Array 1 477297-479128 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADEPX010000002.1 Burkholderia gladioli strain BCC1754, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 477297 28 100.0 32 ............................ ATGCTCGACGCCGCTCCCGCCGCCCCGGTCGC 477357 28 100.0 33 ............................ CAAAGATCGTTGCAGGGCGTCGCTGTTTGATGA 477418 28 100.0 32 ............................ TATCGAAGCCGCGAGCGCGGGCGCGGAACACT 477478 28 100.0 32 ............................ GTAGGGCTCGACTTCCTCACCCCAGTTCGTGG 477538 28 100.0 32 ............................ TTCAGTTGCTCGATCATCGCGTTCACCTCGGC 477598 28 100.0 32 ............................ AACTGAAACACGGATTCCAAGGCGTCGGCATT 477658 28 100.0 32 ............................ TTCCGACCGATGCCAGAGCGGGGCAGTACAGG 477718 28 100.0 32 ............................ GTGAGAGCGAATCGCAGTTCGACGGGAGGAAT 477778 28 100.0 32 ............................ TTGGCGTAGGTGCGCTCGCAGACCTTCGCGCA 477838 28 100.0 32 ............................ ATGCCGGCAATGCAGATATGTCGATACCTGAC 477898 28 100.0 33 ............................ CTTTCGACCGAGGCTAAACCGGGTTCCCTCCGC 477959 28 100.0 32 ............................ AAGGCGCGCGAGCTCGGCAATACGCAACCGGG 478019 28 100.0 32 ............................ GTCGTCCATGCGTTGTGCGTGCGCTTCATCAG 478079 28 100.0 32 ............................ GATGGGCGCCCAGCGTCAGCGATGGATGGGCG 478139 28 100.0 32 ............................ CGGCAGGCGGTCGGTGCCATCGGCTCGGTGCC 478199 28 96.4 33 ...T........................ TCATCAAGGTCGCATCCAACACCTGGGTTCTTC 478260 28 96.4 32 ..................G......... TTGCTCACCGCAGCGGTATCCGTACCCGACAT 478320 28 100.0 32 ............................ GCGTCTTTTTCACGGTTCCATCGAAAGCCGCG 478380 28 100.0 32 ............................ AGGAATGGGGCGGCACTTACCGAGGTGGCGAA 478440 28 100.0 32 ............................ AGTAGAAATCGGTCGGCACCGCGTTCGCGAGA 478500 28 100.0 32 ............................ TCACGATGATGCGCGATGCGCTGACCATCTTC 478560 28 100.0 32 ............................ GTCGGGGCATTCGACGTATTGGCAACCGTCGA 478620 28 100.0 32 ............................ CGGCGGCGGCATGAAGAAGATCCGACGCTTGC 478680 28 100.0 32 ............................ TGCGGCCGGCCGTGAATTTTCGCGACGACGGC 478740 28 100.0 32 ............................ TTGCACGACGTAGAGGCCGATCGAGATCGCCG 478800 28 100.0 32 ............................ ACAATCCGAGGGTGCCGTTCTCGTCGTCGTCC 478860 28 100.0 32 ............................ TTGCGCGTCAGGTCGCCCGTGGTCGCCGCGGC 478920 28 100.0 32 ............................ TGCATGGCATCCATCGCGGCCGCAAGCTCGCG 478980 28 100.0 32 ............................ GATCGTTCAGCGTCGGCGATCCGGCGCGCGCT 479040 28 100.0 32 ............................ GGCACTGCTGCTCGCGGGGAGGTGAGAGGTGC 479100 28 92.9 0 ...........A.C.............. | T [479124] ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.5 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTTTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGCCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGGCAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGAGGGAAGGGGCTA # Right flank : ACTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACCGGCTCGAATACCGGGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACAGGCAGCGACACAAACCAGACAGAAAACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAATACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //