Array 1 349459-348891 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP022386.1 Capnocytophaga gingivalis strain H1496 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                              	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	=============================================	==============================	==================
    349458	    45	  93.3	    30	T....................C....T..................	AGGTAAAAGCCTTTATATCGAGATGAAGGT	
    349383	    45	 100.0	    29	.............................................	TTTACGATAAAAAAGGTACAGAGTATTAC 	
    349309	    45	 100.0	    30	.............................................	CCCGCAGGGCGAGGGGGGCGAGATGGTTTG	
    349234	    45	 100.0	    30	.............................................	ATTCCTATTATGAACTCATAAAGGAATTAG	
    349159	    45	 100.0	    30	.............................................	AGACAATAGGTGGAAAAGTAGACCACCCTG	
    349084	    45	 100.0	    29	.............................................	AAGTTCCGTGAGGCTTTTGGTCAAGCTAC 	
    349010	    45	 100.0	    30	.............................................	ATTGCCCTATCCCAACTATCCCGCGGAGTA	
    348935	    45	 100.0	     0	.............................................	|                             	
==========	======	======	======	=============================================	==============================	==================
         8	    45	  99.2	    30	GTTGTGAGTTGCTTTCAAATTTGTAACTTTGTGACCTCAAACAAC	                              	       

# Left flank :   GTAGGGAAGAAGTGGGTTACCGATCTTATCAAGGAAAATGACCCAGAAGATACCTCCTATTACCCTTATATGAATGGACAATTTGTCTTCAAGAATGCTGTGGTACGCTTCTCAGAAGTGATTATGGAGGGGCTTAAGGCTAACAACCTTACCGAAGGGGATATAGATCTATTCATCCCCCACCAAGCCAACTTGCGTATATCCCAGTTTATCCAACAGAAATTCAAACTTTCTGATGCACAGGTATTCAACAATATTCAGAAATATGGGAACACGACAGCAGCGTCTATAGGAATAGCCTTAGCGGAAGCGGTAGAACAAGGACGTGTCAAAGAAAATGATTTGCTCGTCTTAGCTGCTTTTGGTAGTGGTTTTACCTGGGGAAGCGTAGTGATTAGAATGTAGATAGGGAATAGGTAATAAATAGAGCCAATCAAGAATCAAAACATCTATCATCTAACTATGTAAGATACTATGAGTTGTTTCTTACATAGTTTCTT
# Right flank :  CTCAATCTTTTAAAGAGATTGATTTTCTGTAGGTTATTAAAAAAGTTTAAAAAGAAAAAACCTTCTATTTTATTCTATTCTTATGATAAAAGGAAGGTTTTTTGTTTTCTAAAAATTTAGAAAAGAGTGAGCTGGATACAATCTTTAGGCGGATCTTTTTTTGATTGACAATAGAAGATCTCTATTCCTTCAAATTGCTTGTCGGTGATAGTCAGTATAGCTACTTTTCCATAAGGAGGTAACCATTGTTTGACACGTTTGATATGTACCTCAGCATTCTTCTTGCCAAGGGGACATGTCGCTCATCGCAGCTGATAAGGATTACATTATTCTTCATGAGTTCTTGTATTAGCTGGTGAGAGAGGGTGATTTGGTAATGGTCAAGCATCAGTAGCCCTATATCTTCTATAGGGACACTGCCTTTCTCTTCTTTAGTTTCAGGGTCGGTAACCTTTAATTATTTGTCTTTCAGCTTCAAATAAGCAGGATTGCCTATGTAA

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGAGTTGCTTTCAAATTTGTAACTTTGTGACCTCAAACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:64.44%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.50,-5.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.87   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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