Array 1 26015-24527 **** Predicted by CRISPRDetect 2.4 *** >NZ_OABZ01000022.1 Neisseria meningitidis strain Neisseria meningitidis isolate R765, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26014 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 25948 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 25882 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 25816 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 25750 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 25684 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 25618 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 25552 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 25486 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 25420 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25354 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 25288 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 25222 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 25156 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 25090 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 25024 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 24958 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 24892 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 24826 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 24760 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 24694 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 24628 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 24562 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //