Array 1 181779-181932 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJFK01000009.1 Clostridium sporogenes strain UC9000 contig_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================== ============================================== ================== 181779 21 100.0 45 ..................... ACAAAAAGAGATATTCAAAAGTCAATAGATGAAATTGTTGAACAG 181845 21 95.2 46 .....C............... GTTTCAAGGGATTCAAAAGCTTCTGATATTTCTATTTGTTGAACCT 181912 21 90.5 0 ...................GC | ========== ====== ====== ====== ===================== ============================================== ================== 3 21 95.2 46 TAACATAGGATGTATTTAAAT # Left flank : TTATGGCTAATTTCGCAGAATCGTTAGGTATTCCAAATAGTTGTTTGATTAAAGAGAATAAATCAAGAAACACATATCAAAATATACAAAATTCAATAAAAATAATGGAAGATAAAAATTGGTCATCAGCAATGGTAGTAACTTCTCCCTGGCATTTAAGACGTTCTAACTATTTTTTAGCAAAATTTAATATTACATGTCAAATGGAGAAATCTGACTATCCAAGAGAATTTTCTTATCTTTATATTATTGCTATATATATGTGGGAAAATTATGTAATGACCAAAACTAAAATAAAAAGACACTAATACTATTTTTCCAGGTGAAATAAACTTACAAACTTATTCAAGCTATTGAAACATAAGGGATAGAATAGTTTTTTATTATGCGTTTATGAAAAAACAAAATCACTTGGAAAATTATCTATAAAACCTTGTAAAATCAATAGTTGTATGATATTCTTAAAAACAAAGAATGGCTATTTTACTATGGTTGAACAG # Right flank : CAGGGAATCCAAATTTGTAATTTGGTGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAAATAATAATTAGACATTTAGTATTTTAAGTTTAGATATGATATGAAAAGGTCAACAATAACATGAGAAGTATATTTTTAGAATAATATATGAAAAATGAGTAAAAATAAAAACAAGGTTCAAAAACTTTTTCCAAGCAATTTTAACTTTAAAACCTATCTTAAGCATTGAAATATAATGCTTAAGATAGGTTTTTGTTTTGTAAATACTGTTTTATGTTATTATTTATCTAATTCATCTAGAGACATTAGTTTTAATAATCCATTTCGTAATAAAATTAGAATTACACCAAATACTATTACAATGCCAGATATTAAGCCAAATATTTGAGTATATCCTAAAGTATCTGTAAATCCTGCAAGTTTTCCTGAAATTATGCTTGAAAAGAAGAAGCTTAAGTACCATGCACCCATTGCTAGGGAGCCGTATTT # Questionable array : NO Score: 4.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:-0.5, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.95%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 36946-35533 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJFK01000008.1 Clostridium sporogenes strain UC9000 contig_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 36945 24 100.0 44 ........................ GAAATTTTTTTAAATTACCTGTTTCTTCTCCTATTCCTTTAGAG 36877 24 100.0 43 ........................ GAAATCTCGAATTGCAAAGTTCTATAATGTAAGGGTCTTGTCT 36810 24 100.0 41 ........................ GAAATCGTAATATATAGAAGTGAATGTAGAGCATTAATTAG 36745 24 100.0 41 ........................ GAAATATAAAGGTGTAAAATTTAACTCGATTAATAAGCTAG 36680 24 100.0 42 ........................ GAAATTCATTTGAACTCGTTTTTATTATATGTTCTAACATTG 36614 24 100.0 45 ........................ GAAATTATTGTTACTAAATACAAAGAGGGTTTATATGGCTAAAGG 36545 24 100.0 43 ........................ GAAATTTGGGCTAAATATTCTACTAATCCGCCTGTTTCGTCGC 36478 24 100.0 43 ........................ GAAATAAACTTCTTCTTTTAGCATTATCTTCTGTTTTATTCCC 36411 24 100.0 43 ........................ GAAATTACACATGCATTTTCTACACATGATATATCCTTCATCG 36344 24 100.0 42 ........................ GAAATATCTCTTAACATTTCCACTTCTGCATCAGTACATTTT 36278 24 100.0 42 ........................ GAAATTTTTAATAACTAATTTCTCTAAAAATAAAATAAGAAG 36212 24 100.0 41 ........................ GAAATCTAACATAGTTATATTTTGGGCTTTCAGCATCTTTA 36147 24 100.0 43 ........................ GAAATCTTTTTAACAATTTCTTATTATGTTTATTAATTTCTTG 36080 24 100.0 42 ........................ GAAATCAAGTTTTCATTTCCAATTCTGTCATGGTTTTTGCCT 36014 24 95.8 42 A....................... GAAATTTTTAAACTTCAAATATATCTTTTATTTCATACTCAC 35948 24 95.8 41 ................G....... GAAAATTACAAGAATTTTTATTTGTTGTAAAATTAAAATAA 35883 24 91.7 43 .........C.....C........ AAAATTTACTTAATTTAGGTTTTATGTTGACCTTACCGGATTT 35816 24 91.7 40 ............T........C.. AGGATATATTAAACATCAACCAATTTTGAGCTTGCACTGT 35752 24 100.0 41 ........................ AAAATAAATTTTCTATGTTCACTATTTTCCCAGCATGTTCA 35687 24 95.8 41 .......................C GAGATATTACATATGTAGCAAATGCTACAGCAACAAAGATT 35622 24 95.8 42 ...............C........ AGAATGCGCTTGCAGCTCTAAGTAAACATTTCTAAGTCTTAC 35556 24 91.7 0 A.............G......... | ========== ====== ====== ====== ======================== ============================================= ================== 22 24 98.1 42 GTTTTATAGTTCCTATAAGGAAGT # Left flank : TAAAGAGTTTTTAATCAGTATAAAGAATAATATAATAGCAAAATACAATTCATTTTATAATGAAGAATATAAAGGAATTTTAAATATAAGTATATTAGATGCAAACAATATAAGAAAGAAAATAGATAAATATAAGAAGTGGATATATGAAGGATATTTAGGTGGTTTTATAATAGAGGGAGATACTGAGATAGTAGAACTTGCTTATAGCTGTGGATTAGGTAGCAAAAATTCTCAAGGCTTTGGATGTATTGAGACATTTAAAGATCTTAATGGTATTAAAAATTATAGCAGAATAGTTTAAATTTAAATATTTTGCAGCGAGCTAACTTTTTTATTATATGTATATAAAGTATTGATTTAACTGAATTTTTTAAAGATTAAGTGGGTTTTATAAAAACATTACTGAAGGTTTACTGCAAAATCCATAGATTTAGGTGATTCTTAACATTGTTAAAAACAAGATGTAGCCTTATTTTATGGTAATTTTGAAATTGGGG # Right flank : TAAGTAATTTTAATAATATTTAATTATTTGTATTATTTTTTATTGGGGGGAAATTTTTAATCTAACATAGTTTAAAATTTACTATAACAAATAAATACTATTAAATCCTTTATAAGTAAGTTTAAAAAGAATTGTTATTTGGTATAATGTATATAAGCGTAATTACTAATTAGTAACCTTAATTGATAATTAAGTATTGAGAATTAAACATATGTTAAGGAGGTGATAATATGGAGTTTGATATTTATACATTAGTAGAAAATGATGAAATAGAGTGTAAAGAGGCTTTAGGTGGATTACCTAAAGATTTATGGGAGACTTATTCAGCTTTCGCCAATTCTAATGGAGGAACACTTTTTTTAGGAATAAAAGAAAAGTCAGCGAAATTCTTTTTTACAGGAGTTAAGGATGAAGAGAACATAATTAAAGATTTATGGGACAATTTAAATAATCCTAAAAAGGTAAGTGCAAACATATTAGGTAATAATTCAATAGAGATT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATAGTTCCTATAAGGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //