Array 1 25944-33712 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVUR010000047.1 Delftia sp. S65 NODE_47_length_46362_cov_34.991233, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 25944 32 100.0 35 ................................ CACTTGGTTTCGAGGTGTTCCATGCTATGGAGCGA 26011 32 100.0 35 ................................ CTCCCGAGAATCTGGGTGCTTTTCTGGACCTGCCA 26078 32 100.0 35 ................................ TCGCATTCGCTTTTGTCGTCTTTATCATCCTTGGG 26145 32 100.0 34 ................................ TTCCAACGGGCAGCCGCCCAACCTACCACCCAGG 26211 32 100.0 35 ................................ TGCGCAGCCATGGCGGCGGTGGTGCGCTCCATGTC 26278 32 100.0 33 ................................ ATGAAAACGATACCGGCAGCAACACGCGCAGCC 26343 32 100.0 34 ................................ GCTCTCCAGTGTAGCCAGCAGCCACTTGCCGTAG 26409 32 100.0 35 ................................ TTTGCCGGTGGCGCGAACATCGACTACGCGCTCAA 26476 32 100.0 35 ................................ AGCTCCTGCTTGATCGGCGTGAGGTGCCGCTGCAG 26543 32 100.0 34 ................................ AGTGAGACTGCGGATACCAGCACCCACAGTCTTG 26609 32 100.0 36 ................................ ATTGGTATGCGGCCAATGGAGGGGCGATTGTATGTG 26677 32 100.0 34 ................................ CCCGCGCCGACATTGCGGATGTGCCACTCCCCGT 26743 32 100.0 33 ................................ ATCAGGCCCCAGATGACGACACCAGCGGCCATG 26808 32 100.0 35 ................................ CGCAGCCATGGCGCCAGTGGCAGCAGTGGCCAGGA 26875 32 100.0 34 ................................ TGGGCCAGCCTGGCCAAGTTCGACCAGTTCGGGC 26941 32 100.0 34 ................................ TCCTGTCCTGCCTGCACGTGCCTTCCTGCCTGCC 27007 32 100.0 33 ................................ ATGCAGAGGGTGCGCACAGCGTTATGTGCGCTC 27072 32 100.0 35 ................................ GCATTGCCGAGGTCCAGCATGCGCGCGCTGGCAGC 27139 32 100.0 35 ................................ GCTCCGGTGCCAACTGTTGAGACCCTGTTCCCCAC 27206 32 100.0 34 ................................ ATCGCGCGCAGGGCGCCCGTGTCGCCAACCGGTG 27272 32 100.0 34 ................................ CGTAACGCTGTTGTGTGGACCGAATCCGCGCTGC 27338 32 100.0 34 ................................ ACCACGGCAGGGCCCTTCATGACCAGGGCGATGC 27404 32 100.0 31 ................................ TGCAACATGGCGACGTGGCGGCAGCTGGGGT 27467 32 100.0 34 ................................ CCCCAGCTATCGAGCTGGGTCTTGTTGGCTCGCC 27533 32 100.0 33 ................................ CCGCGATTGTCGCTGGTGCCATCAGCACGGCAC 27598 32 100.0 34 ................................ CCGGTGTGCCTGGTTTGTCGCTGCCGTGTCGTTG 27664 32 100.0 33 ................................ GTCATCGAAGACCTGGGCAAGGCCGTGCTGATC 27729 32 100.0 36 ................................ ACCGACAAGCAGGGGCCAGTGGTTGTCCAGATCCGG 27797 32 100.0 33 ................................ GCCGTGCGATGGAGAAGGCCGGAACCTTGGGCA 27862 32 100.0 33 ................................ GCCTTGCGCTCCGCGATCACAGCAGCCGAGGGC 27927 32 100.0 35 ................................ AGATGCTCCTTTATGCCGCCGATGCCGTGCCGCTG 27994 32 100.0 33 ................................ ACCGCTACGGGCCTTTTTCATTGGCCTGCGGGC 28059 32 100.0 34 ................................ TCCGTGAAGTTCGGCCTTGACCCGGACCTGCAGC 28125 32 100.0 35 ................................ GACAGGAGTTCACACGCGATGCCGCCATGCTGGGC 28192 32 100.0 33 ................................ GCAAATCCGCACTGCATATGTGCGCAGCAAAGC 28257 32 100.0 35 ................................ AGCGCGTCCATTTCGTCCATCTTTCGGATTGCCCA 28324 32 100.0 34 ................................ AGTGAGCAGCGCATCGACCTTGGCACGGGTCTCC 28390 32 100.0 34 ................................ TTCCTTGGCCGAGCTTTCGCACGCCCGCGCCAGC 28456 32 100.0 34 ................................ CACTCCTTCACCGCGTGAGCGTTGGGAAGCCAGT 28522 32 100.0 35 ................................ TGCCCTGGTGGCATCGCGCACGACTGCTGCGCATG 28589 32 100.0 34 ................................ ATCTATCCCTAGCCCGCTGCACGCTCCGTCGCGT 28655 32 100.0 34 ................................ GGCTGAGGAGCTTGCGGAGCTGCAGCGTCAGCGC 28721 32 100.0 34 ................................ AACCCCAGCACGAACGGGATCTCGGCATTGGCGT 28787 32 100.0 35 ................................ GTTTGCAGGCACCGCATTATTCCCGGTCGCGCCCG 28854 32 100.0 33 ................................ GCATTGGGCATCCTCCATAGGGTTCAGCGGCAC 28919 32 100.0 33 ................................ TTCCCACTGGACACGCCCGTGCTCGTCACAGAC 28984 32 100.0 34 ................................ TGGCAGCTCGGCCACGTCGCGCGCGCTCAAGACC 29050 32 100.0 34 ................................ CCGCTGATCCCGCAAAGGAGGCCACCCCATGCCC 29116 32 100.0 33 ................................ GGCGGCCTCGATGTGGGCAGGAATGATGATGGC 29181 32 100.0 34 ................................ GGCGGCAATCGCTCCACTGTCGGGGCGATAGGCG 29247 32 100.0 34 ................................ GTCGCCATCGTCGGCCAGCCACTTGTCGCGGATG 29313 32 100.0 34 ................................ CAGACCACCAGGGTATCGCCCTGCACAAGACTGG 29379 32 100.0 36 ................................ ACATTTCAAGTGCTCGGCGCGGTGGCTCAGTTGGAG 29447 32 100.0 34 ................................ AGCTCGCCACGGTAGTCGCAGTCGATGATGCCCA 29513 32 100.0 35 ................................ TGCGCATCCCACGCATTGAATTCCGTGGGAACATA 29580 32 100.0 36 ................................ TACGAGTGCTGCGTGCTCAACGAGTGCGGCCGCCTG 29648 32 100.0 33 ................................ AATCCCGCGTGCAGGCACTGCAACGGCCAGGGC 29713 32 100.0 35 ................................ GTCCAGGCGCACCAGGAACCCGGCGTTGAGCGTCT 29780 32 100.0 33 ................................ ATCGAAATCCTGACCACCGTGGTGCGTGAGATT 29845 32 100.0 34 ................................ TCCGACGTCGTCGACCTGCGATACCGCAGCTGCA 29911 32 100.0 33 ................................ ATCCCGCGCCTGAACGCCACCGTCCTGCCCGAC 29976 32 100.0 35 ................................ CCCCAGCGTGCCCAGCGGGCGCACACCGGCTCGTA 30043 32 100.0 33 ................................ CACTCAGACACGCGAGATGAGGGGACTCCTCGT 30108 32 100.0 35 ................................ GCAGACGGTGAGAAGTGGTCAAACCGGTGGACTAA 30175 32 100.0 34 ................................ TTCGATGCCATGTCAATTACAAGCGGTGGCATTG 30241 32 100.0 33 ................................ GCTTGGTGTCGCACGTCGCCGCGGAGCGTGTGC 30306 32 100.0 33 ................................ GTTTGATTCCCGGGACAAATACTGTTGCGCCGC 30371 32 100.0 34 ................................ GATTTCATGGTCCCAGGGCAGGAAGAGCTGGCAG 30437 32 100.0 34 ................................ TTTAGACCAGCCGCTCAGGTGATCTGCAAAAGCG 30503 32 100.0 35 ................................ AATGCCTCTGATCACGGGGGCAATGTGCATTAATG 30570 32 100.0 34 ................................ TCTCGATATGTGAGGGTCAACAGGGTGTCGACAC 30636 32 100.0 34 ................................ AGGTGCCCCCATTGGGACTGGTGGTGGATCCGGG 30702 32 100.0 35 ................................ CTACGCGTTAATACAAACACATTCGCCGGTATTGC 30769 32 100.0 34 ................................ GTCGTCGCGGTGTGGCGCGCGCTTGTCGTGCCAG 30835 32 100.0 33 ................................ TACATCATCGTCGCGGCCCCGAGCGGCAGCCGC 30900 32 100.0 34 ................................ GATGAACCCAACTGGGAGACAGGGAAGAATGTGT 30966 32 100.0 35 ................................ GTCTTGGTGCTGGTCTTGAAGACCCCAAGCACCAC 31033 32 100.0 33 ................................ GCCCATGGCGCCCCAGGACGAGGCCCAGGCCCG 31098 32 100.0 34 ................................ GTTTCTGGCCTGCGGGCCGCAAGGAGGCCTCATG 31164 32 100.0 33 ................................ GTCTGGATCCCGGTTGCCGCCGAGACCAGACTC 31229 32 100.0 32 ................................ TACGCAAACGCGGACTTCGGACCGGCTGACAG 31293 32 100.0 34 ................................ GGGTGCTCGATGACGCCACCCCAGTTGCGCACAG 31359 32 100.0 34 ................................ AGCGTCTTGACGCTGCCCGTCTTGGTGCCCGCCA 31425 32 100.0 35 ................................ CGAGTCTTCCCGGCATCAATGACGTTGCCGGATAC 31492 32 100.0 36 ................................ TGCTGCCCGACCGTGTGGGCTGGGGAGGCTAAAGAT 31560 32 100.0 30 ................................ TTACGGTAGCTTGTCTGTGCTGCACATGAC 31622 32 100.0 34 ................................ GGAGAGTGGGTGCTCCAGCGTGCTGACCTTCGCA 31688 32 100.0 34 ................................ AAAAAATATCCAAGTGCCACCAAAGTCGAATGCC 31754 32 100.0 35 ................................ TCTTCTTCCGGGGCCACGACATGCGATCCCACGGT 31821 32 100.0 34 ................................ CAGCGGCACCGATGCGGACGCCATCCGCGCCGAT 31887 32 100.0 35 ................................ TCCAGGAACGGGCCGAGCGATGCGATGATCTTTTG 31954 32 100.0 33 ................................ GACTTCTCGATCAGCACCCTGTATTACGTCCCG 32019 32 96.9 33 ..............................C. CTCCATGGACTTGGTCATGCGCTCGCGGATGAC 32084 32 100.0 33 ................................ ACCTGGGCCCTGGCTGTCACGTCCAATGGCCTG 32149 32 100.0 33 ................................ GTGCACGGCGCGGCGGTAGTGCAAGAGCTTGGC 32214 32 100.0 35 ................................ ATATACACGCGAACAGGATATTGGGATGCGTTTAT 32281 32 100.0 35 ................................ GGATCGAGGTCCCAGATGATGTGTGGGCTGCGCGA 32348 32 100.0 33 ................................ TTCTTCACAGCGTTCCTCCAGCAGAAGCGGCAA 32413 32 100.0 36 ................................ ATCCTTGCGCAGGGTGAAGTCGATCATTGGCGCCCG 32481 32 100.0 33 ................................ AGCTTGCACGCGATCTTGTGGGGCTGGTCCAGG 32546 32 100.0 35 ................................ TTCGGAGGGAGGGCTGACGCATGAAGATCGGTGTC 32613 32 100.0 36 ................................ CTCGCTTTCGCGGGCGCTGCCGGCAAGTCCATTGCT 32681 32 100.0 34 ................................ CGCAGGCAGTGCTTGCATGTCACCTTGTCCTTGT 32747 32 100.0 35 ................................ TGAACAGGCCCGATACCTGCTCAAGTGCGTCGCCA 32814 32 100.0 35 ................................ ACCCGCTTTCCCGTCGAATATCAGGCGGGCCTCAT 32881 32 100.0 34 ................................ AACGAGAGGACCACCCGAGACAGGACGAAGGCCA 32947 32 100.0 34 ................................ CCCGCCTCGTATCTCATGGCGTTGTCCCCCAGAA 33013 32 100.0 36 ................................ CGTGCATGCCCCAGCCGGGGCGTGCGTTGCTGACGA 33081 32 100.0 33 ................................ TGCCTGCTGGCCTGGGCCAAGCGGCACGAGCAG 33146 32 100.0 34 ................................ TTCCGCATCAGCCGCTGGCAGCTGCAGGTCGGGC 33212 32 100.0 33 ................................ AGCATGACCCCTGCAGGCATGCAGAAGTGGTTG 33277 32 100.0 35 ................................ TTCAGGGGTGTATCGACGCGTAGGGTTAGCATCAC 33344 32 100.0 36 ................................ AAGGAATGGGTCCGTCGCATGAAACGTGCGCTCGGC 33412 32 96.9 34 .........G...................... ATGGGGCAGGGGGCCTGGATGAGCCTGGCCGTGG 33478 32 100.0 36 ................................ GATAAGGAGGCCTGTGCCTTCGGGCTGGAGCGCCTG 33546 32 96.9 35 ............A................... AAGCAGGAGAGGGAGGTTGCCAACGACTGGCATTC 33613 32 100.0 36 ................................ CGCGCCAGCCAGGGCATCACCAAGGCCCTGACGCTC 33681 32 96.9 0 ................C............... | ========== ====== ====== ====== ================================ ==================================== ================== 118 32 99.9 34 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : CCGGCGATGAGAAATGAGGTGTGCCGATGATGGTCCTGGTGAGCTATGACGTCCGTACCCAGGACCCGGATGGTGCCCGCCGCCTGCGGCGCATCGCCAAGGCCTGCCGGGACTTCGGCCAGCGCGCGCAATACTCCGTCTTCGAAATAGAAGTGGACGCCGCGCAATGGGTCGCCCTCAAGGCGCGGCTGATGCAAATCATCGACCCCGCCCAGGACAGCCTCAGGTTCTACTACCTGGGCCAACACTGGCGCAGCAAGGTCGAACACATAGGCGCAAAGCCCGTGCTGGACCTCGACGCCCCCCTCGTCTTCTGAGCCTCCGCGCGAACCCCAAGTGACCGCCGCCTGCCCTTGAGGTTCGCAGCCGCGCAAGCTGTTGTTTTCAAAAGGGGGTGGGCGAGCGAATGGCTGAACGCCGATCCTGCAGCATGACAGCGCCGTATGGTTCGCGGAAGCCTGGCTTTTTTCATAGCGGTGAAATTGCTCTATAAGTACCCC # Right flank : CCCCTGCCGCCACAGCAAGCGCCCCACGCATTTGAAACGAAGCGCCTGACTCATTCCTCGCCGCGCAGACCGCTATTGAGAGAGAGCCCACCCACTGCCTGCAGCAGGTACCCGCGTGCCTCATCCAGCGAGGGACCTGCATGCCCATCGATCCGCCGGATATAGGGAGATGTGAGCACAGCCATGGCATTGCCATCAGGCCCGAGGATGGGGCAGGAGATGTCCACCACGCCATAGGACTGCAGGCTTTCGCTCTGCCTGTAGCCCGTGCTGCGTATCTGTTCCAGCATGTCGTGCAGCTGTGCCTCGGGCAGATGTACCTCGCCTTCCAAAGGCGTGTGCTCGGCCAGCATCTGCGTGCGGCGTTCGGGTGTCTGGCAGGCCAGCAGCACATGGCCTGACCCGGTGTCCAGCAGCCCGACGCGTGCGCCCAGCCTGATTGACAGGCCCCAGTTCCCGGGGCCGGGGACCTGGGCCACGATCAGGACATTGCCACGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //