Array 1 442508-445280 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLEW010000002.1 Clostridium perfringens strain GY-1 NODE_2_length_859433_cov_262.805734, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 442508 29 100.0 36 ............................. ATGTCATATCACATACGTAGAAAGCATCAAATTTCA 442573 29 100.0 36 ............................. TTTATAAGTACATGGCTTCTTTTCCAACCAGTAACA 442638 29 100.0 36 ............................. TTTGTTTGTTTCAAAAACATCAAAAACTAATTCACT 442703 29 100.0 37 ............................. TAAGCATTATTTACTGTTTTAAAATTACCAGTAAAAC 442769 29 100.0 37 ............................. CCAATCATTGATTGTTTTCTCAATTTTACCCCTCCAT 442835 29 100.0 36 ............................. TTTAATTTATTTGAAATATTTTTCTATTAATATATT 442900 29 100.0 37 ............................. TTTTTAAAACTTTGATAAAATCATCAATATTAAGTTT 442966 29 100.0 36 ............................. AATAATCATCGTTATTAGCTATTTCATATGCTTTAA 443031 29 100.0 36 ............................. TAGCCTGTCCAATTATTAGTTTTTCTCATTCTTCTT 443096 29 100.0 36 ............................. AAATATAGTCGTTTCTTTAGTGTTGCACCTGATTAT 443161 29 100.0 36 ............................. TTTTATAAAATCAATTATTTTCACAATTAACACCTC 443226 29 100.0 36 ............................. CTATTTGCCCCTTTTTATACTTCACTTTATTATACC 443291 29 100.0 37 ............................. GTAATAATAACTTCTCTTTCAAAATTTAACATAATAA 443357 29 100.0 36 ............................. TACTGTATTGTTGCTTCTTAAGGTCAGATACCTCAT 443422 29 100.0 37 ............................. TTGAATCAAATGACATATAAAATAGATATAGAGAAAA 443488 29 100.0 36 ............................. TATATTTACGATAAATATGATTTAAGTCATGTTATA 443553 29 100.0 36 ............................. TTTCAGCAATGGGAATGGGTTGGGCTAATGGTATTA 443618 29 100.0 36 ............................. TTACTCTTCGCAAGTTCTTCCAAAGCTTCTTTCTGC 443683 29 100.0 37 ............................. ATAGCTAAACCTAAAACTATACCTTGAGCAACATAAG 443749 29 100.0 37 ............................. ATAAATAAATATTATAACCAACAAGGGGGGGAAGGCA 443815 29 100.0 36 ............................. ATCTTTTCGAGCAAATTCACGTGGATTAAAAAAAGT 443880 29 100.0 36 ............................. TTATTTTATTTTTATCTGAATTTAAAGTTTTCTTTC 443945 29 100.0 36 ............................. TTTTTGAGAATATCTTTTATAGCTTTGCAGTGATCC 444010 29 100.0 36 ............................. GGTATAATATCTAGAATTTTTACTAATATATTGCTT 444075 29 100.0 37 ............................. GGGTAATTTTGATGATGGTTCTTATGCCTATTTAGGA 444141 29 100.0 37 ............................. AGCTCATCACCAACGTATTTTTCAACTTTATTTGTGA 444207 29 100.0 36 ............................. TTAAAGCCTTGTCAACAGGACGAATAACTGTGTTAA 444272 29 100.0 36 ............................. TATCTAAGATTGTAGCTGCGTATTTAATGCCATACT 444337 29 100.0 36 ............................. TATAAAAATATGAGTGAACAATTATATAGAATCTAT 444402 29 96.6 36 ................T............ AGTACCAAAACCAAAACAAAATATAGAAAAAGAAAT 444467 29 100.0 36 ............................. TAGTAACGCTTCGCTCTATCTGCGATGCCACTTTAA 444532 29 100.0 36 ............................. CTTATTAAATGCTCTTTTAGTAGCATATTTAGTTTA 444597 29 100.0 36 ............................. AATGTAAATATGCGTATGAAAGTTAAACCTCGAAAA 444662 29 100.0 36 ............................. GGTTTTTCAGGGTGTAAAACAGAATCTAAATAAACA 444727 29 100.0 36 ............................. TTGTAGGAGACAAAATGATAAACAGACTAATAGAAG 444792 29 100.0 37 ............................. TTGAGTAATAAGCAAGGTTTATATTTGCCTATGCCTA 444858 29 100.0 36 ............................. CAATCTAAATCGGGTTGTTCAACAACTTTGTCTTTA 444923 29 100.0 37 ............................. ATCTTAATAGGATTGTAAGGATTCATTAAATTTAAAT 444989 29 100.0 37 ............................. ATGAATGTCCTAGACATTTAGGATTAAATGATAGTGA 445055 29 96.6 36 ........................G.... GATATAACATTCTATTTGATGTCTTATCCCAAATTC 445120 29 100.0 36 ............................. ACATTAGCTACATGCAATGCTACGCTTGGTGGAGCA 445185 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 445251 29 86.2 0 .................GAA....C.... | T [445278] ========== ====== ====== ====== ============================= ===================================== ================== 43 29 99.5 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTATAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTAAAATTTGGG # Right flank : TATATAAAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATAAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAACATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTGATATATACTTATTAAATTTAGAACTTTGAATCTAATAATCTATGTATTTAGCAGTTTACATCTAATAGCTCCCTTGAAATTTCTTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATTAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //