Array 1 4331404-4330113 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP030174.1 Klebsiella pneumoniae subsp. pneumoniae strain 11219 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4331403 29 100.0 32 ............................. GCTGGATTACATGGTGTAGAAACTATTGAGCT 4331342 29 100.0 32 ............................. CCTCTAAGGTCATTTGGGGTTACATCCTCAAT 4331281 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 4331220 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 4331159 29 100.0 32 ............................. GACGTAAACGAATTATTTAATCTTGACAGTTA 4331098 29 100.0 32 ............................. CGATTGTCGGTGGTTGTCTGCTGGTATCTGCT 4331037 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 4330975 29 100.0 32 ............................. CTCGAAAACGAACAGCCCGTAAACCATCATCA 4330914 29 100.0 32 ............................. ATCCATATTTTTGAACCGTCAGAGCCAGGCCA 4330853 29 100.0 32 ............................. ATCCATATTTTTGAACCGTCAGAGCCAGGCCA 4330792 29 100.0 32 ............................. CCCGTAAAGAACGCCAGAATCGGCATCTTTTA 4330731 29 100.0 32 ............................. CGACGATTATCTCGTCGTCTGGAGTGTCTGCC 4330670 29 100.0 32 ............................. GGTTACTCCTTATATTATTTGTGTCGTTGTGA 4330609 29 100.0 32 ............................. TTCGCCAGCCATTCGTCCTCGGCCTCAGGCGA 4330548 29 100.0 32 ............................. GTCACGAAGGAGGGGGCCGAGGGAGCAGTGAT 4330487 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 4330426 29 100.0 32 ............................. TCGTAAAAGTCGGCGACGTCACCCTCTGCCAG 4330365 29 69.0 12 .................AACTT.TCG.A. GTTGGTGAAATT Deletion [4330325] 4330324 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 4330263 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 4330202 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 4330141 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 22 29 97.5 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TAATTACTCTGTGGATGCCCTTAACCACTGGCCATCACGGGCGTCCGCCGGTGGGGATGCGCGCTCTGGATAATTTCCATCCATCCGATATTAAAGCAGCGCATGACTTTCTGTTAGCTATTAAATCGCTATTCCCGGACATGGAAATCCCGTCCTTTTGGGATGATGATGCAGGTGTGGAGCTGTTCAGTCACCTGTCGTGGTTTATTTCGGCTGCGGTGGTACTGGCTGACTGGACGGGCTCATCGACCCGCTTTTTTCCCCGGGTCTCCCAACGAATGCAGCTTGATGTCTACTGGCGGCAGGCAAACGCGCAGGCAGAGCAGGCAGTGAATGTTTTTCCTCCTGCTGCGGCTGTTGCACCATTTACGGGAATAGAGACATTGTTTCCTTTTATCCAGCATCCTACGCCGCTCCAGAAGGCGGTGCTTGAGCTGGATATCAGCCAGCCTGGACCGCAGCTGTTTATCCTTGAAGATGTTACCGGAGCAGGCAAAACG # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCACCATCTCATAGCCTGTCAATTT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //