Array 1 80808-80443 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFFM01000012.1 Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================== ================== 80807 28 100.0 33 ............................ AAGACGGTCTTGAAATTTTTCATGATGCCGATG 80746 28 96.4 33 .............A.............. GCACAGTCACCAGTGGCGATGGCTTGACCAGCG 80685 28 96.4 33 ................A........... CGCTGTTCCGGCGTTTGCCGTCGATGGTGATGG 80624 28 100.0 126 ............................ GCAGAGAAACGGCGGAATTCCAACGGTCGTTTCTCTGGAAAATGTGTGTTTTTCCGTTGAGCGACAGCAGATTTCCTGTTTTCTCTACTTAAAGAGGCTCCCTGTCATCCCTGTATCCGGCGTACA 80470 28 71.4 0 .GG..........TG.........ATGA | ========== ====== ====== ====== ============================ ============================================================================================================================== ================== 5 28 92.8 56 GATTCAACCCCACGTACGTGGGGACAAG # Left flank : GTTCCTGTACATCATGAGAGGTTCTACCCCCCTGTGACAGGCCCATTTCATCACATAGCTTGTAAATGCTGGGAATGGTAATCGTATGCGTGGATGGGTCGACCGTAGCAGTCTTGGTTTTCCCGGCAGCCCTAATCTGCTTTGCCATCCACGCCATAAGCAGACGAGGATACTTCCCGTAAGGAAACTTACGCTGGCGGTTAGAATCCACGCCGGCTTCCAACAGGTACTCCAAGGTTCCGTTGCTCTTGGCAACGAAATCCACGCCAGGCTTAGGTGGAGATGCAGGGAAAAGCGTCGAGGTCAGAATACTGTGGCCATACCAGATTTCGGCACTGTTCGGTTGCCGGTTGTTGATATCGTTCAACAAGTCAGCCTTGCGCAGATCCAACTCGTTGCCTACGATCTCCGCGTCAAAAGCCTCCTGCGTGGCATCTCCCATGTTTTCGGTCATGAAGATGATTCTATTTTGCCGTCAGGAGATGTGAAAGAGGAGACGT # Right flank : AGCAGAAACCGGATTATAGGATCCACTCAGTCACATCGGTGGAAACTTTCTTTAGACTCGGGAATACTGCCTTATGCTTCAAGTTCAGATCCCGAGGGAGTGTTTTCGTTTATGTGGCCGTATTTTCATTGAAACCTCGTTTTTCGTGTAGTAATTGACAGTATATCACCCTTTTGGAGATATGCAAAATCCGATTCCCTTGTAAGTGTGGCATACTTCAGTCGTTGTTAAACAGCCCTATTGGTTGCTGGGATCCCGGCTTCATCTGCTCGAATACTTACGTATATTCAAGACTTGGTCTTGTCGTGGTACGCCCAGGTAATAGGTGGCGGTCGATGAATGGGGTGATGGAAATGATTGACAAAATATACCCCTAGAGGTATATTTGTGTTATGTTTAAAGTAGAACTTGAACTAATAAAGGACTGGCTGAAGGATCTGGATAAAGACAGTGCCACTCAAGTCTACGCAGCCCTCCGGCTGCTGCAGCAGTACGGGCCG # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCAACCCCACGTACGTGGGGACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.80,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 25079-27892 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFFM01000003.1 Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================================= ================== 25079 28 96.4 36 .......T.................... ATGGCTTTCCAGCTTTTGCGAGCAAGCTTCACGGAT 25143 28 100.0 33 ............................ TCGCCATCCAAGGAATATCCAAGGATTTATCTG 25204 27 89.3 33 ..A..........G..........-... AAGACTCCTTCCATTAGATGCCATTCACACCGG C [25211] 25265 28 96.4 32 .............G.............. ACGGCACGATAAGCCAAGACAAACCAGCCCAG 25325 26 85.7 33 .....-.....-............T..A GCGGCCCGGCACACGTTCGATTTGCTTTCGGTG 25384 28 89.3 33 .............T.G........T... GGCGTAGTCATTACTCAAACGCAAGGCGGCGTG 25445 28 92.9 33 .......T..........G......... ACTCGGAATCCTCCCCGCACAGTTGGAGAACTG 25506 28 100.0 33 ............................ AGTTCCGTCAAGATCGTTGACGACTCTGGCGGA 25567 28 89.3 31 ...............G........T..A GGCGGTTCTCCAGCTGCGTGGGGAAGATTCC G [25591] 25627 28 96.4 33 ...............G............ GCACGCGCCTTCGAGAAGTTGAAGGACGCGGCG 25688 27 92.9 33 ..............-.T........... ACTGGATGGAATGGCGGCAAAGTAGCCACTGTG 25748 28 100.0 33 ............................ TTTGGCGTATCCAACCATTCCTTGCCGTGCTCG 25809 28 100.0 33 ............................ GGTAGTTCAATTCCGCCGCGTAGGTTCCGAGGG 25870 28 100.0 33 ............................ TAATCGTGGAAGATGCGGATACCGAAACTATAG 25931 28 100.0 33 ............................ GACAGCGGGGACACCGCGTGGAACACGACGTAA 25992 28 100.0 35 ............................ TCAACAGCTTGCGCGGAAGAAGTTTGGCGACGGAA 26055 28 100.0 33 ............................ GTCACCGTCGATATTGTCCTTCCCGAACACCCG 26116 28 100.0 33 ............................ CTGTCAATCACAGCGTCGGTCAGGGCGTCGATA 26177 28 100.0 33 ............................ GCTGCAGGCGCTTACAAACGCCCTAGGAGGCAA 26238 28 100.0 33 ............................ ATGAACGCGGACTTCGGCCACCAGGCCGTGCCG 26299 28 96.4 33 ...........C................ TCGCGAAGGGCCAAACCGTGAAGCGGAACCGCG 26360 28 100.0 33 ............................ CGTCAGGCGGCAAACGCTGCGCAAAGCGTATTG 26421 28 96.4 33 ........................T... TTCTGGCCTCCGAATCAGTTCAGAACGAGTTTG 26482 28 89.3 33 .............T......T...T... CATGTGGATGAGCCTGATCTGAAGCTGGTGCGG C,A [26489,26502] 26545 28 92.9 34 .............C..A........... TGTATGGCGATGGCGCGCATACCGTGTTTGCCCG 26607 28 89.3 33 .............T.G........T... TCGAGTTCATTACCGGTGGCATTTCTCTGCCGG 26668 28 96.4 33 ................T........... TTAACGGGTGTGAGAATCTCGCTGACTGTCTTG C [26675] 26730 28 96.4 33 ........................T... GCGGTGTTTTCTTCTACTTGTTTCCAGAACTGG 26791 28 89.3 34 .........A...T.G............ GTGTTGACGGTCTGGAAAGCTGGCCTTAGCCTCG 26853 28 85.7 34 .............GG.A.......T... TAAAACGCCGTGGCAAGACGAGGACTATTGCCCG 26915 28 96.4 33 ........................T... TCTTGGCGCTACCCCATACACCTGCCGTTCGAG C [26922] 26977 28 100.0 33 ............................ TCATGCTCTGGATTTGATCCACGAGTACTTCGG 27038 28 100.0 33 ............................ GAGCACGTTAAGCGGCCTGCCATGAGCCACCCG 27099 28 100.0 33 ............................ TGCGGAGCTCACTTGCTCATGCGGTTTCAAAGG 27160 28 96.4 33 .............G.............. AAGTCAAGGCCACGGCGGACGACGAAGAAGCCA 27221 28 100.0 32 ............................ ATTCGGACGAGGGCTTACGGCGGACACGCCTG 27281 28 100.0 33 ............................ TCAGCAACAAGCGTAGGCATTATTCCTCCTCCG 27342 28 100.0 33 ............................ GGTGCGCTCATCTGCGCCGGCCTCTTCGCCGCG 27403 28 100.0 33 ............................ CGATCGTCAAGAAAGCCGCCAATTCCTCCACAA 27464 28 100.0 33 ............................ GGCGAATCCAAGCCATTGTGCTTGACCTCGATA 27525 28 100.0 33 ............................ AGAACCGCCGATAGCTGAAACATGGAGGGGGCG 27586 28 100.0 33 ............................ TACGACGGTCAAAACCAACGTCGTATGATTCAA 27647 28 100.0 33 ............................ CCGCGCAGGAGAATACCCGCACGCTGTTGAAGG 27708 28 100.0 129 ............................ AGCAGAGAAACGGCGGAATTTCAACGGTCGGTTTTCGGAAAAAGCTTGTTTTTCCGGCGAACGACAGTTGATTTTGGCCGTTTTCTACATAAAGCGGCGCCCTCTAATATGCTCTTCTCCGGGATGAAG 27865 28 71.4 0 AGC.........T....A..A...AT.. | ========== ====== ====== ====== ============================ ================================================================================================================================= ================== 45 28 96.1 35 GATTCAACCCCACATACGTGGGGACAAG # Left flank : CATGCTCATCATCACATGGGCCAAACCAACCCTCCCATGGGGCGTCGCCCCGTTCGGCTTCCAGGAACGCTATTTACTACCGCTCCTCCCATTGCTCGTCTTCACCACAAAACCAGAAACTTCCCTCTCAAAGTAAGGAGAAGAACCATGTCAGATCACACACTCCGCGGCTCAATCATTGGCAGCAAGTCCCTTGAATCCGACGAGAACATCGACCCAATCGAACGAGAAGAAGTCGCATACATATGTCCCAAAGGCCACGAGACCATAATCCCGTTCGCGGTTACGGCGGAAATCCCGGAGGCATGGGAATGCCGATGCGGAGCCGTTGCTCGACGAGAAGATGTTGACGACAGGTATTTCTACGGCGGGTACAAGCCGAAGAGAACACACTGGGATTTGCTGCTGGAACGCCGTACCGAGGAAGAGTTGCAGGAGGTTCTAGAAAAACGTCTGAAGATGCATCGCGAAGGTTGGATTCCCGACTACGAATAAATGGG # Right flank : GAGCAAAACCCGGGTTTCCGATCGGACAGTCACTCGCCGATGGTCGTTTAGAGTCTGATTCTGTCTTATGCTCCGAGTTCAGGATCCGACTGTGTCTGTCTTCGCTTGTGGGTCTTTTTCATGAGTAGTACTCCTTCATGGATTACGGGTTCGTATTTGGTGTTGATGTGACGGACGATGAAACCTTGTTCGGTGTGGGCTGGGACGACCATGCAGGCTCGTCCTTCTCCGATTTTCTTATCGATCTGATGCCATAGCTGGTCTCGTACTCTTGCGGAGATGTTGCCTACGTATAGGCCGGCGTCCAATTCGATAAGTCGGAGTCCGACGAGTCCTTTGAGACTGGGTGGGGCGGAGGTCAGGCGTACGACGCATAACATAGCCGCTCCTGGTTCCATCCCGACAGTACTTCGCCGGAGGCTCCGGCCCATAGGGTCATTTCCGGTTCGTTATCAGGCTCGTATGTCTTGTCTCCTTCCAAAAGGTCAAGTATGTCGTTT # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.18, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCAACCCCACATACGTGGGGACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 2 45277-40979 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFFM01000003.1 Bifidobacterium callitrichidarum strain TRI 5 DS8229454_c3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================================================================================================== ================== 45276 28 75.0 33 ..G..........TCG...A..A.T... ACACCGACGGCCAACATGCACCGGTCTTGCCAG 45215 28 96.4 33 .............A.............. ATGCCGAGAGCGACCGCCAAGGTGCCGTCCGTG G [45192] 45153 28 96.4 170 .............A.............. TTAAGGGGGCGGCCCTTGCAAGCCGCCCCCCCTTACGCCTTACTAAGAGATGTTTCCATACTCCCACGTCGATAAGAGCCACCGACAACCGGTGCTTCGACCGTCCTATCGACATCTCCATTATACGCAGGGACAAGCTAAGGATACCTAAACCGCGAAATACGAGAAAG 44955 28 92.9 34 .............T.G............ TTGAGGCATACTTGGATTCTCGTGATCAGGCTAA 44893 28 96.4 33 .............A.............. CTGTGCGTCCCGTGTGGATGCCGACACGTGAAG 44832 28 92.9 35 .............A.............A AGATATTCGCCCATTCCGTCGCGCTCCTCTGCGGA 44769 28 89.3 33 .............T.G........T... GCGCCAACACTCTGCGCGAGCTTGTCGAACTGG 44708 28 96.4 33 .............A.............. CGCCAACGGTTGGCCTCTACCCAGAACTGCCAA C [44701] 44646 28 96.4 33 .............A.............. ATGTGGATGATGCGATACGGGTGTTCCCTGAGT 44585 28 92.9 33 .............A..........T... GCACAGGCTCGCCATCTCGGACAGAGCCGGCTA 44524 28 85.7 33 .............T.G..C.....T... GGGTCATTCCAACTGGCCTCACCAACCCCGGCA 44463 28 92.9 33 .............A..........A... ATTCGGCTGACGGTTCGTCTTCGCTGCAGCGCG 44402 28 96.4 33 .............A.............. GAGACGCTTACCCTTACCGCCCTGCTCAATCTG 44341 28 96.4 33 .............A.............. TGTCCACTCTCGGACATTTGCATTCCATTTCCA 44280 28 96.4 33 .............A.............. GCTGGTCATCACCGGCAGTGACCTGGGCAGCGG 44219 28 96.4 33 .............A.............. GAAACCACCACAAGCACGATGTCGGATGAGGAA 44158 28 96.4 33 .............A.............. GGCTTGGATTCGGTCAAAGAGACCATGCTCAGA 44097 28 96.4 33 ...........................A CCGTCAGTCTAGTCCTTGTCGGGTGTGACGGTG 44036 28 96.4 33 .............A.............. CCTTGCAGTTCGGCGAGCTGCTTTTCCAGTTCG 43975 28 100.0 33 ............................ CGTGTCCGTACCGCCTGTGTCGGGCTGTTCCGG 43914 28 100.0 33 ............................ TGGAATCAAAAGTGGTTCTACTTTCGACATATA 43853 28 100.0 33 ............................ GGGTCCGTTGAGGAGTTCCATGAGCGTGTCGTG 43792 28 100.0 33 ............................ CAAGCGGCCTAGTCCGGCTTGCCAGTCGTCGTA 43731 28 100.0 33 ............................ ATCACCGCTGGAACAACAACCACCCTCAAACCG 43670 28 100.0 33 ............................ GCCGTAGACCTTGCGCTTGCTCGTGTAGCGACG 43609 28 100.0 33 ............................ GGTCCGGCCACAAGGCCGCGTAGACATCCAGTG 43548 28 100.0 33 ............................ GTGGGCCCTATTGATATGGGATGTGGAAGCATC 43487 28 100.0 33 ............................ TCTCGCATCGAAGTGGCGAATGTCTCGGCGAAA 43426 28 100.0 34 ............................ CGAGCAACTCGGCATCAAGCCTTGGATGGGCAAG 43364 28 100.0 33 ............................ CCACGGACTACACTGCACGGCATCCCTTCCGAG 43303 28 100.0 33 ............................ CCGTGAGCACTCCCCAGGAACTAGCTGCCTCAA 43242 28 100.0 33 ............................ CTCGCGGTGCGGTTCCATCCAAAAGACCAAGCA 43181 28 100.0 33 ............................ TCTCACACCCGGAATGGGGATGAAGTGAACTGA 43120 28 100.0 33 ............................ TTGATTCACCGGCGTACTCGCCCCGGTCAGGCG 43059 28 100.0 33 ............................ CGCACTCCAAGGTGCTGTAACCACACGGCGTAA 42998 28 100.0 33 ............................ CTGCGCAAATATGCCACTAATAATCAAGAGGGG 42937 28 100.0 33 ............................ GCAGTGGCGATAGGCGGGGTTGTCGCCGTGGCG 42876 28 100.0 33 ............................ CAGTTATCCAGGCGTCTACGAGGTCACCGAGAG 42815 28 100.0 33 ............................ GCCCGCCACATACCGAACACGAACCGATCAGGG 42754 28 100.0 33 ............................ CGCGTATACCTTTTTGTGGCATAGTCATCCACT 42693 28 100.0 34 ............................ ATACTCATTCGCTGAATCAATGCGTATCGTTATA 42631 28 100.0 33 ............................ GACGGGTTTGCTTTGGCCCATTGCTTGCGATCG 42570 28 100.0 33 ............................ TGGTCGGATACCGGTTCAGCCAGTGTCCAGAAG 42509 28 100.0 33 ............................ AATGGCGAACGCCGCCATGCTTCTACGCGCAAG 42448 28 100.0 33 ............................ TCGGCTAGCGCGGTCTCGAAGTCGTTTCGCCTG 42387 28 100.0 33 ............................ ATTATGCCCACATTGGTCTTGAGGTCTGTTTGG 42326 28 100.0 33 ............................ GGGCTTCCACCTGTGCTTCGCGTAAGTGTTCCG 42265 28 100.0 33 ............................ CCACAGCAAGTTCGTCCGCGTCAAGGCCGATGG 42204 28 100.0 33 ............................ CCTGTTCCGCAAGTTCGGCTGCCTTTAGCCTGA 42143 28 100.0 33 ............................ CCTGAAAATGAAGGCGTTGATTCTTTCCACCCA 42082 28 100.0 34 ............................ CCCACAACCCAGCGTGTGCCTGCCAGCACTTTGG 42020 28 100.0 33 ............................ ATACGATGCAGAAAGTATTTGCCTCTTATCCGG 41959 28 100.0 33 ............................ CAAGATGGTAGCGACCTAGGTTTTACCCAGAGA 41898 28 100.0 33 ............................ GCTGCTGGGTTAGGGCTTGCACTTCTTGCACTG 41837 28 100.0 33 ............................ TCCGCTCAAATGAGAGGGATTGGCGGATCTACA 41776 28 100.0 33 ............................ CCATGCATGAGCCAATCAAGGCCGCGCCTTGGG 41715 28 100.0 33 ............................ TTACCGGTAAGGCAGATGGCGTATATGGTCGAG 41654 28 100.0 33 ............................ CCGCACTGGAATGGCCTAACTGGTTCGAAACCG 41593 28 100.0 33 ............................ ACGTCTGGTGCAATCGTGGTATGACGACAAGGA 41532 28 100.0 33 ............................ TGGCAGAGTCCATGCTTGGAAAATGGAATTACG 41471 28 100.0 33 ............................ CGGTAATTTTTCGATTGTTCCAGCCGTTACCGG 41410 28 100.0 36 ............................ TCTTGACCGGAGTGGTCGGCGTCGCCCAAGCAGGAG 41346 28 100.0 33 ............................ TCTGGGGCGAGGTGCTGCACCATTGCATACCAG 41285 28 100.0 33 ............................ CTGAACGCGGCCTCTTCCGGCAAGCCCACACTC 41224 28 100.0 34 ............................ TTTGGTATGGGCGGGTATACATGGCTTGCAAAAA 41162 28 100.0 126 ............................ AGCAGAGAAACGGCGGAATTCCAACGGTCTGTTTTTGGAAAATGCGTGTTTTTCCGTCGAACGACAGTGGGTTTTCCGTTTTCTCTACTTATAGAGGCGCCCTATCATCCCTGTATCCGGCGTACA 41008 28 82.1 0 .GG..........A......A...G... | GT [40982] ========== ====== ====== ====== ============================ ========================================================================================================================================================================== ================== 67 28 97.9 37 GATTCAACCCCACGTACGTGGGGACAAG # Left flank : TGCCTGTATTCGGACGGCCTGGATCCCCTCGGCAAGGTGGACACCAATTCAGGAATTACAAGACCATTTTCGGATTGCTCTCGGATAATCCCCGAATAAGCATCTGCAGCCTGTGTTTCAAACAGTGGACTGATCTTGCCGACATCATGAATCGAAGCAAGAAACATCAGGGTTGGCATCGCATTAGATGAGCCAAGGCAATCATCTAATCTCGCTTTTACATTGCTGGGTATCCACTCATTCCAGATAAGGGATGCGGTTTCGGCAGTGTCGGTCAAATGAGTCGAAAGGGGAAGCCATTTCCCGGGGTTGCTGGTTTCCTGATCGGTTTTACCCCAAATCGGTATAGTGCTTGTGTTCATCGAACCTCTCATAATGTGTATACATTTACAGTATATCACTATTGACGCCAATGACATCAAGCCCGACGAACCAAATCCAAAAAGAACCAAAACACACTTACATGAGATAATTCGATAGTCACGGAATGTCGCGTAAGA # Right flank : CAAAACCGGATTTAGGATCCACTCGGTCATGTCGGTGGAAACTTTCTTTAGTCTCGGGGATGCTGTCTTATGCTTCGAGTTCAGACCCCGAGGATTGGTCTTCGTTTGGGCAGCTGTGTGTTCTTGCCATTTCGTATCGTGTGCATGTCTTCAGTATATCACACATATGGACTATCTCATAACCACCAAGATAGCTCTTAGTAAGAAAGGAACGCTACGATGAGGTATTTACCACTCCTGACGATCATCCTCGTTCTTTTAATCGATGTAGCCGGTATCATCACGCTCATGCACAAGAACTTCGATCGAAGACCGCTCCTGGGTCCAGTGACGGTTTCTTTCCTGGTCTCCGCGGGGGCCATATGCGTAATGGCATTAATCGTACTATCGGTGTTCTATATCAATTTCCCGTAAGCGTTTCAGCAAAGGGAACATTTCGGTAATAGGCCTTGGTTTATTATTGGCTTGATGCAAATTTATGCAGATTTGAAATGTAAGTT # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.30, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCAACCCCACGTACGTGGGGACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.80,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-40] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA //