAATTTTTAATACTTGTAAGTCTTTTGAAGAATTGGAATTATCGTTTATATTTAAAAACAATCAAACACTACATCATATTTATAGCAAAACACCTATAGAAACTTGAATCGAAAATCAATACCAAATAAATGAAAACGAATTTTTTGAATTAAAAAATAATAGAGAACAATGAAACAAATGTATATTTGATATAAAAAATAAACTTTTTTAATAAAATGAC # Right flank : ATCATTTTAAATTATTTAAAAAATGCAAGCTCTTATTAAAATTTAAAGTTTGCATTTTATATTATTTTATTTCTTTTTTATATTTAAAATTCTTCCTAAATTATTTATATTTATTGGTCTAAATATTTTTAAAAATTCACCTATAGATAATTTATTTCTTTTTTTCTCAGATTTGTCATTTTTTTCAATCAAAACATTTTTGTCAATAAAATTATATTCAATACTATTATTAGTATCACCAACTCCATTTATATAAACTATTTGATGATCATCATTAATTCACTTGTCTCCAATTAAAATAACTTGTTCTATATTGGCATTAACATCTATGTTTTTAAAAGCTTTTATTTTTCTTAAATTGTCTTCAAAATAGTTGCTTTCATCATATCAATCAATTTTTTTATCTTGAAATTTAATGATTTTTGCATTTATAGCAACTTCTTTAAAAATTTTCTTTTTACTTTTATCTTTGTATACCAATGCTCCAAATGGTTTAAATG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTATTGTCGTACAATTTTTTAGTAATCTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //